Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:47:43 (5840): wrapper (7.7.26015): starting
19:47:43 (5840): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 19:47:43] Arguments: --nthreads 8
[2026-01-25 19:47:43] Threads: 8
[2026-01-25 19:47:43] Checking for CVMFS
[2026-01-25 19:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 19:47:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 19:47:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 19:47:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 19:47:44] 2.11.2.0 2698 160442 89292 155526 0 50 11549788 20275201 1 130560 0 41765558 99.874 8700216 29242 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 19:47:44] CVMFS is ok
[2026-01-25 19:47:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 19:47:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 19:47:44] Further information can be found at the LHC@home message board.
[2026-01-25 19:47:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 19:47:44] Checking for apptainer binary...
[2026-01-25 19:47:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 19:47:44] Running /usr/bin/apptainer --version
[2026-01-25 19:47:44] apptainer version 1.3.2-1.el7
[2026-01-25 19:47:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 19:47:46] c-204-2.aglt2.org
[2026-01-25 19:47:46] apptainer works
[2026-01-25 19:47:46] Set ATHENA_PROC_NUMBER=8
[2026-01-25 19:47:46] Set ATHENA_CORE_NUMBER=8
[2026-01-25 19:47:46] Starting ATLAS job with PandaID=6983344939
[2026-01-25 19:47:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:29:42 (32173): wrapper (7.7.26015): starting
20:29:42 (32173): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 20:29:42] Arguments: --nthreads 8
[2026-01-25 20:29:42] Threads: 8
[2026-01-25 20:29:42] This job has been restarted, cleaning up previous attempt
[2026-01-25 20:29:42] Checking for CVMFS
[2026-01-25 20:29:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 20:29:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 20:29:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 20:29:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 20:29:42] 2.11.2.0 2698 160484 89412 155527 2 9 11609808 20275200 1 130560 0 41816151 99.874 8701559 29241 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 20:29:42] CVMFS is ok
[2026-01-25 20:29:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 20:29:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 20:29:42] Further information can be found at the LHC@home message board.
[2026-01-25 20:29:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 20:29:42] Checking for apptainer binary...
[2026-01-25 20:29:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 20:29:42] Running /usr/bin/apptainer --version
[2026-01-25 20:29:43] apptainer version 1.3.2-1.el7
[2026-01-25 20:29:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 20:29:44] c-204-2.aglt2.org
[2026-01-25 20:29:44] apptainer works
[2026-01-25 20:29:44] Set ATHENA_PROC_NUMBER=8
[2026-01-25 20:29:44] Set ATHENA_CORE_NUMBER=8
[2026-01-25 20:29:44] Starting ATLAS job with PandaID=6983344939
[2026-01-25 20:29:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 22:35:36]  *** The last 200 lines of the pilot log: ***
[2026-01-25 22:35:36] 2026-01-26 03:35:03,998 | INFO     | this job has now completed (state=finished)
[2026-01-25 22:35:36] 2026-01-26 03:35:03,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 22:35:36] 2026-01-26 03:35:03,999 | INFO     | log transfer has been attempted: DONE
[2026-01-25 22:35:36] 2026-01-26 03:35:03,999 | INFO     | job 6983344939 has finished - writing final server update
[2026-01-25 22:35:36] 2026-01-26 03:35:03,999 | INFO     | total number of processed events: 400 (read)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,002 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983344939/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,002 | INFO     | extracted standard info from prmon json
[2026-01-25 22:35:36] 2026-01-26 03:35:04,002 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 22:35:36] 2026-01-26 03:35:04,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 22:35:36] 2026-01-26 03:35:04,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 22:35:36] 2026-01-26 03:35:04,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 22:35:36] 2026-01-26 03:35:04,006 | INFO     | fitting pss+swap vs Time
[2026-01-25 22:35:36] 2026-01-26 03:35:04,006 | INFO     | sum of square deviations: 576985702.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,007 | INFO     | sum of deviations: -2724817540.000003
[2026-01-25 22:35:36] 2026-01-26 03:35:04,007 | INFO     | mean x: 1769394748.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,007 | INFO     | mean y: 2557716.5691056913
[2026-01-25 22:35:36] 2026-01-26 03:35:04,007 | INFO     | intersect: 8358532271.609787
[2026-01-25 22:35:36] 2026-01-26 03:35:04,008 | INFO     | chi2: 1.6855806061288634
[2026-01-25 22:35:36] 2026-01-26 03:35:04,008 | INFO     | sum of square deviations: 509440249.5
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | sum of deviations: -2057224664.499997
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | mean x: 1769394595.5
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | mean y: 2559232.4830508474
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | intersect: 7147739077.750844
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | chi2: 1.6870172676851978
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | current chi2=1.6870172676851978 (change=-0.08523244460161639 %)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,009 | INFO     | right removable region: 117
[2026-01-25 22:35:36] 2026-01-26 03:35:04,010 | INFO     | sum of square deviations: 509440249.5
[2026-01-25 22:35:36] 2026-01-26 03:35:04,010 | INFO     | sum of deviations: -21788560079.5
[2026-01-25 22:35:36] 2026-01-26 03:35:04,010 | INFO     | mean x: 1769394900.5
[2026-01-25 22:35:36] 2026-01-26 03:35:04,011 | INFO     | mean y: 2599966.9576271186
[2026-01-25 22:35:36] 2026-01-26 03:35:04,011 | INFO     | intersect: 75678927331.6355
[2026-01-25 22:35:36] 2026-01-26 03:35:04,011 | INFO     | chi2: 0.1552301719476047
[2026-01-25 22:35:36] 2026-01-26 03:35:04,011 | INFO     | current chi2=0.1552301719476047 (change=90.79070016686363 %)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,011 | INFO     | sum of square deviations: 447383272.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,012 | INFO     | sum of deviations: -22819586868.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,012 | INFO     | mean x: 1769395053.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,012 | INFO     | mean y: 2602366.96460177
[2026-01-25 22:35:36] 2026-01-26 03:35:04,012 | INFO     | intersect: 90253773214.81642
[2026-01-25 22:35:36] 2026-01-26 03:35:04,012 | INFO     | chi2: 0.10877500316842131
[2026-01-25 22:35:36] 2026-01-26 03:35:04,013 | INFO     | current chi2=0.10877500316842131 (change=29.9266361663656 %)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,013 | INFO     | sum of square deviations: 390582207.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,013 | INFO     | sum of deviations: -20127456940.500004
[2026-01-25 22:35:36] 2026-01-26 03:35:04,013 | INFO     | mean x: 1769395205.5
[2026-01-25 22:35:36] 2026-01-26 03:35:04,014 | INFO     | mean y: 2595121.4166666665
[2026-01-25 22:35:36] 2026-01-26 03:35:04,014 | INFO     | intersect: 91182954009.16397
[2026-01-25 22:35:36] 2026-01-26 03:35:04,014 | INFO     | chi2: 0.10855567393550586
[2026-01-25 22:35:36] 2026-01-26 03:35:04,014 | INFO     | current chi2=0.10855567393550586 (change=0.2016356943477699 %)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,014 | INFO     | left removable region: 30
[2026-01-25 22:35:36] 2026-01-26 03:35:04,014 | INFO     | sum of square deviations: 204163828.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,015 | INFO     | sum of deviations: -9825014654.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,015 | INFO     | mean x: 1769395480.0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,015 | INFO     | mean y: 2566706.942528736
[2026-01-25 22:35:36] 2026-01-26 03:35:04,015 | INFO     | intersect: 85151521299.04277
[2026-01-25 22:35:36] 2026-01-26 03:35:04,015 | INFO     | chi2: 0.09320592048406422
[2026-01-25 22:35:36] 2026-01-26 03:35:04,016 | INFO     | current memory leak: -48.12 B/s (using 87 data points, chi2=0.09)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,016 | INFO     | could have reported an average CPU frequency of 1729 MHz (8 samples)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,016 | INFO     | ..............................
[2026-01-25 22:35:36] 2026-01-26 03:35:04,016 | INFO     | . Timing measurements:
[2026-01-25 22:35:36] 2026-01-26 03:35:04,016 | INFO     | . get job = 0 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,016 | INFO     | . initial setup = 1 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,017 | INFO     | . payload setup = 8 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,017 | INFO     | . stage-in = 0 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,017 | INFO     | . payload execution = 7474 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,017 | INFO     | . stage-out = 0 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,017 | INFO     | . log creation = 0 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,017 | INFO     | ..............................
[2026-01-25 22:35:36] 2026-01-26 03:35:04,099 | INFO     | 
[2026-01-25 22:35:36] 2026-01-26 03:35:04,100 | INFO     | job summary report
[2026-01-25 22:35:36] 2026-01-26 03:35:04,100 | INFO     | --------------------------------------------------
[2026-01-25 22:35:36] 2026-01-26 03:35:04,100 | INFO     | PanDA job id: 6983344939
[2026-01-25 22:35:36] 2026-01-26 03:35:04,100 | INFO     | task id: 48317872
[2026-01-25 22:35:36] 2026-01-26 03:35:04,101 | INFO     | errors: (none)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,101 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 22:35:36] 2026-01-26 03:35:04,101 | INFO     | pilot state: finished 
[2026-01-25 22:35:36] 2026-01-26 03:35:04,101 | INFO     | transexitcode: 0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,101 | INFO     | exeerrorcode: 0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,102 | INFO     | exeerrordiag: 
[2026-01-25 22:35:36] 2026-01-26 03:35:04,102 | INFO     | exitcode: 0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,102 | INFO     | exitmsg: OK
[2026-01-25 22:35:36] 2026-01-26 03:35:04,102 | INFO     | cpuconsumptiontime: 54746 s
[2026-01-25 22:35:36] 2026-01-26 03:35:04,102 | INFO     | nevents: 400
[2026-01-25 22:35:36] 2026-01-26 03:35:04,102 | INFO     | neventsw: 0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,103 | INFO     | pid: 6233
[2026-01-25 22:35:36] 2026-01-26 03:35:04,103 | INFO     | pgrp: 6233
[2026-01-25 22:35:36] 2026-01-26 03:35:04,103 | INFO     | corecount: 8
[2026-01-25 22:35:36] 2026-01-26 03:35:04,103 | INFO     | event service: False
[2026-01-25 22:35:36] 2026-01-26 03:35:04,103 | INFO     | sizes: {0: 2283791, 1: 2284252, 12: 2284252, 7486: 2311784, 7488: 2320782, 7491: 2321160}
[2026-01-25 22:35:36] 2026-01-26 03:35:04,103 | INFO     | --------------------------------------------------
[2026-01-25 22:35:36] 2026-01-26 03:35:04,104 | INFO     | 
[2026-01-25 22:35:36] 2026-01-26 03:35:04,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 22:35:36] 2026-01-26 03:35:04,133 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,133 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,133 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,133 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,136 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,136 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 22:35:36] 2026-01-26 03:35:04,137 | INFO     | job 6983344939 has completed (purged errors)
[2026-01-25 22:35:36] 2026-01-26 03:35:04,137 | INFO     | overall cleanup function is called
[2026-01-25 22:35:36] 2026-01-26 03:35:05,145 | INFO     | --- collectZombieJob: --- 10, [6233]
[2026-01-25 22:35:36] 2026-01-26 03:35:05,145 | INFO     | zombie collector waiting for pid 6233
[2026-01-25 22:35:36] 2026-01-26 03:35:05,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 22:35:36] 2026-01-26 03:35:05,146 | INFO     | collected zombie processes
[2026-01-25 22:35:36] 2026-01-26 03:35:05,146 | INFO     | will attempt to kill all subprocesses of pid=6233
[2026-01-25 22:35:36] 2026-01-26 03:35:05,219 | INFO     | process IDs to be killed: [6233] (in reverse order)
[2026-01-25 22:35:36] 2026-01-26 03:35:05,274 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 22:35:36] 2026-01-26 03:35:05,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 22:35:36] 2026-01-26 03:35:05,278 | INFO     | did not find any defunct processes belonging to 6233
[2026-01-25 22:35:36] 2026-01-26 03:35:05,280 | INFO     | did not find any defunct processes belonging to 6233
[2026-01-25 22:35:36] 2026-01-26 03:35:05,281 | INFO     | ready for new job
[2026-01-25 22:35:36] 2026-01-26 03:35:05,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 22:35:36] 2026-01-26 03:35:05,282 | INFO     | **************************************
[2026-01-25 22:35:36] 2026-01-26 03:35:05,283 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 22:35:36] 2026-01-26 03:35:05,283 | INFO     | **************************************
[2026-01-25 22:35:36] 2026-01-26 03:35:05,283 | INFO     | 
[2026-01-25 22:35:36] 2026-01-26 03:35:05,283 | INFO     | architecture information:
[2026-01-25 22:35:36] 2026-01-26 03:35:05,284 | INFO     | executing command: cat /etc/os-release
[2026-01-25 22:35:36] 2026-01-26 03:35:05,302 | INFO     | cat /etc/os-release:
[2026-01-25 22:35:36] NAME="CentOS Linux"
[2026-01-25 22:35:36] VERSION="7 (Core)"
[2026-01-25 22:35:36] ID="centos"
[2026-01-25 22:35:36] ID_LIKE="rhel fedora"
[2026-01-25 22:35:36] VERSION_ID="7"
[2026-01-25 22:35:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 22:35:36] ANSI_COLOR="0;31"
[2026-01-25 22:35:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 22:35:36] HOME_URL="https://www.centos.org/"
[2026-01-25 22:35:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 22:35:36] 
[2026-01-25 22:35:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 22:35:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 22:35:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 22:35:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 22:35:36] 
[2026-01-25 22:35:36] 2026-01-26 03:35:05,302 | INFO     | **************************************
[2026-01-25 22:35:36] 2026-01-26 03:35:05,806 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 22:35:36] 2026-01-26 03:35:05,825 | INFO     | sufficient remaining disk space (18023972864 B)
[2026-01-25 22:35:36] 2026-01-26 03:35:05,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 22:35:36] 2026-01-26 03:35:05,826 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 22:35:36] 2026-01-26 03:35:05,826 | INFO     | update_server=False
[2026-01-25 22:35:36] 2026-01-26 03:35:05,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 22:35:36] 2026-01-26 03:35:05,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 22:35:36] 2026-01-26 03:35:05,827 | INFO     | aborting loop
[2026-01-25 22:35:36] 2026-01-26 03:35:05,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 22:35:36] 2026-01-26 03:35:05,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 22:35:36] 2026-01-26 03:35:05,998 | INFO     | all data control threads have been joined
[2026-01-25 22:35:36] 2026-01-26 03:35:06,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 22:35:36] 2026-01-26 03:35:06,832 | INFO     | [job] retrieve thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:06,833 | INFO     | [job] queue monitor thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:06,833 | INFO     | [job] job monitor thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:07,002 | INFO     | [data] control thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:07,074 | INFO     | [job] validate thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:07,113 | INFO     | all payload control threads have been joined
[2026-01-25 22:35:36] 2026-01-26 03:35:07,159 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:07,172 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:07,400 | INFO     | all job control threads have been joined
[2026-01-25 22:35:36] 2026-01-26 03:35:07,653 | INFO     | [data] copytool_in thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:07,746 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:08,119 | INFO     | [payload] control thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:08,308 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:08,315 | INFO     | [payload] validate_post thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:08,388 | INFO     | [data] copytool_out thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:08,405 | INFO     | [job] control thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:08,421 | INFO     | [payload] failed_post thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:09,834 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 22:35:36] 2026-01-26 03:35:12,568 | INFO     | [monitor] cgroup control has ended
[2026-01-25 22:35:36] 2026-01-26 03:35:14,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554454742848)>', '<ExcThread(monitor, started 140553811392256)>']
[2026-01-25 22:35:36] 2026-01-26 03:35:19,329 | INFO     | all workflow threads have been joined
[2026-01-25 22:35:36] 2026-01-26 03:35:19,330 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 22:35:36] 2026-01-26 03:35:19,334 | INFO     | traces error code: 0
[2026-01-25 22:35:36] 2026-01-26 03:35:19,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 22:35:36] 2026-01-26 03:35:35,688 | INFO     | PID=3588 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 22:35:36] 2026-01-26 03:35:35,689 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 22:35:36] 2026-01-26 03:35:35,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 22:35:36] 2026-01-26 03:35:35,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 22:35:36] 2026-01-26 03:35:35,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 22:35:36] 2026-01-26 03:35:35,690 | INFO     | [monitor] control thread has ended
[2026-01-25 22:35:36] 2026-01-26 03:35:35,804 [wrapper] ==== pilot stdout END ====
[2026-01-25 22:35:36] 2026-01-26 03:35:35,808 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 22:35:36] 2026-01-26 03:35:35,813 [wrapper] pilotpid: 3588
[2026-01-25 22:35:36] 2026-01-26 03:35:35,818 [wrapper] Pilot exit status: 0
[2026-01-25 22:35:36] 2026-01-26 03:35:35,834 [wrapper] pandaids: 6983344939 6983344939
[2026-01-25 22:35:36] 2026-01-26 03:35:35,878 [wrapper] cleanup supervisor_pilot 25534 3589
[2026-01-25 22:35:36] 2026-01-26 03:35:35,883 [wrapper] Test setup, not cleaning
[2026-01-25 22:35:36] 2026-01-26 03:35:35,888 [wrapper] apfmon messages muted
[2026-01-25 22:35:36] 2026-01-26 03:35:35,893 [wrapper] ==== wrapper stdout END ====
[2026-01-25 22:35:36] 2026-01-26 03:35:35,897 [wrapper] ==== wrapper stderr END ====
[2026-01-25 22:35:36]  *** Error codes and diagnostics ***
[2026-01-25 22:35:36]     "exeErrorCode": 0,
[2026-01-25 22:35:36]     "exeErrorDiag": "",
[2026-01-25 22:35:36]     "pilotErrorCode": 0,
[2026-01-25 22:35:36]     "pilotErrorDiag": "",
[2026-01-25 22:35:36]  *** Listing of results directory ***
[2026-01-25 22:35:36] total 1156656
[2026-01-25 22:35:36] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 15:48 queuedata.json
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-25 22:35:36] -rwx------ 1 boincer umatlas     36322 Jan 25 15:48 runpilot2-wrapper.sh
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas       100 Jan 25 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 22:35:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan 25 19:47 run_atlas
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas       105 Jan 25 19:47 job.xml
[2026-01-25 22:35:36] -rw-r--r-- 3 boincer umatlas 497970907 Jan 25 19:47 EVNT.48317869._000024.pool.root.1
[2026-01-25 22:35:36] -rw-r--r-- 3 boincer umatlas 497970907 Jan 25 19:47 ATLAS.root_0
[2026-01-25 22:35:36] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 19:47 start_atlas.sh
[2026-01-25 22:35:36] drwxrwx--x 2 boincer umatlas      4096 Jan 25 19:47 shared
[2026-01-25 22:35:36] -rw-r--r-- 2 boincer umatlas    597746 Jan 25 19:47 input.tar.gz
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas         0 Jan 25 19:47 boinc_lockfile
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas   1516246 Jan 25 19:48 agis_ddmendpoints.agis.ALL.json
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas      2510 Jan 25 20:29 pandaJob.out
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas        57 Jan 25 20:29 setup.sh.local
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas   1004246 Jan 25 20:29 agis_schedconf.cvmfs.json
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas       432 Jan 25 20:29 workernode_map.json
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas      5909 Jan 25 22:28 init_data.xml
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas 181702808 Jan 25 22:34 HITS.48317872._001158.pool.root.1
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas       530 Jan 25 22:34 boinc_task_state.xml
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas      1048 Jan 25 22:34 memory_monitor_summary.json
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas    355126 Jan 25 22:35 log.48317872._001158.job.log.tgz.1
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas      6396 Jan 25 22:35 heartbeat.json
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas      8192 Jan 25 22:35 boinc_mmap_file
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas        27 Jan 25 22:35 wrapper_checkpoint.txt
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas       744 Jan 25 22:35 pilotlog.txt
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas        96 Jan 25 22:35 pilot_heartbeat.json
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas   1063993 Jan 25 22:35 log.48317872._001158.job.log.1
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas       357 Jan 25 22:35 output.list
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas       620 Jan 25 22:35 runtime_log
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas   1433600 Jan 25 22:35 result.tar.gz
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas      9421 Jan 25 22:35 runtime_log.err
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas       782 Jan 25 22:35 75WNDmfDM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7j1KDmn1KG3n.diag
[2026-01-25 22:35:36] -rw-r--r-- 1 boincer umatlas     23150 Jan 25 22:35 stderr.txt
[2026-01-25 22:35:36] HITS file was successfully produced:
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas 181702808 Jan 25 22:34 shared/HITS.pool.root.1
[2026-01-25 22:35:36]  *** Contents of shared directory: ***
[2026-01-25 22:35:36] total 665752
[2026-01-25 22:35:36] -rw-r--r-- 3 boincer umatlas 497970907 Jan 25 19:47 ATLAS.root_0
[2026-01-25 22:35:36] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 19:47 start_atlas.sh
[2026-01-25 22:35:36] -rw-r--r-- 2 boincer umatlas    597746 Jan 25 19:47 input.tar.gz
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas 181702808 Jan 25 22:34 HITS.pool.root.1
[2026-01-25 22:35:36] -rw------- 1 boincer umatlas   1433600 Jan 25 22:35 result.tar.gz
22:35:37 (32173): run_atlas exited; CPU time 54692.908941
22:35:37 (32173): called boinc_finish(0)

</stderr_txt>
]]>

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