Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:18:06 (30817): wrapper (7.7.26015): starting
09:18:06 (30817): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 09:18:06] Arguments: --nthreads 8
[2026-01-26 09:18:06] Threads: 8
[2026-01-26 09:18:06] Checking for CVMFS
[2026-01-26 09:18:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:18:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:18:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:18:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:18:08] 2.11.2.0 12336 59627 133204 155540 3 202 18741831 25165824 3558 130560 0 22598581 99.797 17074272 3712 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 09:18:08] CVMFS is ok
[2026-01-26 09:18:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:18:08] Checking for apptainer binary...
[2026-01-26 09:18:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:18:08] Running /usr/bin/apptainer --version
[2026-01-26 09:18:08] apptainer version 1.3.2-1.el7
[2026-01-26 09:18:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:18:09] cg-vwn469.simple-grid.lan
[2026-01-26 09:18:09] apptainer works
[2026-01-26 09:18:09] Set ATHENA_PROC_NUMBER=8
[2026-01-26 09:18:09] Set ATHENA_CORE_NUMBER=8
[2026-01-26 09:18:10] Starting ATLAS job with PandaID=6983450137
[2026-01-26 09:18:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:50:18]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:50:18] 2026-01-26 12:49:29,777 | INFO     | job 6983450137 has state=finished
[2026-01-26 13:50:18] 2026-01-26 12:49:29,777 | INFO     | preparing for final server update for job 6983450137 in state='finished'
[2026-01-26 13:50:18] 2026-01-26 12:49:30,524 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,525 | INFO     | reading metadata from: /var/lib/boinc/slots/6/PanDA_Pilot-6983450137/jobReport.json
[2026-01-26 13:50:18] 2026-01-26 12:49:30,527 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-01-26 13:50:18] 2026-01-26 12:49:30,528 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,528 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:50:18] 2026-01-26 12:49:30,528 | INFO     | job 6983450137 has finished - writing final server update
[2026-01-26 13:50:18] 2026-01-26 12:49:30,528 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,530 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6983450137/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,531 | INFO     | extracted standard info from prmon json
[2026-01-26 13:50:18] 2026-01-26 12:49:30,531 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:50:18] 2026-01-26 12:49:30,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:50:18] 2026-01-26 12:49:30,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:50:18] 2026-01-26 12:49:30,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:50:18] 2026-01-26 12:49:30,537 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:50:18] 2026-01-26 12:49:30,537 | INFO     | sum of square deviations: 5836025702.5
[2026-01-26 13:50:18] 2026-01-26 12:49:30,540 | INFO     | sum of deviations: -38160292800.49998
[2026-01-26 13:50:18] 2026-01-26 12:49:30,540 | INFO     | mean x: 1769423647.5
[2026-01-26 13:50:18] 2026-01-26 12:49:30,540 | INFO     | mean y: 2538026.409774436
[2026-01-26 13:50:18] 2026-01-26 12:49:30,540 | INFO     | intersect: 11572350758.352358
[2026-01-26 13:50:18] 2026-01-26 12:49:30,540 | INFO     | chi2: 1.7438950121837775
[2026-01-26 13:50:18] 2026-01-26 12:49:30,541 | INFO     | sum of square deviations: 5513070810.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,543 | INFO     | sum of deviations: -37259790396.00001
[2026-01-26 13:50:18] 2026-01-26 12:49:30,543 | INFO     | mean x: 1769423495.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,544 | INFO     | mean y: 2538452.4942528736
[2026-01-26 13:50:18] 2026-01-26 12:49:30,544 | INFO     | intersect: 11961091284.04364
[2026-01-26 13:50:18] 2026-01-26 12:49:30,544 | INFO     | chi2: 1.7416851871266832
[2026-01-26 13:50:18] 2026-01-26 12:49:30,544 | INFO     | current chi2=1.7416851871266832 (change=0.12671778069524342 %)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,544 | INFO     | right removable region: 260
[2026-01-26 13:50:18] 2026-01-26 12:49:30,545 | INFO     | sum of square deviations: 5513070810.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,547 | INFO     | sum of deviations: -78467814820.00002
[2026-01-26 13:50:18] 2026-01-26 12:49:30,547 | INFO     | mean x: 1769423800.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,547 | INFO     | mean y: 2556891.8160919542
[2026-01-26 13:50:18] 2026-01-26 12:49:30,548 | INFO     | intersect: 25186855055.49245
[2026-01-26 13:50:18] 2026-01-26 12:49:30,548 | INFO     | chi2: 0.28225842225032743
[2026-01-26 13:50:18] 2026-01-26 12:49:30,548 | INFO     | current chi2=0.28225842225032743 (change=83.81448308078639 %)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,549 | INFO     | sum of square deviations: 5202255680.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,551 | INFO     | sum of deviations: -76925852977.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,551 | INFO     | mean x: 1769423952.5
[2026-01-26 13:50:18] 2026-01-26 12:49:30,551 | INFO     | mean y: 2556108.3515625
[2026-01-26 13:50:18] 2026-01-26 12:49:30,551 | INFO     | intersect: 26167061506.90153
[2026-01-26 13:50:18] 2026-01-26 12:49:30,552 | INFO     | chi2: 0.2640505332097243
[2026-01-26 13:50:18] 2026-01-26 12:49:30,552 | INFO     | current chi2=0.2640505332097243 (change=6.450786798650429 %)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,552 | INFO     | left removable region: 20
[2026-01-26 13:50:18] 2026-01-26 12:49:30,552 | INFO     | sum of square deviations: 4286517580.0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,554 | INFO     | sum of deviations: -59092222499.00001
[2026-01-26 13:50:18] 2026-01-26 12:49:30,555 | INFO     | mean x: 1769424074.5
[2026-01-26 13:50:18] 2026-01-26 12:49:30,555 | INFO     | mean y: 2548377.075
[2026-01-26 13:50:18] 2026-01-26 12:49:30,555 | INFO     | intersect: 24395123271.271786
[2026-01-26 13:50:18] 2026-01-26 12:49:30,555 | INFO     | chi2: 0.24389895737192813
[2026-01-26 13:50:18] 2026-01-26 12:49:30,555 | INFO     | current memory leak: -13.79 B/s (using 240 data points, chi2=0.24)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,556 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,556 | INFO     | ..............................
[2026-01-26 13:50:18] 2026-01-26 12:49:30,556 | INFO     | . Timing measurements:
[2026-01-26 13:50:18] 2026-01-26 12:49:30,556 | INFO     | . get job = 0 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | . initial setup = 9 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | . payload setup = 10 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | . stage-in = 0 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | . payload execution = 16225 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | . stage-out = 1 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | . log creation = 0 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,557 | INFO     | ..............................
[2026-01-26 13:50:18] 2026-01-26 12:49:30,674 | INFO     | 
[2026-01-26 13:50:18] 2026-01-26 12:49:30,674 | INFO     | job summary report
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | --------------------------------------------------
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | PanDA job id: 6983450137
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | task id: 48298567
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | errors: (none)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | pilot state: finished 
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | transexitcode: 0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | exeerrorcode: 0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | exeerrordiag: 
[2026-01-26 13:50:18] 2026-01-26 12:49:30,675 | INFO     | exitcode: 0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | exitmsg: OK
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | cpuconsumptiontime: 64290 s
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | nevents: 400
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | neventsw: 0
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | pid: 6920
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | pgrp: 6920
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | corecount: 8
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | event service: False
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | sizes: {0: 2283932, 1: 2284393, 16239: 2315851, 16242: 2324849, 16243: 2324905, 16245: 2325099}
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | --------------------------------------------------
[2026-01-26 13:50:18] 2026-01-26 12:49:30,676 | INFO     | 
[2026-01-26 13:50:18] 2026-01-26 12:49:30,677 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-26 13:50:18] 2026-01-26 12:49:30,711 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:50:18] 2026-01-26 12:49:30,713 | INFO     | job 6983450137 has completed (purged errors)
[2026-01-26 13:50:18] 2026-01-26 12:49:30,714 | INFO     | overall cleanup function is called
[2026-01-26 13:50:18] 2026-01-26 12:49:31,723 | INFO     | --- collectZombieJob: --- 10, [6920]
[2026-01-26 13:50:18] 2026-01-26 12:49:31,723 | INFO     | zombie collector waiting for pid 6920
[2026-01-26 13:50:18] 2026-01-26 12:49:31,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:50:18] 2026-01-26 12:49:31,723 | INFO     | collected zombie processes
[2026-01-26 13:50:18] 2026-01-26 12:49:31,724 | INFO     | will attempt to kill all subprocesses of pid=6920
[2026-01-26 13:50:18] 2026-01-26 12:49:31,823 | INFO     | process IDs to be killed: [6920] (in reverse order)
[2026-01-26 13:50:18] 2026-01-26 12:49:32,161 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:50:18] 2026-01-26 12:49:32,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:50:18] 2026-01-26 12:49:32,165 | INFO     | did not find any defunct processes belonging to 6920
[2026-01-26 13:50:18] 2026-01-26 12:49:32,167 | INFO     | did not find any defunct processes belonging to 6920
[2026-01-26 13:50:18] 2026-01-26 12:49:32,167 | INFO     | ready for new job
[2026-01-26 13:50:18] 2026-01-26 12:49:32,167 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:50:18] 2026-01-26 12:49:32,169 | INFO     | **************************************
[2026-01-26 13:50:18] 2026-01-26 12:49:32,169 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:50:18] 2026-01-26 12:49:32,170 | INFO     | **************************************
[2026-01-26 13:50:18] 2026-01-26 12:49:32,170 | INFO     | 
[2026-01-26 13:50:18] 2026-01-26 12:49:32,170 | INFO     | pilot is running in a VM
[2026-01-26 13:50:18] 2026-01-26 12:49:32,170 | INFO     | architecture information:
[2026-01-26 13:50:18] 2026-01-26 12:49:32,171 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:50:18] 2026-01-26 12:49:32,307 | INFO     | cat /etc/os-release:
[2026-01-26 13:50:18] NAME="CentOS Linux"
[2026-01-26 13:50:18] VERSION="7 (Core)"
[2026-01-26 13:50:18] ID="centos"
[2026-01-26 13:50:18] ID_LIKE="rhel fedora"
[2026-01-26 13:50:18] VERSION_ID="7"
[2026-01-26 13:50:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:50:18] ANSI_COLOR="0;31"
[2026-01-26 13:50:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:50:18] HOME_URL="https://www.centos.org/"
[2026-01-26 13:50:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:50:18] 
[2026-01-26 13:50:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:50:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:50:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:50:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:50:18] 
[2026-01-26 13:50:18] 2026-01-26 12:49:32,308 | INFO     | **************************************
[2026-01-26 13:50:18] 2026-01-26 12:49:32,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-26 13:50:18] 2026-01-26 12:49:32,843 | INFO     | sufficient remaining disk space (497454940160 B)
[2026-01-26 13:50:18] 2026-01-26 12:49:32,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:50:18] 2026-01-26 12:49:32,843 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:50:18] 2026-01-26 12:49:32,843 | INFO     | update_server=False
[2026-01-26 13:50:18] 2026-01-26 12:49:32,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:50:18] 2026-01-26 12:49:32,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:50:18] 2026-01-26 12:49:32,909 | INFO     | all job control threads have been joined
[2026-01-26 13:50:18] 2026-01-26 12:49:33,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:50:18] 2026-01-26 12:49:33,111 | INFO     | aborting loop
[2026-01-26 13:50:18] 2026-01-26 12:49:33,849 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:33,912 | INFO     | all data control threads have been joined
[2026-01-26 13:50:18] 2026-01-26 12:49:33,915 | INFO     | [job] control thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:33,923 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,011 | INFO     | [job] validate thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,113 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,130 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,183 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,211 | INFO     | all payload control threads have been joined
[2026-01-26 13:50:18] 2026-01-26 12:49:34,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:50:18] 2026-01-26 12:49:34,408 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,649 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,788 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,851 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:34,918 | INFO     | [data] control thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:35,188 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:35,218 | INFO     | [payload] control thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:35,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:50:18] 2026-01-26 12:49:36,696 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:49:38,362 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:50:18] 2026-01-26 12:50:02,773 | INFO     | PID=2482 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 13:50:18] 2026-01-26 12:50:02,774 | INFO     | .. there are 8 such processes running
[2026-01-26 13:50:18] 2026-01-26 12:50:02,774 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:50:18] 2026-01-26 12:50:02,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:50:18] 2026-01-26 12:50:02,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:50:18] 2026-01-26 12:50:11,858 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:50:18] 2026-01-26 12:50:13,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704788309824)>', '<ExcThread(monitor, started 139704070563584)>']
[2026-01-26 13:50:18] 2026-01-26 12:50:13,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:50:18] 2026-01-26 12:50:13,826 | INFO     | [monitor] control thread has ended
[2026-01-26 13:50:18] 2026-01-26 12:50:18,111 | INFO     | all workflow threads have been joined
[2026-01-26 13:50:18] 2026-01-26 12:50:18,111 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:50:18] 2026-01-26 12:50:18,111 | INFO     | traces error code: 0
[2026-01-26 13:50:18] 2026-01-26 12:50:18,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:50:18] 2026-01-26 12:50:18,266 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:50:18] 2026-01-26 12:50:18,269 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:50:18] 2026-01-26 12:50:18,272 [wrapper] pilotpid: 2482
[2026-01-26 13:50:18] 2026-01-26 12:50:18,276 [wrapper] Pilot exit status: 0
[2026-01-26 13:50:18] 2026-01-26 12:50:18,293 [wrapper] pandaids: 6983450137
[2026-01-26 13:50:18] 2026-01-26 12:50:18,333 [wrapper] cleanup supervisor_pilot 19672 2483
[2026-01-26 13:50:18] 2026-01-26 12:50:18,340 [wrapper] Test setup, not cleaning
[2026-01-26 13:50:18] 2026-01-26 12:50:18,342 [wrapper] apfmon messages muted
[2026-01-26 13:50:18] 2026-01-26 12:50:18,345 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:50:18] 2026-01-26 12:50:18,348 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:50:18]  *** Error codes and diagnostics ***
[2026-01-26 13:50:18]     "exeErrorCode": 0,
[2026-01-26 13:50:18]     "exeErrorDiag": "",
[2026-01-26 13:50:18]     "pilotErrorCode": 0,
[2026-01-26 13:50:18]     "pilotErrorDiag": "",
[2026-01-26 13:50:18]  *** Listing of results directory ***
[2026-01-26 13:50:18] total 419336
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-26 13:50:18] -rwx------. 1 boinc boinc     36322 Jan 25 21:49 runpilot2-wrapper.sh
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc      5111 Jan 25 21:51 queuedata.json
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc       100 Jan 26 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:50:18] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 09:18 run_atlas
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc       105 Jan 26 09:18 job.xml
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc      6392 Jan 26 09:18 init_data.xml
[2026-01-26 13:50:18] -rw-r--r--. 2 boinc boinc 251243505 Jan 26 09:18 EVNT.48298565._000020.pool.root.1
[2026-01-26 13:50:18] -rw-r--r--. 2 boinc boinc     15845 Jan 26 09:18 start_atlas.sh
[2026-01-26 13:50:18] drwxrwx--x. 2 boinc boinc        68 Jan 26 09:18 shared
[2026-01-26 13:50:18] -rw-r--r--. 2 boinc boinc    597775 Jan 26 09:18 input.tar.gz
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc         0 Jan 26 09:18 boinc_lockfile
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc      2614 Jan 26 09:18 pandaJob.out
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc   1004254 Jan 26 09:18 agis_schedconf.cvmfs.json
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc       415 Jan 26 09:18 workernode_map.json
[2026-01-26 13:50:18] drwx------. 5 boinc boinc      4096 Jan 26 09:18 pilot3
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc 168761005 Jan 26 13:48 HITS.48298567._000480.pool.root.1
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc       531 Jan 26 13:49 boinc_task_state.xml
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc        95 Jan 26 13:49 pilot_heartbeat.json
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc      1026 Jan 26 13:49 memory_monitor_summary.json
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc   1516246 Jan 26 13:49 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc    477553 Jan 26 13:49 log.48298567._000480.job.log.tgz.1
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc      6309 Jan 26 13:49 heartbeat.json
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc      8192 Jan 26 13:50 boinc_mmap_file
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc        28 Jan 26 13:50 wrapper_checkpoint.txt
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc      4879 Jan 26 13:50 pilotlog.txt
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc   2254571 Jan 26 13:50 log.48298567._000480.job.log.1
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc       357 Jan 26 13:50 output.list
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc       620 Jan 26 13:50 runtime_log
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc   2754560 Jan 26 13:50 result.tar.gz
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc      8816 Jan 26 13:50 runtime_log.err
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc       656 Jan 26 13:50 Qr9KDmKEM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGn1KDmaiAyKo.diag
[2026-01-26 13:50:18] -rw-r--r--. 1 boinc boinc     20884 Jan 26 13:50 stderr.txt
[2026-01-26 13:50:18] HITS file was successfully produced:
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc 168761005 Jan 26 13:48 shared/HITS.pool.root.1
[2026-01-26 13:50:18]  *** Contents of shared directory: ***
[2026-01-26 13:50:18] total 413456
[2026-01-26 13:50:18] -rw-r--r--. 2 boinc boinc 251243505 Jan 26 09:18 ATLAS.root_0
[2026-01-26 13:50:18] -rw-r--r--. 2 boinc boinc     15845 Jan 26 09:18 start_atlas.sh
[2026-01-26 13:50:18] -rw-r--r--. 2 boinc boinc    597775 Jan 26 09:18 input.tar.gz
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc 168761005 Jan 26 13:48 HITS.pool.root.1
[2026-01-26 13:50:18] -rw-------. 1 boinc boinc   2754560 Jan 26 13:50 result.tar.gz
13:50:19 (30817): run_atlas exited; CPU time 64512.994234
13:50:19 (30817): called boinc_finish(0)

</stderr_txt>
]]>

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