Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:07:03 (531221): wrapper (7.7.26015): starting
01:07:03 (531221): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 01:07:03] Arguments: --nthreads 12
[2026-01-26 01:07:03] Threads: 12
[2026-01-26 01:07:03] Checking for CVMFS
[2026-01-26 01:07:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 01:07:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 01:07:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 01:07:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 01:07:05] 2.13.0.0 88587 1735 23424 155526 3 1 80035909 82903040 0 130560 0 120316 99.947 13510 698 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 01:07:05] CVMFS is ok
[2026-01-26 01:07:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 01:07:05] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 01:07:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 01:07:05] Further information can be found at the LHC@home message board.
[2026-01-26 01:07:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 01:07:05] Checking for apptainer binary...
[2026-01-26 01:07:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 01:07:05] Running /usr/bin/apptainer --version
[2026-01-26 01:07:05] apptainer version 1.4.5
[2026-01-26 01:07:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 01:07:05] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2026-01-26 01:07:05] apptainer works
[2026-01-26 01:07:05] Set ATHENA_PROC_NUMBER=12
[2026-01-26 01:07:05] Set ATHENA_CORE_NUMBER=12
[2026-01-26 01:07:05] Starting ATLAS job with PandaID=6983449526
[2026-01-26 01:07:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 01:51:27]  *** The last 200 lines of the pilot log: ***
[2026-01-26 01:51:27]  filesize=345049
[2026-01-26 01:51:27]  filetype=log
[2026-01-26 01:51:27]  guid=bcd5a7fb-50f6-46f0-a706-42ed7c8b83c1
[2026-01-26 01:51:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 01:51:27]  is_altstaged=None
[2026-01-26 01:51:27]  is_tar=False
[2026-01-26 01:51:27]  lfn=log.48329421._000003.job.log.tgz.1
[2026-01-26 01:51:27]  mtime=0
[2026-01-26 01:51:27]  protocol_id=None
[2026-01-26 01:51:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 01:51:27]  replicas=None
[2026-01-26 01:51:27]  scope=mc23_13p6TeV
[2026-01-26 01:51:27]  status=None
[2026-01-26 01:51:27]  status_code=0
[2026-01-26 01:51:27]  storage_token=
[2026-01-26 01:51:27]  surl=/var/lib/boinc-client/slots/9/PanDA_Pilot-6983449526/log.48329421._000003.job.log.tgz.1
[2026-01-26 01:51:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/45/log.48329421._000003.job.log.tgz.1
[2026-01-26 01:51:27]  workdir=None
[2026-01-26 01:51:27] ]
[2026-01-26 01:51:27] 2026-01-26 01:50:54,408 | INFO     | transferring file log.48329421._000003.job.log.tgz.1 from /var/lib/boinc-client/slots/9/PanDA_Pilot-6983449526/log.48329421._000003.job.log.tgz.1 to /var/lib/boinc
[2026-01-26 01:51:27] 2026-01-26 01:50:54,408 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/9/PanDA_Pilot-6983449526/log.48329421._000003.job.log.tgz.1 /var/lib/boinc-client/slots/9/log.483294
[2026-01-26 01:51:27] 2026-01-26 01:50:54,422 | INFO     | adding to output.list: log.48329421._000003.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/45/log.48329421._000003.job.log.tg
[2026-01-26 01:51:27] 2026-01-26 01:50:54,423 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 01:51:27] 2026-01-26 01:50:54,423 | INFO     | summary of transferred files:
[2026-01-26 01:51:27] 2026-01-26 01:50:54,423 | INFO     |  -- lfn=log.48329421._000003.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 01:51:27] 2026-01-26 01:50:54,424 | INFO     | stage-out finished correctly
[2026-01-26 01:51:27] 2026-01-26 01:50:55,298 | INFO     | PID=534945 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 01:51:27] 2026-01-26 01:50:55,324 | INFO     | monitor loop #203: job 0:6983449526 is in state 'finished'
[2026-01-26 01:51:27] 2026-01-26 01:50:55,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,299 | INFO     | time since job start (2618s) is within the limit (349056.0s)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,437 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 01:51:27] 2026-01-26 01:50:56,468 | INFO     | job 6983449526 has state=finished
[2026-01-26 01:51:27] 2026-01-26 01:50:56,468 | INFO     | preparing for final server update for job 6983449526 in state='finished'
[2026-01-26 01:51:27] 2026-01-26 01:50:56,468 | INFO     | reading metadata from: /var/lib/boinc-client/slots/9/PanDA_Pilot-6983449526/jobReport.json
[2026-01-26 01:51:27] 2026-01-26 01:50:56,470 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/9/workernode_map.json
[2026-01-26 01:51:27] 2026-01-26 01:50:56,470 | INFO     | this job has now completed (state=finished)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,470 | INFO     | log transfer has been attempted: DONE
[2026-01-26 01:51:27] 2026-01-26 01:50:56,470 | INFO     | job 6983449526 has finished - writing final server update
[2026-01-26 01:51:27] 2026-01-26 01:50:56,471 | INFO     | total number of processed events: 400 (read)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,472 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6983449526/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,472 | INFO     | extracted standard info from prmon json
[2026-01-26 01:51:27] 2026-01-26 01:50:56,472 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 01:51:27] 2026-01-26 01:50:56,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 01:51:27] 2026-01-26 01:50:56,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 01:51:27] 2026-01-26 01:50:56,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 01:51:27] 2026-01-26 01:50:56,473 | INFO     | fitting pss+swap vs Time
[2026-01-26 01:51:27] 2026-01-26 01:50:56,473 | INFO     | sum of square deviations: 14456085.0
[2026-01-26 01:51:27] 2026-01-26 01:50:56,473 | INFO     | sum of deviations: -1092276248.0
[2026-01-26 01:51:27] 2026-01-26 01:50:56,473 | INFO     | mean x: 1769391027.5
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | mean y: 2777372.5555555555
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | intersect: 133694838035.07689
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | chi2: 0.04520161170980628
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | current memory leak: -75.56 B/s (using 36 data points, chi2=0.05)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | could have reported an average CPU frequency of 3699 MHz (5 samples)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | ..............................
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . Timing measurements:
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . get job = 0 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . initial setup = 3 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . payload setup = 3 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . stage-in = 0 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . payload execution = 2597 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . stage-out = 0 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | . log creation = 0 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,474 | INFO     | ..............................
[2026-01-26 01:51:27] 2026-01-26 01:50:56,517 | INFO     | 
[2026-01-26 01:51:27] 2026-01-26 01:50:56,518 | INFO     | job summary report
[2026-01-26 01:51:27] 2026-01-26 01:50:56,518 | INFO     | --------------------------------------------------
[2026-01-26 01:51:27] 2026-01-26 01:50:56,518 | INFO     | PanDA job id: 6983449526
[2026-01-26 01:51:27] 2026-01-26 01:50:56,518 | INFO     | task id: 48329421
[2026-01-26 01:51:27] 2026-01-26 01:50:56,518 | INFO     | errors: (none)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,518 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | pilot state: finished 
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | transexitcode: 0
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | exeerrorcode: 0
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | exeerrordiag: 
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | exitcode: 0
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | exitmsg: OK
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | cpuconsumptiontime: 26379 s
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | nevents: 400
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | neventsw: 0
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | pid: 539586
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | pgrp: 539586
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | corecount: 12
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | event service: False
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | sizes: {0: 2284351, 10: 2284351, 2605: 2309550, 2606: 2318562, 2608: 2318844}
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | --------------------------------------------------
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | 
[2026-01-26 01:51:27] 2026-01-26 01:50:56,519 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | job 6983449526 has completed (purged errors)
[2026-01-26 01:51:27] 2026-01-26 01:50:56,542 | INFO     | overall cleanup function is called
[2026-01-26 01:51:27] 2026-01-26 01:50:57,547 | INFO     | --- collectZombieJob: --- 10, [539586]
[2026-01-26 01:51:27] 2026-01-26 01:50:57,547 | INFO     | zombie collector waiting for pid 539586
[2026-01-26 01:51:27] 2026-01-26 01:50:57,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 01:51:27] 2026-01-26 01:50:57,547 | INFO     | collected zombie processes
[2026-01-26 01:51:27] 2026-01-26 01:50:57,547 | INFO     | will attempt to kill all subprocesses of pid=539586
[2026-01-26 01:51:27] 2026-01-26 01:50:57,577 | INFO     | process IDs to be killed: [539586] (in reverse order)
[2026-01-26 01:51:27] 2026-01-26 01:50:57,612 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 01:51:27] 2026-01-26 01:50:57,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 01:51:27] 2026-01-26 01:50:57,615 | INFO     | did not find any defunct processes belonging to 539586
[2026-01-26 01:51:27] 2026-01-26 01:50:57,617 | INFO     | did not find any defunct processes belonging to 539586
[2026-01-26 01:51:27] 2026-01-26 01:50:57,617 | INFO     | ready for new job
[2026-01-26 01:51:27] 2026-01-26 01:50:57,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 01:51:27] 2026-01-26 01:50:57,618 | INFO     | **************************************
[2026-01-26 01:51:27] 2026-01-26 01:50:57,618 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 01:51:27] 2026-01-26 01:50:57,618 | INFO     | **************************************
[2026-01-26 01:51:27] 2026-01-26 01:50:57,618 | INFO     | 
[2026-01-26 01:51:27] 2026-01-26 01:50:57,618 | INFO     | architecture information:
[2026-01-26 01:51:27] 2026-01-26 01:50:57,618 | INFO     | executing command: cat /etc/os-release
[2026-01-26 01:51:27] 2026-01-26 01:50:57,634 | INFO     | cat /etc/os-release:
[2026-01-26 01:51:27] NAME="CentOS Linux"
[2026-01-26 01:51:27] VERSION="7 (Core)"
[2026-01-26 01:51:27] ID="centos"
[2026-01-26 01:51:27] ID_LIKE="rhel fedora"
[2026-01-26 01:51:27] VERSION_ID="7"
[2026-01-26 01:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 01:51:27] ANSI_COLOR="0;31"
[2026-01-26 01:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 01:51:27] HOME_URL="https://www.centos.org/"
[2026-01-26 01:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 01:51:27] 
[2026-01-26 01:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 01:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 01:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 01:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 01:51:27] 
[2026-01-26 01:51:27] 2026-01-26 01:50:57,635 | INFO     | **************************************
[2026-01-26 01:51:27] 2026-01-26 01:50:58,137 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2026-01-26 01:51:27] 2026-01-26 01:50:58,154 | INFO     | sufficient remaining disk space (624134455296 B)
[2026-01-26 01:51:27] 2026-01-26 01:50:58,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 01:51:27] 2026-01-26 01:50:58,154 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 01:51:27] 2026-01-26 01:50:58,154 | INFO     | update_server=False
[2026-01-26 01:51:27] 2026-01-26 01:50:58,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 01:51:27] 2026-01-26 01:50:58,155 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 01:51:27] 2026-01-26 01:50:58,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 01:51:27] 2026-01-26 01:50:58,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 01:51:27] 2026-01-26 01:50:58,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 01:51:27] 2026-01-26 01:50:58,155 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 01:51:27] 2026-01-26 01:50:58,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 01:51:27] 2026-01-26 01:50:58,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 01:51:27] 2026-01-26 01:50:58,392 | INFO     | all data control threads have been joined
[2026-01-26 01:51:27] 2026-01-26 01:50:58,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 01:51:27] 2026-01-26 01:50:58,832 | INFO     | aborting loop
[2026-01-26 01:51:27] 2026-01-26 01:50:59,160 | INFO     | [job] retrieve thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:50:59,160 | INFO     | [job] queue monitor thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:50:59,234 | INFO     | [data] copytool_in thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:50:59,279 | INFO     | all payload control threads have been joined
[2026-01-26 01:51:27] 2026-01-26 01:50:59,397 | INFO     | [data] control thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:50:59,497 | INFO     | all job control threads have been joined
[2026-01-26 01:51:27] 2026-01-26 01:50:59,537 | INFO     | [payload] failed_post thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:50:59,837 | INFO     | [job] job monitor thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,116 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,161 | INFO     | [data] copytool_out thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,284 | INFO     | [payload] control thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,502 | INFO     | [job] control thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,524 | INFO     | [job] validate thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,538 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,560 | INFO     | [payload] validate_post thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:00,572 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:02,161 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:08,266 | INFO     | job.realtimelogging is not enabled
[2026-01-26 01:51:27] 2026-01-26 01:51:09,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 01:51:27] 2026-01-26 01:51:21,831 | INFO     | [monitor] cgroup control has ended
[2026-01-26 01:51:27] 2026-01-26 01:51:22,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125479713240896)>', '<ExcThread(monitor, started 125479080163072)>']
[2026-01-26 01:51:27] 2026-01-26 01:51:23,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 01:51:27] 2026-01-26 01:51:23,283 | INFO     | [monitor] control thread has ended
[2026-01-26 01:51:27] 2026-01-26 01:51:27,473 | INFO     | all workflow threads have been joined
[2026-01-26 01:51:27] 2026-01-26 01:51:27,473 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 01:51:27] 2026-01-26 01:51:27,473 | INFO     | traces error code: 0
[2026-01-26 01:51:27] 2026-01-26 01:51:27,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 01:51:27] 2026-01-26 01:51:27,614 [wrapper] ==== pilot stdout END ====
[2026-01-26 01:51:27] 2026-01-26 01:51:27,615 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 01:51:27] 2026-01-26 01:51:27,618 [wrapper] pilotpid: 534945
[2026-01-26 01:51:27] 2026-01-26 01:51:27,619 [wrapper] Pilot exit status: 0
[2026-01-26 01:51:27] 2026-01-26 01:51:27,625 [wrapper] pandaids: 6983449526
[2026-01-26 01:51:27] 2026-01-26 01:51:27,645 [wrapper] cleanup supervisor_pilot  550591 534946
[2026-01-26 01:51:27] 2026-01-26 01:51:27,647 [wrapper] Test setup, not cleaning
[2026-01-26 01:51:27] 2026-01-26 01:51:27,648 [wrapper] apfmon messages muted
[2026-01-26 01:51:27] 2026-01-26 01:51:27,649 [wrapper] ==== wrapper stdout END ====
[2026-01-26 01:51:27] 2026-01-26 01:51:27,650 [wrapper] ==== wrapper stderr END ====
[2026-01-26 01:51:27]  *** Error codes and diagnostics ***
[2026-01-26 01:51:27]     "exeErrorCode": 0,
[2026-01-26 01:51:27]     "exeErrorDiag": "",
[2026-01-26 01:51:27]     "pilotErrorCode": 0,
[2026-01-26 01:51:27]     "pilotErrorDiag": "",
[2026-01-26 01:51:27]  *** Listing of results directory ***
[2026-01-26 01:51:27] total 449928
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc    584422 Jan 25 20:48 pilot3.tar.gz
[2026-01-26 01:51:27] -rwx------ 1 boinc boinc     36322 Jan 25 20:49 runpilot2-wrapper.sh
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc      5111 Jan 25 20:51 queuedata.json
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc       100 Jan 26 01:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 01:51:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 01:07 run_atlas
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc       105 Jan 26 01:07 job.xml
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc      9904 Jan 26 01:07 init_data.xml
[2026-01-26 01:51:27] -rw-r--r-- 2 boinc boinc 273131555 Jan 26 01:07 EVNT.48329419._000001.pool.root.1
[2026-01-26 01:51:27] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:07 start_atlas.sh
[2026-01-26 01:51:27] drwxrwx--x 2 boinc boinc      4096 Jan 26 01:07 shared
[2026-01-26 01:51:27] -rw-r--r-- 2 boinc boinc    597766 Jan 26 01:07 input.tar.gz
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc         0 Jan 26 01:07 boinc_lockfile
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc      2601 Jan 26 01:07 pandaJob.out
[2026-01-26 01:51:27] -rw------- 1 boinc boinc   1004246 Jan 26 01:07 agis_schedconf.cvmfs.json
[2026-01-26 01:51:27] -rw------- 1 boinc boinc   1516246 Jan 26 01:07 agis_ddmendpoints.agis.ALL.json
[2026-01-26 01:51:27] -rw------- 1 boinc boinc       420 Jan 26 01:07 workernode_map.json
[2026-01-26 01:51:27] drwx------ 5 boinc boinc      4096 Jan 26 01:07 pilot3
[2026-01-26 01:51:27] -rw------- 1 boinc boinc 182142674 Jan 26 01:50 HITS.48329421._000003.pool.root.1
[2026-01-26 01:51:27] -rw------- 1 boinc boinc        95 Jan 26 01:50 pilot_heartbeat.json
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc       529 Jan 26 01:50 boinc_task_state.xml
[2026-01-26 01:51:27] -rw------- 1 boinc boinc      1036 Jan 26 01:50 memory_monitor_summary.json
[2026-01-26 01:51:27] -rw------- 1 boinc boinc    345049 Jan 26 01:50 log.48329421._000003.job.log.tgz.1
[2026-01-26 01:51:27] -rw------- 1 boinc boinc      6292 Jan 26 01:50 heartbeat.json
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc      8192 Jan 26 01:51 boinc_mmap_file
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc        27 Jan 26 01:51 wrapper_checkpoint.txt
[2026-01-26 01:51:27] -rw------- 1 boinc boinc      4628 Jan 26 01:51 pilotlog.txt
[2026-01-26 01:51:27] -rw------- 1 boinc boinc    407949 Jan 26 01:51 log.48329421._000003.job.log.1
[2026-01-26 01:51:27] -rw------- 1 boinc boinc       357 Jan 26 01:51 output.list
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc       620 Jan 26 01:51 runtime_log
[2026-01-26 01:51:27] -rw------- 1 boinc boinc    768000 Jan 26 01:51 result.tar.gz
[2026-01-26 01:51:27] -rw------- 1 boinc boinc       649 Jan 26 01:51 UBrLDmKEM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWn1KDmcJoiGo.diag
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc      9046 Jan 26 01:51 runtime_log.err
[2026-01-26 01:51:27] -rw-r--r-- 1 boinc boinc     21448 Jan 26 01:51 stderr.txt
[2026-01-26 01:51:27] HITS file was successfully produced:
[2026-01-26 01:51:27] -rw------- 1 boinc boinc 182142674 Jan 26 01:50 shared/HITS.pool.root.1
[2026-01-26 01:51:27]  *** Contents of shared directory: ***
[2026-01-26 01:51:27] total 445968
[2026-01-26 01:51:27] -rw-r--r-- 2 boinc boinc 273131555 Jan 26 01:07 ATLAS.root_0
[2026-01-26 01:51:27] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:07 start_atlas.sh
[2026-01-26 01:51:27] -rw-r--r-- 2 boinc boinc    597766 Jan 26 01:07 input.tar.gz
[2026-01-26 01:51:27] -rw------- 1 boinc boinc 182142674 Jan 26 01:50 HITS.pool.root.1
[2026-01-26 01:51:27] -rw------- 1 boinc boinc    768000 Jan 26 01:51 result.tar.gz
01:51:28 (531221): run_atlas exited; CPU time 26311.768575
01:51:28 (531221): called boinc_finish(0)

</stderr_txt>
]]>

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