Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
21:13:46 (1240446): wrapper (7.7.26015): starting
21:13:46 (1240446): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 21:13:46] Arguments: --nthreads 4
[2026-01-26 21:13:46] Threads: 4
[2026-01-26 21:13:46] Checking for CVMFS
[2026-01-26 21:13:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:13:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:13:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:13:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:13:46] 2.13.3.0 12410 1324 46608 155557 1 49 20911586 33554432 0 130560 0 824814 99.987 54757 200 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-26 21:13:46] CVMFS is ok
[2026-01-26 21:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:13:46] Checking for apptainer binary...
[2026-01-26 21:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:13:46] Running /usr/bin/apptainer --version
[2026-01-26 21:13:46] apptainer version 1.4.5
[2026-01-26 21:13:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:13:47] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-26 21:13:47] apptainer works
[2026-01-26 21:13:47] Set ATHENA_PROC_NUMBER=4
[2026-01-26 21:13:47] Set ATHENA_CORE_NUMBER=4
[2026-01-26 21:13:47] Starting ATLAS job with PandaID=6983449009
[2026-01-26 21:13:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:25:09]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:25:09]  ddmendpoint=NDGF-T1_DATADISK
[2026-01-26 22:25:09]  ddmendpoint_alt=None
[2026-01-26 22:25:09]  direct_access_lan=False
[2026-01-26 22:25:09]  direct_access_wan=False
[2026-01-26 22:25:09]  domain=
[2026-01-26 22:25:09]  filesize=271297
[2026-01-26 22:25:09]  filetype=log
[2026-01-26 22:25:09]  guid=4f7985dd-7365-45cf-8c87-56205ff35cf4
[2026-01-26 22:25:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 22:25:09]  is_altstaged=None
[2026-01-26 22:25:09]  is_tar=False
[2026-01-26 22:25:09]  lfn=log.48298567._000121.job.log.tgz.1
[2026-01-26 22:25:09]  mtime=0
[2026-01-26 22:25:09]  protocol_id=None
[2026-01-26 22:25:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 22:25:09]  replicas=None
[2026-01-26 22:25:09]  scope=mc23_13p6TeV
[2026-01-26 22:25:09]  status=None
[2026-01-26 22:25:09]  status_code=0
[2026-01-26 22:25:09]  storage_token=
[2026-01-26 22:25:09]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6983449009/log.48298567._000121.job.log.tgz.1
[2026-01-26 22:25:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/0b/log.48298567._000121.job.log.tgz.1
[2026-01-26 22:25:09]  workdir=None
[2026-01-26 22:25:09] ]
[2026-01-26 22:25:09] 2026-01-26 20:24:06,245 | INFO     | transferring file log.48298567._000121.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6983449009/log.48298567._000121.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-26 22:25:09] 2026-01-26 20:24:06,245 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6983449009/log.48298567._000121.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48298567._000121.job
[2026-01-26 22:25:09] 2026-01-26 20:24:06,253 | INFO     | adding to output.list: log.48298567._000121.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/0b/log.48298567._000121.job.log.tg
[2026-01-26 22:25:09] 2026-01-26 20:24:06,253 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 22:25:09] 2026-01-26 20:24:06,253 | INFO     | summary of transferred files:
[2026-01-26 22:25:09] 2026-01-26 20:24:06,253 | INFO     |  -- lfn=log.48298567._000121.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 22:25:09] 2026-01-26 20:24:06,254 | INFO     | stage-out finished correctly
[2026-01-26 22:25:09] 2026-01-26 20:24:07,682 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 22:25:09] 2026-01-26 20:24:07,710 | INFO     | job 6983449009 has state=finished
[2026-01-26 22:25:09] 2026-01-26 20:24:07,710 | INFO     | preparing for final server update for job 6983449009 in state='finished'
[2026-01-26 22:25:09] 2026-01-26 20:24:07,711 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6983449009/jobReport.json
[2026-01-26 22:25:09] 2026-01-26 20:24:07,712 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-26 22:25:09] 2026-01-26 20:24:07,712 | INFO     | this job has now completed (state=finished)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,712 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,712 | INFO     | log transfer has been attempted: DONE
[2026-01-26 22:25:09] 2026-01-26 20:24:07,712 | INFO     | job 6983449009 has finished - writing final server update
[2026-01-26 22:25:09] 2026-01-26 20:24:07,712 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,714 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6983449009/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,714 | INFO     | extracted standard info from prmon json
[2026-01-26 22:25:09] 2026-01-26 20:24:07,714 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:25:09] 2026-01-26 20:24:07,714 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:25:09] 2026-01-26 20:24:07,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:25:09] 2026-01-26 20:24:07,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | sum of square deviations: 73882315.5
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | sum of deviations: -1856141245.0
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | mean x: 1769457023.5
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | mean y: 2390241.5483870967
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | intersect: 44456359237.32633
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | chi2: 0.022954470034232632
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | current memory leak: -25.12 B/s (using 62 data points, chi2=0.02)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | could have reported an average CPU frequency of 4223 MHz (6 samples)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | ..............................
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . Timing measurements:
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . get job = 0 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . initial setup = 3 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . payload setup = 7 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . stage-in = 0 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . payload execution = 4188 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . stage-out = 0 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | . log creation = 0 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,715 | INFO     | ..............................
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | 
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | job summary report
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | --------------------------------------------------
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | PanDA job id: 6983449009
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | task id: 48298567
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | errors: (none)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | pilot state: finished 
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | transexitcode: 0
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | exeerrorcode: 0
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | exeerrordiag: 
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | exitcode: 0
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | exitmsg: OK
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | cpuconsumptiontime: 15850 s
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | nevents: 400
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | neventsw: 0
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | pid: 1264096
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | pgrp: 1264096
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | corecount: 4
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | event service: False
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | sizes: {0: 2284363, 10: 2284363, 4199: 2310435, 4200: 2319433, 4201: 2319489, 4202: 2319683}
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | --------------------------------------------------
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | 
[2026-01-26 22:25:09] 2026-01-26 20:24:07,743 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-26 22:25:09] 2026-01-26 20:24:07,751 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | job 6983449009 has completed (purged errors)
[2026-01-26 22:25:09] 2026-01-26 20:24:07,752 | INFO     | overall cleanup function is called
[2026-01-26 22:25:09] 2026-01-26 20:24:08,760 | INFO     | --- collectZombieJob: --- 10, [1264096]
[2026-01-26 22:25:09] 2026-01-26 20:24:08,760 | INFO     | zombie collector waiting for pid 1264096
[2026-01-26 22:25:09] 2026-01-26 20:24:08,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:25:09] 2026-01-26 20:24:08,761 | INFO     | collected zombie processes
[2026-01-26 22:25:09] 2026-01-26 20:24:08,761 | INFO     | will attempt to kill all subprocesses of pid=1264096
[2026-01-26 22:25:09] 2026-01-26 20:24:08,857 | INFO     | process IDs to be killed: [1264096] (in reverse order)
[2026-01-26 22:25:09] 2026-01-26 20:24:08,887 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:25:09] 2026-01-26 20:24:08,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:25:09] 2026-01-26 20:24:08,890 | INFO     | did not find any defunct processes belonging to 1264096
[2026-01-26 22:25:09] 2026-01-26 20:24:08,892 | INFO     | did not find any defunct processes belonging to 1264096
[2026-01-26 22:25:09] 2026-01-26 20:24:08,892 | INFO     | ready for new job
[2026-01-26 22:25:09] 2026-01-26 20:24:08,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:25:09] 2026-01-26 20:24:08,892 | INFO     | **************************************
[2026-01-26 22:25:09] 2026-01-26 20:24:08,893 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:25:09] 2026-01-26 20:24:08,893 | INFO     | **************************************
[2026-01-26 22:25:09] 2026-01-26 20:24:08,893 | INFO     | 
[2026-01-26 22:25:09] 2026-01-26 20:24:08,893 | INFO     | architecture information:
[2026-01-26 22:25:09] 2026-01-26 20:24:08,893 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:25:09] 2026-01-26 20:24:08,899 | INFO     | cat /etc/os-release:
[2026-01-26 22:25:09] NAME="CentOS Linux"
[2026-01-26 22:25:09] VERSION="7 (Core)"
[2026-01-26 22:25:09] ID="centos"
[2026-01-26 22:25:09] ID_LIKE="rhel fedora"
[2026-01-26 22:25:09] VERSION_ID="7"
[2026-01-26 22:25:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:25:09] ANSI_COLOR="0;31"
[2026-01-26 22:25:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:25:09] HOME_URL="https://www.centos.org/"
[2026-01-26 22:25:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:25:09] 
[2026-01-26 22:25:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:25:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:25:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:25:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:25:09] 
[2026-01-26 22:25:09] 2026-01-26 20:24:08,899 | INFO     | **************************************
[2026-01-26 22:25:09] 2026-01-26 20:24:09,402 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-26 22:25:09] 2026-01-26 20:24:09,408 | INFO     | sufficient remaining disk space (68089282560 B)
[2026-01-26 22:25:09] 2026-01-26 20:24:09,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:25:09] 2026-01-26 20:24:09,408 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:25:09] 2026-01-26 20:24:09,408 | INFO     | update_server=False
[2026-01-26 22:25:09] 2026-01-26 20:24:09,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:25:09] 2026-01-26 20:24:09,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:25:09] 2026-01-26 20:24:09,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:25:09] 2026-01-26 20:24:09,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:25:09] 2026-01-26 20:24:09,416 | INFO     | all job control threads have been joined
[2026-01-26 22:25:09] 2026-01-26 20:24:09,556 | INFO     | all payload control threads have been joined
[2026-01-26 22:25:09] 2026-01-26 20:24:09,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:25:09] 2026-01-26 20:24:09,740 | INFO     | aborting loop
[2026-01-26 22:25:09] 2026-01-26 20:24:10,331 | INFO     | all data control threads have been joined
[2026-01-26 22:25:09] 2026-01-26 20:24:10,414 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:10,414 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:10,421 | INFO     | [job] control thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:10,561 | INFO     | [payload] control thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:10,745 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,048 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,258 | INFO     | [job] validate thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,298 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,333 | INFO     | [data] control thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,373 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,378 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,413 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,471 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:11,981 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:13,414 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:25:09] 2026-01-26 20:24:39,336 | INFO     | PID=1247227 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:25:09] 2026-01-26 20:24:39,336 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:25:09] 2026-01-26 20:24:39,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:25:09] 2026-01-26 20:24:39,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:25:09] 2026-01-26 20:25:01,938 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:25:09] 2026-01-26 20:25:03,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702431446848)>', '<ExcThread(monitor, started 139701788862208)>']
[2026-01-26 22:25:09] 2026-01-26 20:25:04,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:25:09] 2026-01-26 20:25:04,460 | INFO     | [monitor] control thread has ended
[2026-01-26 22:25:09] 2026-01-26 20:25:08,969 | INFO     | all workflow threads have been joined
[2026-01-26 22:25:09] 2026-01-26 20:25:08,969 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:25:09] 2026-01-26 20:25:08,969 | INFO     | traces error code: 0
[2026-01-26 22:25:09] 2026-01-26 20:25:08,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:25:09] 2026-01-26 20:25:09,021 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:25:09] 2026-01-26 20:25:09,022 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:25:09] 2026-01-26 20:25:09,024 [wrapper] pilotpid: 1247227
[2026-01-26 22:25:09] 2026-01-26 20:25:09,025 [wrapper] Pilot exit status: 0
[2026-01-26 22:25:09] 2026-01-26 20:25:09,030 [wrapper] pandaids: 6983449009
[2026-01-26 22:25:09] 2026-01-26 20:25:09,054 [wrapper] cleanup supervisor_pilot 1365253 1247228
[2026-01-26 22:25:09] 2026-01-26 20:25:09,057 [wrapper] Test setup, not cleaning
[2026-01-26 22:25:09] 2026-01-26 20:25:09,058 [wrapper] apfmon messages muted
[2026-01-26 22:25:09] 2026-01-26 20:25:09,059 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:25:09] 2026-01-26 20:25:09,061 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:25:09]  *** Error codes and diagnostics ***
[2026-01-26 22:25:09]     "exeErrorCode": 0,
[2026-01-26 22:25:09]     "exeErrorDiag": "",
[2026-01-26 22:25:09]     "pilotErrorCode": 0,
[2026-01-26 22:25:09]     "pilotErrorDiag": "",
[2026-01-26 22:25:09]  *** Listing of results directory ***
[2026-01-26 22:25:09] total 410352
[2026-01-26 22:25:09] -rw-r--r-- 1 ek ek      5111 Jan 25 22:48 queuedata.json
[2026-01-26 22:25:09] -rw-r--r-- 1 ek ek    584422 Jan 25 22:48 pilot3.tar.gz
[2026-01-26 22:25:09] -rwx------ 1 ek ek     36322 Jan 25 22:48 runpilot2-wrapper.sh
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek       100 Jan 26 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:25:09] -rwxr-xr-x 1 ek ek      7986 Jan 26 21:13 run_atlas
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek       105 Jan 26 21:13 job.xml
[2026-01-26 22:25:09] -rw-r--r-- 2 ek ek 247435068 Jan 26 21:13 EVNT.48298565._000005.pool.root.1
[2026-01-26 22:25:09] drwxrwx--x 2 ek ek      4096 Jan 26 21:13 shared
[2026-01-26 22:25:09] -rw-r--r-- 2 ek ek    597765 Jan 26 21:13 input.tar.gz
[2026-01-26 22:25:09] -rw-r--r-- 2 ek ek     15845 Jan 26 21:13 start_atlas.sh
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek         0 Jan 26 21:13 boinc_setup_complete
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek      9841 Jan 26 21:13 init_data.xml
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek         0 Jan 26 21:13 boinc_lockfile
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek      2613 Jan 26 21:13 pandaJob.out
[2026-01-26 22:25:09] -rw------- 1 ek ek        50 Jan 26 21:13 setup.sh.local
[2026-01-26 22:25:09] -rw------- 1 ek ek   1006384 Jan 26 21:13 agis_schedconf.cvmfs.json
[2026-01-26 22:25:09] -rw------- 1 ek ek   1516246 Jan 26 21:13 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:25:09] -rw------- 1 ek ek       432 Jan 26 21:13 workernode_map.json
[2026-01-26 22:25:09] drwx------ 5 ek ek      4096 Jan 26 21:13 pilot3
[2026-01-26 22:25:09] -rw------- 1 ek ek 167026959 Jan 26 22:23 HITS.48298567._000121.pool.root.1
[2026-01-26 22:25:09] -rw------- 1 ek ek      1030 Jan 26 22:24 memory_monitor_summary.json
[2026-01-26 22:25:09] -rw------- 1 ek ek    271297 Jan 26 22:24 log.48298567._000121.job.log.tgz.1
[2026-01-26 22:25:09] -rw------- 1 ek ek      6321 Jan 26 22:24 heartbeat.json
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek       530 Jan 26 22:24 boinc_task_state.xml
[2026-01-26 22:25:09] -rw------- 1 ek ek        95 Jan 26 22:24 pilot_heartbeat.json
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek        27 Jan 26 22:24 wrapper_checkpoint.txt
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek      8192 Jan 26 22:24 boinc_mmap_file
[2026-01-26 22:25:09] -rw------- 1 ek ek      4744 Jan 26 22:25 pilotlog.txt
[2026-01-26 22:25:09] -rw------- 1 ek ek    621733 Jan 26 22:25 log.48298567._000121.job.log.1
[2026-01-26 22:25:09] -rw------- 1 ek ek       357 Jan 26 22:25 output.list
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek       620 Jan 26 22:25 runtime_log
[2026-01-26 22:25:09] -rw------- 1 ek ek    911360 Jan 26 22:25 result.tar.gz
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek      9501 Jan 26 22:25 runtime_log.err
[2026-01-26 22:25:09] -rw------- 1 ek ek       665 Jan 26 22:25 F9WMDmKDM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMH8KDmdM8tRn.diag
[2026-01-26 22:25:09] -rw-rw-r-- 1 ek ek     20663 Jan 26 22:25 stderr.txt
[2026-01-26 22:25:09] HITS file was successfully produced:
[2026-01-26 22:25:09] -rw------- 1 ek ek 167026959 Jan 26 22:23 shared/HITS.pool.root.1
[2026-01-26 22:25:09]  *** Contents of shared directory: ***
[2026-01-26 22:25:09] total 406252
[2026-01-26 22:25:09] -rw-r--r-- 2 ek ek 247435068 Jan 26 21:13 ATLAS.root_0
[2026-01-26 22:25:09] -rw-r--r-- 2 ek ek    597765 Jan 26 21:13 input.tar.gz
[2026-01-26 22:25:09] -rw-r--r-- 2 ek ek     15845 Jan 26 21:13 start_atlas.sh
[2026-01-26 22:25:09] -rw------- 1 ek ek 167026959 Jan 26 22:23 HITS.pool.root.1
[2026-01-26 22:25:09] -rw------- 1 ek ek    911360 Jan 26 22:25 result.tar.gz
22:25:10 (1240446): run_atlas exited; CPU time 15889.470623
22:25:10 (1240446): called boinc_finish(0)

</stderr_txt>
]]>

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