Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
22:25:13 (1372828): wrapper (7.7.26015): starting
22:25:13 (1372828): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 22:25:13] Arguments: --nthreads 4
[2026-01-26 22:25:13] Threads: 4
[2026-01-26 22:25:13] Checking for CVMFS
[2026-01-26 22:25:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:25:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:25:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:25:13] 2.13.3.0 12410 1395 46616 155561 2 49 20947690 33554432 0 130560 0 864447 99.987 60136 205 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-26 22:25:13] CVMFS is ok
[2026-01-26 22:25:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:25:13] Checking for apptainer binary...
[2026-01-26 22:25:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:25:13] Running /usr/bin/apptainer --version
[2026-01-26 22:25:13] apptainer version 1.4.5
[2026-01-26 22:25:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:25:13] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-26 22:25:13] apptainer works
[2026-01-26 22:25:13] Set ATHENA_PROC_NUMBER=4
[2026-01-26 22:25:13] Set ATHENA_CORE_NUMBER=4
[2026-01-26 22:25:13] Starting ATLAS job with PandaID=6983448952
[2026-01-26 22:25:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:36:35]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:36:35]  filetype=log
[2026-01-26 23:36:35]  guid=971d91fc-f8de-474f-9520-401f04e479da
[2026-01-26 23:36:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 23:36:35]  is_altstaged=None
[2026-01-26 23:36:35]  is_tar=False
[2026-01-26 23:36:35]  lfn=log.48298567._000064.job.log.tgz.1
[2026-01-26 23:36:35]  mtime=0
[2026-01-26 23:36:35]  protocol_id=None
[2026-01-26 23:36:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 23:36:35]  replicas=None
[2026-01-26 23:36:35]  scope=mc23_13p6TeV
[2026-01-26 23:36:35]  status=None
[2026-01-26 23:36:35]  status_code=0
[2026-01-26 23:36:35]  storage_token=
[2026-01-26 23:36:35]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6983448952/log.48298567._000064.job.log.tgz.1
[2026-01-26 23:36:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/fd/log.48298567._000064.job.log.tgz.1
[2026-01-26 23:36:35]  workdir=None
[2026-01-26 23:36:35] ]
[2026-01-26 23:36:35] 2026-01-26 21:36:00,993 | INFO     | transferring file log.48298567._000064.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6983448952/log.48298567._000064.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-26 23:36:35] 2026-01-26 21:36:00,993 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6983448952/log.48298567._000064.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48298567._000064.job
[2026-01-26 23:36:35] 2026-01-26 21:36:01,003 | INFO     | adding to output.list: log.48298567._000064.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/fd/log.48298567._000064.job.log.tg
[2026-01-26 23:36:35] 2026-01-26 21:36:01,003 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 23:36:35] 2026-01-26 21:36:01,003 | INFO     | summary of transferred files:
[2026-01-26 23:36:35] 2026-01-26 21:36:01,003 | INFO     |  -- lfn=log.48298567._000064.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 23:36:35] 2026-01-26 21:36:01,003 | INFO     | stage-out finished correctly
[2026-01-26 23:36:35] 2026-01-26 21:36:01,993 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 23:36:35] 2026-01-26 21:36:02,286 | INFO     | time since job start (4240s) is within the limit (349056.0s)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,454 | INFO     | job 6983448952 has state=finished
[2026-01-26 23:36:35] 2026-01-26 21:36:02,454 | INFO     | preparing for final server update for job 6983448952 in state='finished'
[2026-01-26 23:36:35] 2026-01-26 21:36:02,454 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6983448952/jobReport.json
[2026-01-26 23:36:35] 2026-01-26 21:36:02,455 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-26 23:36:35] 2026-01-26 21:36:02,455 | INFO     | this job has now completed (state=finished)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,455 | INFO     | log transfer has been attempted: DONE
[2026-01-26 23:36:35] 2026-01-26 21:36:02,455 | INFO     | job 6983448952 has finished - writing final server update
[2026-01-26 23:36:35] 2026-01-26 21:36:02,456 | INFO     | total number of processed events: 400 (read)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,457 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6983448952/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | INFO     | extracted standard info from prmon json
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | INFO     | fitting pss+swap vs Time
[2026-01-26 23:36:35] 2026-01-26 21:36:02,458 | INFO     | sum of square deviations: 77515872.0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | sum of deviations: -9932883577.0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | mean x: 1769461335.0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | mean y: 2673548.507936508
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | intersect: 226741443055.71277
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | chi2: 0.1365918208198983
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | current memory leak: -128.14 B/s (using 63 data points, chi2=0.14)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | could have reported an average CPU frequency of 4163 MHz (6 samples)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | ..............................
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . Timing measurements:
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . get job = 0 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . initial setup = 4 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . payload setup = 2 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . stage-in = 0 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . payload execution = 4220 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . stage-out = 0 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | . log creation = 0 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,459 | INFO     | ..............................
[2026-01-26 23:36:35] 2026-01-26 21:36:02,488 | INFO     | 
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | job summary report
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | --------------------------------------------------
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | PanDA job id: 6983448952
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | task id: 48298567
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | errors: (none)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | pilot state: finished 
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | transexitcode: 0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | exeerrorcode: 0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | exeerrordiag: 
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | exitcode: 0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | exitmsg: OK
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | cpuconsumptiontime: 15960 s
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | nevents: 400
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | neventsw: 0
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | pid: 1381309
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | pgrp: 1381309
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | corecount: 4
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | event service: False
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | sizes: {0: 2284359, 11: 2284359, 4225: 2310554, 4226: 2310553, 4227: 2319607, 4228: 2319985}
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | --------------------------------------------------
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | 
[2026-01-26 23:36:35] 2026-01-26 21:36:02,489 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:36:35] 2026-01-26 21:36:02,498 | INFO     | job 6983448952 has completed (purged errors)
[2026-01-26 23:36:35] 2026-01-26 21:36:02,499 | INFO     | overall cleanup function is called
[2026-01-26 23:36:35] 2026-01-26 21:36:03,505 | INFO     | --- collectZombieJob: --- 10, [1381309]
[2026-01-26 23:36:35] 2026-01-26 21:36:03,505 | INFO     | zombie collector waiting for pid 1381309
[2026-01-26 23:36:35] 2026-01-26 21:36:03,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:36:35] 2026-01-26 21:36:03,506 | INFO     | collected zombie processes
[2026-01-26 23:36:35] 2026-01-26 21:36:03,506 | INFO     | will attempt to kill all subprocesses of pid=1381309
[2026-01-26 23:36:35] 2026-01-26 21:36:03,600 | INFO     | process IDs to be killed: [1381309] (in reverse order)
[2026-01-26 23:36:35] 2026-01-26 21:36:03,633 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:36:35] 2026-01-26 21:36:03,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:36:35] 2026-01-26 21:36:03,635 | INFO     | did not find any defunct processes belonging to 1381309
[2026-01-26 23:36:35] 2026-01-26 21:36:03,637 | INFO     | did not find any defunct processes belonging to 1381309
[2026-01-26 23:36:35] 2026-01-26 21:36:03,637 | INFO     | ready for new job
[2026-01-26 23:36:35] 2026-01-26 21:36:03,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:36:35] 2026-01-26 21:36:03,638 | INFO     | **************************************
[2026-01-26 23:36:35] 2026-01-26 21:36:03,638 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:36:35] 2026-01-26 21:36:03,638 | INFO     | **************************************
[2026-01-26 23:36:35] 2026-01-26 21:36:03,638 | INFO     | 
[2026-01-26 23:36:35] 2026-01-26 21:36:03,639 | INFO     | architecture information:
[2026-01-26 23:36:35] 2026-01-26 21:36:03,639 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:36:35] 2026-01-26 21:36:03,645 | INFO     | cat /etc/os-release:
[2026-01-26 23:36:35] NAME="CentOS Linux"
[2026-01-26 23:36:35] VERSION="7 (Core)"
[2026-01-26 23:36:35] ID="centos"
[2026-01-26 23:36:35] ID_LIKE="rhel fedora"
[2026-01-26 23:36:35] VERSION_ID="7"
[2026-01-26 23:36:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:36:35] ANSI_COLOR="0;31"
[2026-01-26 23:36:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:36:35] HOME_URL="https://www.centos.org/"
[2026-01-26 23:36:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:36:35] 
[2026-01-26 23:36:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:36:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:36:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:36:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:36:35] 
[2026-01-26 23:36:35] 2026-01-26 21:36:03,646 | INFO     | **************************************
[2026-01-26 23:36:35] 2026-01-26 21:36:04,148 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-26 23:36:35] 2026-01-26 21:36:04,155 | INFO     | sufficient remaining disk space (68307386368 B)
[2026-01-26 23:36:35] 2026-01-26 21:36:04,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:36:35] 2026-01-26 21:36:04,155 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:36:35] 2026-01-26 21:36:04,155 | INFO     | update_server=False
[2026-01-26 23:36:35] 2026-01-26 21:36:04,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:36:35] 2026-01-26 21:36:04,155 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 23:36:35] 2026-01-26 21:36:04,156 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:36:35] 2026-01-26 21:36:04,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:36:35] 2026-01-26 21:36:04,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:36:35] 2026-01-26 21:36:04,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:36:35] 2026-01-26 21:36:04,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:36:35] 2026-01-26 21:36:04,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:36:35] 2026-01-26 21:36:04,215 | INFO     | all data control threads have been joined
[2026-01-26 23:36:35] 2026-01-26 21:36:05,160 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,161 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,220 | INFO     | [data] control thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,453 | INFO     | all payload control threads have been joined
[2026-01-26 23:36:35] 2026-01-26 21:36:05,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,550 | INFO     | [job] validate thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,557 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,607 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,659 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,716 | INFO     | all job control threads have been joined
[2026-01-26 23:36:35] 2026-01-26 21:36:05,736 | WARNING  | process 1381309 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 23:36:35] 2026-01-26 21:36:05,764 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:05,798 | INFO     | using path: /home/ek/BOINC/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:36:35] 2026-01-26 21:36:05,897 | INFO     | number of running child processes to parent process 1381309: 1
[2026-01-26 23:36:35] 2026-01-26 21:36:05,897 | INFO     | maximum number of monitored processes: 6
[2026-01-26 23:36:35] 2026-01-26 21:36:05,897 | INFO     | aborting job monitoring since job object (job id=6983448952) has expired
[2026-01-26 23:36:35] 2026-01-26 21:36:05,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:36:35] 2026-01-26 21:36:05,897 | INFO     | will abort loop
[2026-01-26 23:36:35] 2026-01-26 21:36:06,161 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:06,458 | INFO     | [payload] control thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:06,508 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:06,721 | INFO     | [job] control thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:06,902 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:08,161 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:36:35] 2026-01-26 21:36:29,375 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:36:35] 2026-01-26 21:36:30,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941421524800)>', '<ExcThread(monitor, started 139941057107712)>']
[2026-01-26 23:36:35] 2026-01-26 21:36:30,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:36:35] 2026-01-26 21:36:30,281 | INFO     | [monitor] control thread has ended
[2026-01-26 23:36:35] 2026-01-26 21:36:35,198 | INFO     | all workflow threads have been joined
[2026-01-26 23:36:35] 2026-01-26 21:36:35,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:36:35] 2026-01-26 21:36:35,198 | INFO     | traces error code: 0
[2026-01-26 23:36:35] 2026-01-26 21:36:35,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:36:35] 2026-01-26 21:36:35,249 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:36:35] 2026-01-26 21:36:35,251 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:36:35] 2026-01-26 21:36:35,253 [wrapper] pilotpid: 1376681
[2026-01-26 23:36:35] 2026-01-26 21:36:35,255 [wrapper] Pilot exit status: 0
[2026-01-26 23:36:35] 2026-01-26 21:36:35,260 [wrapper] pandaids: 6983448952
[2026-01-26 23:36:35] 2026-01-26 21:36:35,282 [wrapper] cleanup supervisor_pilot 1447085 1376682
[2026-01-26 23:36:35] 2026-01-26 21:36:35,284 [wrapper] Test setup, not cleaning
[2026-01-26 23:36:35] 2026-01-26 21:36:35,285 [wrapper] apfmon messages muted
[2026-01-26 23:36:35] 2026-01-26 21:36:35,286 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:36:35] 2026-01-26 21:36:35,288 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:36:35]  *** Error codes and diagnostics ***
[2026-01-26 23:36:35]     "exeErrorCode": 0,
[2026-01-26 23:36:35]     "exeErrorDiag": "",
[2026-01-26 23:36:35]     "pilotErrorCode": 0,
[2026-01-26 23:36:35]     "pilotErrorDiag": "",
[2026-01-26 23:36:35]  *** Listing of results directory ***
[2026-01-26 23:36:35] total 418408
[2026-01-26 23:36:35] -rw-r--r-- 1 ek ek      5111 Jan 25 22:48 queuedata.json
[2026-01-26 23:36:35] -rw-r--r-- 1 ek ek    584422 Jan 25 22:48 pilot3.tar.gz
[2026-01-26 23:36:35] -rwx------ 1 ek ek     36322 Jan 25 22:48 runpilot2-wrapper.sh
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek       100 Jan 26 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:36:35] -rwxr-xr-x 1 ek ek      7986 Jan 26 22:25 run_atlas
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek       105 Jan 26 22:25 job.xml
[2026-01-26 23:36:35] -rw-r--r-- 2 ek ek 250114722 Jan 26 22:25 EVNT.48298565._000003.pool.root.1
[2026-01-26 23:36:35] -rw-r--r-- 2 ek ek    597768 Jan 26 22:25 input.tar.gz
[2026-01-26 23:36:35] -rw-r--r-- 2 ek ek     15845 Jan 26 22:25 start_atlas.sh
[2026-01-26 23:36:35] drwxrwx--x 2 ek ek      4096 Jan 26 22:25 shared
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek         0 Jan 26 22:25 boinc_setup_complete
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek      9841 Jan 26 22:25 init_data.xml
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek         0 Jan 26 22:25 boinc_lockfile
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek      2611 Jan 26 22:25 pandaJob.out
[2026-01-26 23:36:35] -rw------- 1 ek ek        50 Jan 26 22:25 setup.sh.local
[2026-01-26 23:36:35] -rw------- 1 ek ek   1006457 Jan 26 22:25 agis_schedconf.cvmfs.json
[2026-01-26 23:36:35] -rw------- 1 ek ek   1516246 Jan 26 22:25 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:36:35] -rw------- 1 ek ek       432 Jan 26 22:25 workernode_map.json
[2026-01-26 23:36:35] drwx------ 5 ek ek      4096 Jan 26 22:25 pilot3
[2026-01-26 23:36:35] -rw------- 1 ek ek 172596279 Jan 26 23:35 HITS.48298567._000064.pool.root.1
[2026-01-26 23:36:35] -rw------- 1 ek ek        95 Jan 26 23:35 pilot_heartbeat.json
[2026-01-26 23:36:35] -rw------- 1 ek ek      1031 Jan 26 23:35 memory_monitor_summary.json
[2026-01-26 23:36:35] -rw------- 1 ek ek    262574 Jan 26 23:36 log.48298567._000064.job.log.tgz.1
[2026-01-26 23:36:35] -rw------- 1 ek ek      6327 Jan 26 23:36 heartbeat.json
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek       529 Jan 26 23:36 boinc_task_state.xml
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek      8192 Jan 26 23:36 boinc_mmap_file
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek        27 Jan 26 23:36 wrapper_checkpoint.txt
[2026-01-26 23:36:35] -rw------- 1 ek ek      5069 Jan 26 23:36 pilotlog.txt
[2026-01-26 23:36:35] -rw------- 1 ek ek    627070 Jan 26 23:36 log.48298567._000064.job.log.1
[2026-01-26 23:36:35] -rw------- 1 ek ek       357 Jan 26 23:36 output.list
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek       620 Jan 26 23:36 runtime_log
[2026-01-26 23:36:35] -rw------- 1 ek ek    911360 Jan 26 23:36 result.tar.gz
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek      9501 Jan 26 23:36 runtime_log.err
[2026-01-26 23:36:35] -rw------- 1 ek ek       664 Jan 26 23:36 DUFNDmJDM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlG8KDmbXypMn.diag
[2026-01-26 23:36:35] -rw-rw-r-- 1 ek ek     21075 Jan 26 23:36 stderr.txt
[2026-01-26 23:36:35] HITS file was successfully produced:
[2026-01-26 23:36:35] -rw------- 1 ek ek 172596279 Jan 26 23:35 shared/HITS.pool.root.1
[2026-01-26 23:36:35]  *** Contents of shared directory: ***
[2026-01-26 23:36:35] total 414308
[2026-01-26 23:36:35] -rw-r--r-- 2 ek ek 250114722 Jan 26 22:25 ATLAS.root_0
[2026-01-26 23:36:35] -rw-r--r-- 2 ek ek    597768 Jan 26 22:25 input.tar.gz
[2026-01-26 23:36:35] -rw-r--r-- 2 ek ek     15845 Jan 26 22:25 start_atlas.sh
[2026-01-26 23:36:35] -rw------- 1 ek ek 172596279 Jan 26 23:35 HITS.pool.root.1
[2026-01-26 23:36:35] -rw------- 1 ek ek    911360 Jan 26 23:36 result.tar.gz
23:36:36 (1372828): run_atlas exited; CPU time 16001.911323
23:36:36 (1372828): called boinc_finish(0)

</stderr_txt>
]]>

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