Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:34 (22297): wrapper (7.7.26015): starting
09:11:34 (22297): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 09:11:34] Arguments: --nthreads 8
[2026-01-26 09:11:34] Threads: 8
[2026-01-26 09:11:34] Checking for CVMFS
[2026-01-26 09:11:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:11:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:11:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:11:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:11:38] 2.11.2.0 16892 59628 133288 155539 1 57 17302232 25165824 4016 130560 0 15192741 99.729 16596188 3533 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 09:11:38] CVMFS is ok
[2026-01-26 09:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:11:38] Checking for apptainer binary...
[2026-01-26 09:11:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:11:38] Running /usr/bin/apptainer --version
[2026-01-26 09:11:38] apptainer version 1.3.2-1.el7
[2026-01-26 09:11:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:11:52] cg-vwn499.simple-grid.lan
[2026-01-26 09:11:52] apptainer works
[2026-01-26 09:11:52] Set ATHENA_PROC_NUMBER=8
[2026-01-26 09:11:52] Set ATHENA_CORE_NUMBER=8
[2026-01-26 09:11:52] Starting ATLAS job with PandaID=6983345022
[2026-01-26 09:11:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:05:28]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:05:28] 2026-01-26 12:04:15,644 | INFO     | time since job start (13640s) is within the limit (349056.0s)
[2026-01-26 13:05:28] 2026-01-26 12:04:15,998 | INFO     | job 6983345022 has state=finished
[2026-01-26 13:05:28] 2026-01-26 12:04:15,999 | INFO     | preparing for final server update for job 6983345022 in state='finished'
[2026-01-26 13:05:28] 2026-01-26 12:04:15,999 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-6983345022/jobReport.json
[2026-01-26 13:05:28] 2026-01-26 12:04:16,001 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-01-26 13:05:28] 2026-01-26 12:04:16,002 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,002 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,002 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:05:28] 2026-01-26 12:04:16,002 | INFO     | job 6983345022 has finished - writing final server update
[2026-01-26 13:05:28] 2026-01-26 12:04:16,003 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,005 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6983345022/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,005 | INFO     | extracted standard info from prmon json
[2026-01-26 13:05:28] 2026-01-26 12:04:16,005 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:05:28] 2026-01-26 12:04:16,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:05:28] 2026-01-26 12:04:16,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:05:28] 2026-01-26 12:04:16,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:05:28] 2026-01-26 12:04:16,010 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:05:28] 2026-01-26 12:04:16,011 | INFO     | sum of square deviations: 3301699115.0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,012 | INFO     | sum of deviations: 4605756230.500008
[2026-01-26 13:05:28] 2026-01-26 12:04:16,013 | INFO     | mean x: 1769422339.5
[2026-01-26 13:05:28] 2026-01-26 12:04:16,013 | INFO     | mean y: 2493677.0863636364
[2026-01-26 13:05:28] 2026-01-26 12:04:16,013 | INFO     | intersect: -2465789373.7566943
[2026-01-26 13:05:28] 2026-01-26 12:04:16,013 | INFO     | chi2: 4.7619798965084925
[2026-01-26 13:05:28] 2026-01-26 12:04:16,014 | INFO     | sum of square deviations: 3081657780.0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,016 | INFO     | sum of deviations: 19340960730.0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,016 | INFO     | mean x: 1769422187.0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,016 | INFO     | mean y: 2503703.8604651163
[2026-01-26 13:05:28] 2026-01-26 12:04:16,016 | INFO     | intersect: -11102663539.452877
[2026-01-26 13:05:28] 2026-01-26 12:04:16,016 | INFO     | chi2: 4.028699597028118
[2026-01-26 13:05:28] 2026-01-26 12:04:16,017 | INFO     | current chi2=4.028699597028118 (change=15.398643325185377 %)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,017 | INFO     | right removable region: 214
[2026-01-26 13:05:28] 2026-01-26 12:04:16,020 | INFO     | sum of square deviations: 3081657780.0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,022 | INFO     | sum of deviations: -62385473846.00001
[2026-01-26 13:05:28] 2026-01-26 12:04:16,022 | INFO     | mean x: 1769422492.0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,022 | INFO     | mean y: 2539983.074418605
[2026-01-26 13:05:28] 2026-01-26 12:04:16,022 | INFO     | intersect: 35822954992.68336
[2026-01-26 13:05:28] 2026-01-26 12:04:16,023 | INFO     | chi2: 1.1308773392826337
[2026-01-26 13:05:28] 2026-01-26 12:04:16,023 | INFO     | current chi2=1.1308773392826337 (change=76.25195057812405 %)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,023 | INFO     | sum of square deviations: 2871616632.5
[2026-01-26 13:05:28] 2026-01-26 12:04:16,025 | INFO     | sum of deviations: -70933446759.5
[2026-01-26 13:05:28] 2026-01-26 12:04:16,025 | INFO     | mean x: 1769422644.5
[2026-01-26 13:05:28] 2026-01-26 12:04:16,025 | INFO     | mean y: 2546140.4142857143
[2026-01-26 13:05:28] 2026-01-26 12:04:16,025 | INFO     | intersect: 43710068073.59993
[2026-01-26 13:05:28] 2026-01-26 12:04:16,025 | INFO     | chi2: 1.0024277103888373
[2026-01-26 13:05:28] 2026-01-26 12:04:16,026 | INFO     | current chi2=1.0024277103888373 (change=11.358405057022168 %)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,026 | INFO     | left removable region: 20
[2026-01-26 13:05:28] 2026-01-26 12:04:16,026 | INFO     | sum of square deviations: 2263977332.5
[2026-01-26 13:05:28] 2026-01-26 12:04:16,028 | INFO     | sum of deviations: -46030385036.00001
[2026-01-26 13:05:28] 2026-01-26 12:04:16,028 | INFO     | mean x: 1769422766.5
[2026-01-26 13:05:28] 2026-01-26 12:04:16,028 | INFO     | mean y: 2550799.536082474
[2026-01-26 13:05:28] 2026-01-26 12:04:16,028 | INFO     | intersect: 35977827611.83576
[2026-01-26 13:05:28] 2026-01-26 12:04:16,028 | INFO     | chi2: 0.19593252071289285
[2026-01-26 13:05:28] 2026-01-26 12:04:16,029 | INFO     | current memory leak: -20.33 B/s (using 194 data points, chi2=0.20)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,029 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,029 | INFO     | ..............................
[2026-01-26 13:05:28] 2026-01-26 12:04:16,029 | INFO     | . Timing measurements:
[2026-01-26 13:05:28] 2026-01-26 12:04:16,029 | INFO     | . get job = 0 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | . initial setup = 105 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | . payload setup = 118 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | . stage-in = 0 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | . payload execution = 13507 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | . stage-out = 3 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | . log creation = 1 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,030 | INFO     | ..............................
[2026-01-26 13:05:28] 2026-01-26 12:04:16,156 | INFO     | 
[2026-01-26 13:05:28] 2026-01-26 12:04:16,156 | INFO     | job summary report
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | --------------------------------------------------
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | PanDA job id: 6983345022
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | task id: 48317872
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | errors: (none)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | pilot state: finished 
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | transexitcode: 0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,157 | INFO     | exeerrorcode: 0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,158 | INFO     | exeerrordiag: 
[2026-01-26 13:05:28] 2026-01-26 12:04:16,158 | INFO     | exitcode: 0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,158 | INFO     | exitmsg: OK
[2026-01-26 13:05:28] 2026-01-26 12:04:16,158 | INFO     | cpuconsumptiontime: 51972 s
[2026-01-26 13:05:28] 2026-01-26 12:04:16,158 | INFO     | nevents: 400
[2026-01-26 13:05:28] 2026-01-26 12:04:16,164 | INFO     | neventsw: 0
[2026-01-26 13:05:28] 2026-01-26 12:04:16,164 | INFO     | pid: 30935
[2026-01-26 13:05:28] 2026-01-26 12:04:16,164 | INFO     | pgrp: 30935
[2026-01-26 13:05:28] 2026-01-26 12:04:16,165 | INFO     | corecount: 8
[2026-01-26 13:05:28] 2026-01-26 12:04:16,165 | INFO     | event service: False
[2026-01-26 13:05:28] 2026-01-26 12:04:16,165 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2284288, 13629: 2314476, 13633: 2323474, 13636: 2323530, 13639: 2323852}
[2026-01-26 13:05:28] 2026-01-26 12:04:16,165 | INFO     | --------------------------------------------------
[2026-01-26 13:05:28] 2026-01-26 12:04:16,165 | INFO     | 
[2026-01-26 13:05:28] 2026-01-26 12:04:16,165 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-26 13:05:28] 2026-01-26 12:04:16,668 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,668 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,668 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,668 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | job 6983345022 has completed (purged errors)
[2026-01-26 13:05:28] 2026-01-26 12:04:16,670 | INFO     | overall cleanup function is called
[2026-01-26 13:05:28] 2026-01-26 12:04:17,679 | INFO     | --- collectZombieJob: --- 10, [30935]
[2026-01-26 13:05:28] 2026-01-26 12:04:17,679 | INFO     | zombie collector waiting for pid 30935
[2026-01-26 13:05:28] 2026-01-26 12:04:17,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:05:28] 2026-01-26 12:04:17,680 | INFO     | collected zombie processes
[2026-01-26 13:05:28] 2026-01-26 12:04:17,680 | INFO     | will attempt to kill all subprocesses of pid=30935
[2026-01-26 13:05:28] 2026-01-26 12:04:17,778 | INFO     | process IDs to be killed: [30935] (in reverse order)
[2026-01-26 13:05:28] 2026-01-26 12:04:18,479 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:05:28] 2026-01-26 12:04:18,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:05:28] 2026-01-26 12:04:18,483 | INFO     | did not find any defunct processes belonging to 30935
[2026-01-26 13:05:28] 2026-01-26 12:04:18,485 | INFO     | did not find any defunct processes belonging to 30935
[2026-01-26 13:05:28] 2026-01-26 12:04:18,486 | INFO     | ready for new job
[2026-01-26 13:05:28] 2026-01-26 12:04:18,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:05:28] 2026-01-26 12:04:18,488 | INFO     | **************************************
[2026-01-26 13:05:28] 2026-01-26 12:04:18,488 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:05:28] 2026-01-26 12:04:18,488 | INFO     | **************************************
[2026-01-26 13:05:28] 2026-01-26 12:04:18,488 | INFO     | 
[2026-01-26 13:05:28] 2026-01-26 12:04:18,489 | INFO     | pilot is running in a VM
[2026-01-26 13:05:28] 2026-01-26 12:04:18,489 | INFO     | architecture information:
[2026-01-26 13:05:28] 2026-01-26 12:04:18,489 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:05:28] 2026-01-26 12:04:18,689 | INFO     | cat /etc/os-release:
[2026-01-26 13:05:28] NAME="CentOS Linux"
[2026-01-26 13:05:28] VERSION="7 (Core)"
[2026-01-26 13:05:28] ID="centos"
[2026-01-26 13:05:28] ID_LIKE="rhel fedora"
[2026-01-26 13:05:28] VERSION_ID="7"
[2026-01-26 13:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:05:28] ANSI_COLOR="0;31"
[2026-01-26 13:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:05:28] HOME_URL="https://www.centos.org/"
[2026-01-26 13:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:05:28] 
[2026-01-26 13:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:05:28] 
[2026-01-26 13:05:28] 2026-01-26 12:04:18,689 | INFO     | **************************************
[2026-01-26 13:05:28] 2026-01-26 12:04:19,192 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-26 13:05:28] 2026-01-26 12:04:19,462 | INFO     | sufficient remaining disk space (496983080960 B)
[2026-01-26 13:05:28] 2026-01-26 12:04:19,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:05:28] 2026-01-26 12:04:19,462 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:05:28] 2026-01-26 12:04:19,463 | INFO     | update_server=False
[2026-01-26 13:05:28] 2026-01-26 12:04:19,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:05:28] 2026-01-26 12:04:19,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:05:28] 2026-01-26 12:04:19,506 | INFO     | all job control threads have been joined
[2026-01-26 13:05:28] 2026-01-26 12:04:19,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:05:28] 2026-01-26 12:04:19,979 | INFO     | all payload control threads have been joined
[2026-01-26 13:05:28] 2026-01-26 12:04:20,386 | INFO     | all data control threads have been joined
[2026-01-26 13:05:28] 2026-01-26 12:04:20,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:05:28] 2026-01-26 12:04:20,466 | INFO     | aborting loop
[2026-01-26 13:05:28] 2026-01-26 12:04:20,468 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:20,489 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:20,512 | INFO     | [job] control thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:20,833 | INFO     | [job] validate thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:20,931 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:20,973 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:20,985 | INFO     | [payload] control thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,073 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:05:28] 2026-01-26 12:04:21,392 | INFO     | [data] control thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,472 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,476 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,484 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,728 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:21,903 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:22,178 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:23,710 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:05:28] 2026-01-26 12:04:48,791 | INFO     | PID=26415 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 13:05:28] 2026-01-26 12:04:48,791 | INFO     | .. there are 9 such processes running
[2026-01-26 13:05:28] 2026-01-26 12:04:48,792 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:05:28] 2026-01-26 12:04:48,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:05:28] 2026-01-26 12:04:48,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:05:28] 2026-01-26 12:05:18,682 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:05:28] 2026-01-26 12:05:19,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075665667904)>', '<ExcThread(monitor, started 140075224512256)>']
[2026-01-26 13:05:28] 2026-01-26 12:05:19,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:05:28] 2026-01-26 12:05:19,979 | INFO     | [monitor] control thread has ended
[2026-01-26 13:05:28] 2026-01-26 12:05:24,465 | INFO     | all workflow threads have been joined
[2026-01-26 13:05:28] 2026-01-26 12:05:24,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:05:28] 2026-01-26 12:05:24,466 | INFO     | traces error code: 0
[2026-01-26 13:05:28] 2026-01-26 12:05:24,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:05:28] 2026-01-26 12:05:24,838 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:05:28] 2026-01-26 12:05:24,920 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:05:28] 2026-01-26 12:05:25,004 [wrapper] pilotpid: 26415
[2026-01-26 13:05:28] 2026-01-26 12:05:25,117 [wrapper] Pilot exit status: 0
[2026-01-26 13:05:28] 2026-01-26 12:05:25,616 [wrapper] pandaids: 6983345022
[2026-01-26 13:05:28] 2026-01-26 12:05:26,517 [wrapper] cleanup supervisor_pilot  6481 26416
[2026-01-26 13:05:28] 2026-01-26 12:05:26,563 [wrapper] Test setup, not cleaning
[2026-01-26 13:05:28] 2026-01-26 12:05:26,596 [wrapper] apfmon messages muted
[2026-01-26 13:05:28] 2026-01-26 12:05:26,643 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:05:28] 2026-01-26 12:05:26,698 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:05:28]  *** Error codes and diagnostics ***
[2026-01-26 13:05:29]     "exeErrorCode": 0,
[2026-01-26 13:05:29]     "exeErrorDiag": "",
[2026-01-26 13:05:29]     "pilotErrorCode": 0,
[2026-01-26 13:05:29]     "pilotErrorDiag": "",
[2026-01-26 13:05:29]  *** Listing of results directory ***
[2026-01-26 13:05:29] total 669052
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc      5111 Jan 25 21:48 queuedata.json
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-26 13:05:29] -rwx------. 1 boinc boinc     36322 Jan 25 21:48 runpilot2-wrapper.sh
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc       100 Jan 26 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:05:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 09:11 run_atlas
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc       105 Jan 26 09:11 job.xml
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc      6391 Jan 26 09:11 init_data.xml
[2026-01-26 13:05:29] -rw-r--r--. 2 boinc boinc 490068203 Jan 26 09:11 EVNT.48317869._000025.pool.root.1
[2026-01-26 13:05:29] -rw-r--r--. 2 boinc boinc     15845 Jan 26 09:11 start_atlas.sh
[2026-01-26 13:05:29] drwxrwx--x. 2 boinc boinc        68 Jan 26 09:11 shared
[2026-01-26 13:05:29] -rw-r--r--. 2 boinc boinc    597752 Jan 26 09:11 input.tar.gz
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc         0 Jan 26 09:11 boinc_lockfile
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc      2514 Jan 26 09:11 pandaJob.out
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc       415 Jan 26 09:16 workernode_map.json
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc   1004254 Jan 26 09:16 agis_schedconf.cvmfs.json
[2026-01-26 13:05:29] drwx------. 5 boinc boinc      4096 Jan 26 09:16 pilot3
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc 186359621 Jan 26 13:02 HITS.48317872._001241.pool.root.1
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc       532 Jan 26 13:03 boinc_task_state.xml
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc      1015 Jan 26 13:04 memory_monitor_summary.json
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc   1516246 Jan 26 13:04 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc    477792 Jan 26 13:04 log.48317872._001241.job.log.tgz.1
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc      6327 Jan 26 13:04 heartbeat.json
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc        95 Jan 26 13:04 pilot_heartbeat.json
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc        28 Jan 26 13:04 wrapper_checkpoint.txt
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc      8192 Jan 26 13:04 boinc_mmap_file
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc      4880 Jan 26 13:05 pilotlog.txt
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc   1904424 Jan 26 13:05 log.48317872._001241.job.log.1
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc       357 Jan 26 13:05 output.list
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc       620 Jan 26 13:05 runtime_log
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc   2396160 Jan 26 13:05 result.tar.gz
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc      8816 Jan 26 13:05 runtime_log.err
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc       656 Jan 26 13:05 5m6MDmgDM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5k1KDmXEVhim.diag
[2026-01-26 13:05:29] -rw-r--r--. 1 boinc boinc     20909 Jan 26 13:05 stderr.txt
[2026-01-26 13:05:29] HITS file was successfully produced:
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc 186359621 Jan 26 13:02 shared/HITS.pool.root.1
[2026-01-26 13:05:29]  *** Contents of shared directory: ***
[2026-01-26 13:05:29] total 663516
[2026-01-26 13:05:29] -rw-r--r--. 2 boinc boinc 490068203 Jan 26 09:11 ATLAS.root_0
[2026-01-26 13:05:29] -rw-r--r--. 2 boinc boinc     15845 Jan 26 09:11 start_atlas.sh
[2026-01-26 13:05:29] -rw-r--r--. 2 boinc boinc    597752 Jan 26 09:11 input.tar.gz
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc 186359621 Jan 26 13:02 HITS.pool.root.1
[2026-01-26 13:05:29] -rw-------. 1 boinc boinc   2396160 Jan 26 13:05 result.tar.gz
13:05:30 (22297): run_atlas exited; CPU time 52165.742361
13:05:30 (22297): called boinc_finish(0)

</stderr_txt>
]]>

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