Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:01:27 (31663): wrapper (7.7.26015): starting
20:01:27 (31663): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 20:01:27] Arguments: --nthreads 8
[2026-01-25 20:01:27] Threads: 8
[2026-01-25 20:01:27] Checking for CVMFS
[2026-01-25 20:01:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 20:01:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 20:01:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 20:01:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 20:01:28] 2.11.2.0 2937 39393 87268 155526 2 50 10327975 20275200 1 130560 0 9711877 99.772 3206224 30780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 20:01:28] CVMFS is ok
[2026-01-25 20:01:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 20:01:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 20:01:28] Further information can be found at the LHC@home message board.
[2026-01-25 20:01:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 20:01:28] Checking for apptainer binary...
[2026-01-25 20:01:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 20:01:28] Running /usr/bin/apptainer --version
[2026-01-25 20:01:28] apptainer version 1.3.2-1.el7
[2026-01-25 20:01:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 20:01:30] c-115-5.aglt2.org
[2026-01-25 20:01:30] apptainer works
[2026-01-25 20:01:30] Set ATHENA_PROC_NUMBER=8
[2026-01-25 20:01:30] Set ATHENA_CORE_NUMBER=8
[2026-01-25 20:01:30] Starting ATLAS job with PandaID=6983345447
[2026-01-25 20:01:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 21:52:11]  *** The last 200 lines of the pilot log: ***
[2026-01-25 21:52:11] 2026-01-26 02:51:19,250 | INFO     | extracted standard info from prmon json
[2026-01-25 21:52:11] 2026-01-26 02:51:19,250 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 21:52:11] 2026-01-26 02:51:19,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 21:52:11] 2026-01-26 02:51:19,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 21:52:11] 2026-01-26 02:51:19,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 21:52:11] 2026-01-26 02:51:19,253 | INFO     | fitting pss+swap vs Time
[2026-01-25 21:52:11] 2026-01-26 02:51:19,253 | INFO     | sum of square deviations: 390582207.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,253 | INFO     | sum of deviations: 4253775219.999999
[2026-01-25 21:52:11] 2026-01-26 02:51:19,253 | INFO     | mean x: 1769392603.5
[2026-01-25 21:52:11] 2026-01-26 02:51:19,254 | INFO     | mean y: 2472491.7592592593
[2026-01-25 21:52:11] 2026-01-26 02:51:19,254 | INFO     | intersect: -19267730493.2415
[2026-01-25 21:52:11] 2026-01-26 02:51:19,254 | INFO     | chi2: 2.1391931141965963
[2026-01-25 21:52:11] 2026-01-26 02:51:19,254 | INFO     | sum of square deviations: 338804492.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,255 | INFO     | sum of deviations: 10941303979.000008
[2026-01-25 21:52:11] 2026-01-26 02:51:19,255 | INFO     | mean x: 1769392451.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,255 | INFO     | mean y: 2491399.7572815535
[2026-01-25 21:52:11] 2026-01-26 02:51:19,255 | INFO     | intersect: -57138016243.03654
[2026-01-25 21:52:11] 2026-01-26 02:51:19,255 | INFO     | chi2: 1.3754076013625627
[2026-01-25 21:52:11] 2026-01-26 02:51:19,255 | INFO     | current chi2=1.3754076013625627 (change=35.70437412897544 %)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,256 | INFO     | sum of square deviations: 291817564.5
[2026-01-25 21:52:11] 2026-01-26 02:51:19,256 | INFO     | sum of deviations: 10350846701.500002
[2026-01-25 21:52:11] 2026-01-26 02:51:19,256 | INFO     | mean x: 1769392298.5
[2026-01-25 21:52:11] 2026-01-26 02:51:19,256 | INFO     | mean y: 2489481.887755102
[2026-01-25 21:52:11] 2026-01-26 02:51:19,256 | INFO     | intersect: -62758326399.667
[2026-01-25 21:52:11] 2026-01-26 02:51:19,257 | INFO     | chi2: 1.378546426885647
[2026-01-25 21:52:11] 2026-01-26 02:51:19,257 | INFO     | current chi2=1.378546426885647 (change=-0.22821056972310672 %)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,257 | INFO     | right removable region: 97
[2026-01-25 21:52:11] 2026-01-26 02:51:19,257 | INFO     | sum of square deviations: 338804492.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,257 | INFO     | sum of deviations: -9817246364.999998
[2026-01-25 21:52:11] 2026-01-26 02:51:19,258 | INFO     | mean x: 1769392756.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,258 | INFO     | mean y: 2512932.650485437
[2026-01-25 21:52:11] 2026-01-26 02:51:19,258 | INFO     | intersect: 51272685000.19889
[2026-01-25 21:52:11] 2026-01-26 02:51:19,258 | INFO     | chi2: 0.8632582564484463
[2026-01-25 21:52:11] 2026-01-26 02:51:19,258 | INFO     | current chi2=0.8632582564484463 (change=59.645613539072414 %)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,258 | INFO     | sum of square deviations: 291817564.5
[2026-01-25 21:52:11] 2026-01-26 02:51:19,259 | INFO     | sum of deviations: -8165963219.499999
[2026-01-25 21:52:11] 2026-01-26 02:51:19,259 | INFO     | mean x: 1769392908.5
[2026-01-25 21:52:11] 2026-01-26 02:51:19,259 | INFO     | mean y: 2507378.4591836734
[2026-01-25 21:52:11] 2026-01-26 02:51:19,259 | INFO     | intersect: 49515625056.6623
[2026-01-25 21:52:11] 2026-01-26 02:51:19,259 | INFO     | chi2: 0.8442946013732068
[2026-01-25 21:52:11] 2026-01-26 02:51:19,259 | INFO     | current chi2=0.8442946013732068 (change=2.1967533972114484 %)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,260 | INFO     | left removable region: 20
[2026-01-25 21:52:11] 2026-01-26 02:51:19,260 | INFO     | sum of square deviations: 141539398.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,260 | INFO     | sum of deviations: 893953292.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,260 | INFO     | mean x: 1769392878.0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,260 | INFO     | mean y: 2519423.6103896103
[2026-01-25 21:52:11] 2026-01-26 02:51:19,260 | INFO     | intersect: -11172846661.594059
[2026-01-25 21:52:11] 2026-01-26 02:51:19,261 | INFO     | chi2: 0.00014551008741320505
[2026-01-25 21:52:11] 2026-01-26 02:51:19,261 | INFO     | current memory leak: 6.32 B/s (using 77 data points, chi2=0.00)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,261 | INFO     | could have reported an average CPU frequency of 1729 MHz (7 samples)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,261 | INFO     | ..............................
[2026-01-25 21:52:11] 2026-01-26 02:51:19,261 | INFO     | . Timing measurements:
[2026-01-25 21:52:11] 2026-01-26 02:51:19,261 | INFO     | . get job = 0 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | . initial setup = 8 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | . payload setup = 8 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | . stage-in = 0 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | . payload execution = 6539 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | . stage-out = 0 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | . log creation = 0 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,262 | INFO     | ..............................
[2026-01-25 21:52:11] 2026-01-26 02:51:19,337 | INFO     | 
[2026-01-25 21:52:11] 2026-01-26 02:51:19,338 | INFO     | job summary report
[2026-01-25 21:52:11] 2026-01-26 02:51:19,338 | INFO     | --------------------------------------------------
[2026-01-25 21:52:11] 2026-01-26 02:51:19,338 | INFO     | PanDA job id: 6983345447
[2026-01-25 21:52:11] 2026-01-26 02:51:19,338 | INFO     | task id: 48317872
[2026-01-25 21:52:11] 2026-01-26 02:51:19,338 | INFO     | errors: (none)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 21:52:11] 2026-01-26 02:51:19,339 | INFO     | pilot state: finished 
[2026-01-25 21:52:11] 2026-01-26 02:51:19,339 | INFO     | transexitcode: 0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,339 | INFO     | exeerrorcode: 0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,339 | INFO     | exeerrordiag: 
[2026-01-25 21:52:11] 2026-01-26 02:51:19,339 | INFO     | exitcode: 0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,340 | INFO     | exitmsg: OK
[2026-01-25 21:52:11] 2026-01-26 02:51:19,340 | INFO     | cpuconsumptiontime: 48401 s
[2026-01-25 21:52:11] 2026-01-26 02:51:19,340 | INFO     | nevents: 400
[2026-01-25 21:52:11] 2026-01-26 02:51:19,340 | INFO     | neventsw: 0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,340 | INFO     | pid: 7792
[2026-01-25 21:52:11] 2026-01-26 02:51:19,340 | INFO     | pgrp: 7792
[2026-01-25 21:52:11] 2026-01-26 02:51:19,341 | INFO     | corecount: 8
[2026-01-25 21:52:11] 2026-01-26 02:51:19,341 | INFO     | event service: False
[2026-01-25 21:52:11] 2026-01-26 02:51:19,341 | INFO     | sizes: {0: 2283797, 1: 2284258, 11: 2284258, 6551: 2311302, 6552: 2320355, 6554: 2320677}
[2026-01-25 21:52:11] 2026-01-26 02:51:19,341 | INFO     | --------------------------------------------------
[2026-01-25 21:52:11] 2026-01-26 02:51:19,341 | INFO     | 
[2026-01-25 21:52:11] 2026-01-26 02:51:19,341 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 21:52:11] 2026-01-26 02:51:19,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,368 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,368 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,368 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,369 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,369 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,371 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,371 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 21:52:11] 2026-01-26 02:51:19,371 | INFO     | job 6983345447 has completed (purged errors)
[2026-01-25 21:52:11] 2026-01-26 02:51:19,372 | INFO     | overall cleanup function is called
[2026-01-25 21:52:11] 2026-01-26 02:51:20,330 | WARNING  | process 7792 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 21:52:11] 2026-01-26 02:51:20,375 | INFO     | --- collectZombieJob: --- 10, [7792]
[2026-01-25 21:52:11] 2026-01-26 02:51:20,376 | INFO     | zombie collector waiting for pid 7792
[2026-01-25 21:52:11] 2026-01-26 02:51:20,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 21:52:11] 2026-01-26 02:51:20,376 | INFO     | collected zombie processes
[2026-01-25 21:52:11] 2026-01-26 02:51:20,376 | INFO     | will attempt to kill all subprocesses of pid=7792
[2026-01-25 21:52:11] 2026-01-26 02:51:20,442 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 21:52:11] 2026-01-26 02:51:20,576 | INFO     | process IDs to be killed: [7792] (in reverse order)
[2026-01-25 21:52:11] 2026-01-26 02:51:20,604 | INFO     | number of running child processes to parent process 7792: 1
[2026-01-25 21:52:11] 2026-01-26 02:51:20,604 | INFO     | maximum number of monitored processes: 6
[2026-01-25 21:52:11] 2026-01-26 02:51:20,604 | INFO     | aborting job monitoring since job object (job id=6983345447) has expired
[2026-01-25 21:52:11] 2026-01-26 02:51:20,631 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 21:52:11] 2026-01-26 02:51:20,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 21:52:11] 2026-01-26 02:51:20,635 | INFO     | did not find any defunct processes belonging to 7792
[2026-01-25 21:52:11] 2026-01-26 02:51:20,638 | INFO     | did not find any defunct processes belonging to 7792
[2026-01-25 21:52:11] 2026-01-26 02:51:20,638 | INFO     | ready for new job
[2026-01-25 21:52:11] 2026-01-26 02:51:20,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 21:52:11] 2026-01-26 02:51:20,639 | INFO     | **************************************
[2026-01-25 21:52:11] 2026-01-26 02:51:20,639 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 21:52:11] 2026-01-26 02:51:20,640 | INFO     | **************************************
[2026-01-25 21:52:11] 2026-01-26 02:51:20,640 | INFO     | 
[2026-01-25 21:52:11] 2026-01-26 02:51:20,640 | INFO     | architecture information:
[2026-01-25 21:52:11] 2026-01-26 02:51:20,641 | INFO     | executing command: cat /etc/os-release
[2026-01-25 21:52:11] 2026-01-26 02:51:20,659 | INFO     | cat /etc/os-release:
[2026-01-25 21:52:11] NAME="CentOS Linux"
[2026-01-25 21:52:11] VERSION="7 (Core)"
[2026-01-25 21:52:11] ID="centos"
[2026-01-25 21:52:11] ID_LIKE="rhel fedora"
[2026-01-25 21:52:11] VERSION_ID="7"
[2026-01-25 21:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 21:52:11] ANSI_COLOR="0;31"
[2026-01-25 21:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 21:52:11] HOME_URL="https://www.centos.org/"
[2026-01-25 21:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 21:52:11] 
[2026-01-25 21:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 21:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 21:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 21:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 21:52:11] 
[2026-01-25 21:52:11] 2026-01-26 02:51:20,660 | INFO     | **************************************
[2026-01-25 21:52:11] 2026-01-26 02:51:21,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 21:52:11] 2026-01-26 02:51:21,184 | INFO     | sufficient remaining disk space (18029215744 B)
[2026-01-25 21:52:11] 2026-01-26 02:51:21,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 21:52:11] 2026-01-26 02:51:21,185 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 21:52:11] 2026-01-26 02:51:21,185 | INFO     | update_server=False
[2026-01-25 21:52:11] 2026-01-26 02:51:21,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 21:52:11] 2026-01-26 02:51:21,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 21:52:11] 2026-01-26 02:51:21,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 21:52:11] 2026-01-26 02:51:21,186 | INFO     | will abort loop
[2026-01-25 21:52:11] 2026-01-26 02:51:21,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 21:52:11] 2026-01-26 02:51:21,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 21:52:11] 2026-01-26 02:51:21,345 | INFO     | all data control threads have been joined
[2026-01-25 21:52:11] 2026-01-26 02:51:22,191 | INFO     | [job] retrieve thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,191 | INFO     | [job] queue monitor thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,192 | INFO     | [job] job monitor thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,235 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,266 | INFO     | [data] copytool_in thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,351 | INFO     | [data] control thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,454 | INFO     | all job control threads have been joined
[2026-01-25 21:52:11] 2026-01-26 02:51:22,483 | INFO     | [payload] failed_post thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:22,564 | INFO     | all payload control threads have been joined
[2026-01-25 21:52:11] 2026-01-26 02:51:22,571 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:23,045 | INFO     | [payload] validate_post thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:23,162 | INFO     | [job] validate thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:23,192 | INFO     | [data] copytool_out thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:23,459 | INFO     | [job] control thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:23,567 | INFO     | [payload] control thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:23,675 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:25,192 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:32,187 | INFO     | job.realtimelogging is not enabled
[2026-01-25 21:52:11] 2026-01-26 02:51:33,188 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 21:52:11] 2026-01-26 02:51:52,160 | INFO     | PID=3351 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 21:52:11] 2026-01-26 02:51:52,160 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 21:52:11] 2026-01-26 02:51:52,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 21:52:11] 2026-01-26 02:51:52,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 21:52:11] 2026-01-26 02:52:04,722 | INFO     | [monitor] cgroup control has ended
[2026-01-25 21:52:11] 2026-01-26 02:52:06,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690502207296)>', '<ExcThread(monitor, started 139689172395776)>']
[2026-01-25 21:52:11] 2026-01-26 02:52:07,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 21:52:11] 2026-01-26 02:52:07,228 | INFO     | [monitor] control thread has ended
[2026-01-25 21:52:11] 2026-01-26 02:52:11,444 | INFO     | all workflow threads have been joined
[2026-01-25 21:52:11] 2026-01-26 02:52:11,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 21:52:11] 2026-01-26 02:52:11,445 | INFO     | traces error code: 0
[2026-01-25 21:52:11] 2026-01-26 02:52:11,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 21:52:11] 2026-01-26 02:52:11,559 [wrapper] ==== pilot stdout END ====
[2026-01-25 21:52:11] 2026-01-26 02:52:11,563 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 21:52:11] 2026-01-26 02:52:11,567 [wrapper] pilotpid: 3351
[2026-01-25 21:52:11] 2026-01-26 02:52:11,571 [wrapper] Pilot exit status: 0
[2026-01-25 21:52:11] 2026-01-26 02:52:11,590 [wrapper] pandaids: 6983345447
[2026-01-25 21:52:11] 2026-01-26 02:52:11,640 [wrapper] cleanup supervisor_pilot 14499 3352
[2026-01-25 21:52:11] 2026-01-26 02:52:11,645 [wrapper] Test setup, not cleaning
[2026-01-25 21:52:11] 2026-01-26 02:52:11,650 [wrapper] apfmon messages muted
[2026-01-25 21:52:11] 2026-01-26 02:52:11,655 [wrapper] ==== wrapper stdout END ====
[2026-01-25 21:52:11] 2026-01-26 02:52:11,659 [wrapper] ==== wrapper stderr END ====
[2026-01-25 21:52:11]  *** Error codes and diagnostics ***
[2026-01-25 21:52:11]     "exeErrorCode": 0,
[2026-01-25 21:52:11]     "exeErrorDiag": "",
[2026-01-25 21:52:11]     "pilotErrorCode": 0,
[2026-01-25 21:52:11]     "pilotErrorDiag": "",
[2026-01-25 21:52:11]  *** Listing of results directory ***
[2026-01-25 21:52:11] total 665332
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 15:48 queuedata.json
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-25 21:52:11] -rwx------ 1 boincer umatlas     36322 Jan 25 15:49 runpilot2-wrapper.sh
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas       100 Jan 25 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 21:52:11] -rwxr-xr-x 1 boincer umatlas      7986 Jan 25 20:01 run_atlas
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas       105 Jan 25 20:01 job.xml
[2026-01-25 21:52:11] -rw-r--r-- 2 boincer umatlas 492810001 Jan 25 20:01 EVNT.48317869._000030.pool.root.1
[2026-01-25 21:52:11] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 20:01 start_atlas.sh
[2026-01-25 21:52:11] drwxrwx--x 2 boincer umatlas      4096 Jan 25 20:01 shared
[2026-01-25 21:52:11] -rw-r--r-- 2 boincer umatlas    597749 Jan 25 20:01 input.tar.gz
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas         0 Jan 25 20:01 boinc_lockfile
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas      2513 Jan 25 20:01 pandaJob.out
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas        57 Jan 25 20:01 setup.sh.local
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas   1004246 Jan 25 20:01 agis_schedconf.cvmfs.json
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas   1516246 Jan 25 20:01 agis_ddmendpoints.agis.ALL.json
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas       432 Jan 25 20:01 workernode_map.json
[2026-01-25 21:52:11] drwx------ 5 boincer umatlas      4096 Jan 25 20:01 pilot3
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas      5908 Jan 25 21:49 init_data.xml
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas 181980043 Jan 25 21:50 HITS.48317872._001470.pool.root.1
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas        95 Jan 25 21:51 pilot_heartbeat.json
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas      1046 Jan 25 21:51 memory_monitor_summary.json
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas    354208 Jan 25 21:51 log.48317872._001470.job.log.tgz.1
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas      6392 Jan 25 21:51 heartbeat.json
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas       530 Jan 25 21:51 boinc_task_state.xml
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas      8192 Jan 25 21:52 boinc_mmap_file
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas        27 Jan 25 21:52 wrapper_checkpoint.txt
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas      4815 Jan 25 21:52 pilotlog.txt
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas    933266 Jan 25 21:52 log.48317872._001470.job.log.1
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas       357 Jan 25 21:52 output.list
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas       620 Jan 25 21:52 runtime_log
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas   1300480 Jan 25 21:52 result.tar.gz
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas       657 Jan 25 21:52 tRzNDmqDM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFm1KDmslBO3n.diag
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas      9336 Jan 25 21:52 runtime_log.err
[2026-01-25 21:52:11] -rw-r--r-- 1 boincer umatlas     21003 Jan 25 21:52 stderr.txt
[2026-01-25 21:52:11] HITS file was successfully produced:
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas 181980043 Jan 25 21:50 shared/HITS.pool.root.1
[2026-01-25 21:52:11]  *** Contents of shared directory: ***
[2026-01-25 21:52:11] total 660852
[2026-01-25 21:52:11] -rw-r--r-- 2 boincer umatlas 492810001 Jan 25 20:01 ATLAS.root_0
[2026-01-25 21:52:11] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 20:01 start_atlas.sh
[2026-01-25 21:52:11] -rw-r--r-- 2 boincer umatlas    597749 Jan 25 20:01 input.tar.gz
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas 181980043 Jan 25 21:50 HITS.pool.root.1
[2026-01-25 21:52:11] -rw------- 1 boincer umatlas   1300480 Jan 25 21:52 result.tar.gz
21:52:13 (31663): run_atlas exited; CPU time 48415.700948
21:52:13 (31663): called boinc_finish(0)

</stderr_txt>
]]>

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