Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
18:39:23 (1040670): wrapper (7.7.26015): starting
18:39:23 (1040670): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 18:39:23] Arguments: --nthreads 4
[2026-01-26 18:39:23] Threads: 4
[2026-01-26 18:39:23] Checking for CVMFS
[2026-01-26 18:39:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:39:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:39:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:39:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:39:23] 2.13.3.0 12410 1169 46088 155553 2 50 20867062 33554432 0 130560 0 745339 99.989 47421 203 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-26 18:39:23] CVMFS is ok
[2026-01-26 18:39:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:39:23] Checking for apptainer binary...
[2026-01-26 18:39:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:39:23] Running /usr/bin/apptainer --version
[2026-01-26 18:39:23] apptainer version 1.4.5
[2026-01-26 18:39:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:39:24] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-26 18:39:24] apptainer works
[2026-01-26 18:39:24] Set ATHENA_PROC_NUMBER=4
[2026-01-26 18:39:24] Set ATHENA_CORE_NUMBER=4
[2026-01-26 18:39:24] Starting ATLAS job with PandaID=6983448957
[2026-01-26 18:39:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:57:47]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:57:47]  ddmendpoint_alt=None
[2026-01-26 19:57:47]  direct_access_lan=False
[2026-01-26 19:57:47]  direct_access_wan=False
[2026-01-26 19:57:47]  domain=
[2026-01-26 19:57:47]  filesize=273105
[2026-01-26 19:57:47]  filetype=log
[2026-01-26 19:57:47]  guid=7c6ee5f6-987b-408b-bd2b-a9dfc5155ce0
[2026-01-26 19:57:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 19:57:47]  is_altstaged=None
[2026-01-26 19:57:47]  is_tar=False
[2026-01-26 19:57:47]  lfn=log.48298567._000069.job.log.tgz.1
[2026-01-26 19:57:47]  mtime=0
[2026-01-26 19:57:47]  protocol_id=None
[2026-01-26 19:57:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 19:57:47]  replicas=None
[2026-01-26 19:57:47]  scope=mc23_13p6TeV
[2026-01-26 19:57:47]  status=None
[2026-01-26 19:57:47]  status_code=0
[2026-01-26 19:57:47]  storage_token=
[2026-01-26 19:57:47]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6983448957/log.48298567._000069.job.log.tgz.1
[2026-01-26 19:57:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/e4/log.48298567._000069.job.log.tgz.1
[2026-01-26 19:57:47]  workdir=None
[2026-01-26 19:57:47] ]
[2026-01-26 19:57:47] 2026-01-26 17:56:52,911 | INFO     | transferring file log.48298567._000069.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6983448957/log.48298567._000069.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-26 19:57:47] 2026-01-26 17:56:52,911 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6983448957/log.48298567._000069.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48298567._000069.job
[2026-01-26 19:57:47] 2026-01-26 17:56:52,923 | INFO     | adding to output.list: log.48298567._000069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/e4/log.48298567._000069.job.log.tg
[2026-01-26 19:57:47] 2026-01-26 17:56:52,924 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 19:57:47] 2026-01-26 17:56:52,924 | INFO     | summary of transferred files:
[2026-01-26 19:57:47] 2026-01-26 17:56:52,924 | INFO     |  -- lfn=log.48298567._000069.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 19:57:47] 2026-01-26 17:56:52,924 | INFO     | stage-out finished correctly
[2026-01-26 19:57:47] 2026-01-26 17:56:54,042 | INFO     | time since job start (4640s) is within the limit (349056.0s)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,177 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 19:57:47] 2026-01-26 17:56:54,317 | INFO     | job 6983448957 has state=finished
[2026-01-26 19:57:47] 2026-01-26 17:56:54,317 | INFO     | preparing for final server update for job 6983448957 in state='finished'
[2026-01-26 19:57:47] 2026-01-26 17:56:54,318 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6983448957/jobReport.json
[2026-01-26 19:57:47] 2026-01-26 17:56:54,318 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-26 19:57:47] 2026-01-26 17:56:54,319 | INFO     | this job has now completed (state=finished)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,319 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,319 | INFO     | log transfer has been attempted: DONE
[2026-01-26 19:57:47] 2026-01-26 17:56:54,319 | INFO     | job 6983448957 has finished - writing final server update
[2026-01-26 19:57:47] 2026-01-26 17:56:54,319 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,321 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6983448957/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,321 | INFO     | extracted standard info from prmon json
[2026-01-26 19:57:47] 2026-01-26 17:56:54,321 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:57:47] 2026-01-26 17:56:54,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:57:47] 2026-01-26 17:56:54,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:57:47] 2026-01-26 17:56:54,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | sum of square deviations: 101843770.0
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | sum of deviations: -3021388865.0000005
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | mean x: 1769447970.0
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | mean y: 2418096.3913043477
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | intersect: 52496452770.82308
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | chi2: 0.009679216927518162
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | current memory leak: -29.67 B/s (using 69 data points, chi2=0.01)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | could have reported an average CPU frequency of 4174 MHz (6 samples)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | ..............................
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | . Timing measurements:
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | . get job = 0 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,322 | INFO     | . initial setup = 4 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,323 | INFO     | . payload setup = 2 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,323 | INFO     | . stage-in = 0 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,323 | INFO     | . payload execution = 4620 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,323 | INFO     | . stage-out = 0 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,323 | INFO     | . log creation = 0 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,323 | INFO     | ..............................
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | 
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | job summary report
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | --------------------------------------------------
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | PanDA job id: 6983448957
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | task id: 48298567
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | errors: (none)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | pilot state: finished 
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | transexitcode: 0
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | exeerrorcode: 0
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | exeerrordiag: 
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | exitcode: 0
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | exitmsg: OK
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | cpuconsumptiontime: 17653 s
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | nevents: 400
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | neventsw: 0
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | pid: 1049345
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | pgrp: 1049345
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | corecount: 4
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | event service: False
[2026-01-26 19:57:47] 2026-01-26 17:56:54,352 | INFO     | sizes: {0: 2284097, 1: 2284359, 11: 2284387, 4627: 2310757, 4628: 2319755, 4629: 2320133}
[2026-01-26 19:57:47] 2026-01-26 17:56:54,353 | INFO     | --------------------------------------------------
[2026-01-26 19:57:47] 2026-01-26 17:56:54,353 | INFO     | 
[2026-01-26 19:57:47] 2026-01-26 17:56:54,353 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | job 6983448957 has completed (purged errors)
[2026-01-26 19:57:47] 2026-01-26 17:56:54,363 | INFO     | overall cleanup function is called
[2026-01-26 19:57:47] 2026-01-26 17:56:55,369 | INFO     | --- collectZombieJob: --- 10, [1049345]
[2026-01-26 19:57:47] 2026-01-26 17:56:55,369 | INFO     | zombie collector waiting for pid 1049345
[2026-01-26 19:57:47] 2026-01-26 17:56:55,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:57:47] 2026-01-26 17:56:55,369 | INFO     | collected zombie processes
[2026-01-26 19:57:47] 2026-01-26 17:56:55,369 | INFO     | will attempt to kill all subprocesses of pid=1049345
[2026-01-26 19:57:47] 2026-01-26 17:56:55,466 | INFO     | process IDs to be killed: [1049345] (in reverse order)
[2026-01-26 19:57:47] 2026-01-26 17:56:55,498 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:57:47] 2026-01-26 17:56:55,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:57:47] 2026-01-26 17:56:55,501 | INFO     | did not find any defunct processes belonging to 1049345
[2026-01-26 19:57:47] 2026-01-26 17:56:55,503 | INFO     | did not find any defunct processes belonging to 1049345
[2026-01-26 19:57:47] 2026-01-26 17:56:55,503 | INFO     | ready for new job
[2026-01-26 19:57:47] 2026-01-26 17:56:55,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:57:47] 2026-01-26 17:56:55,504 | INFO     | **************************************
[2026-01-26 19:57:47] 2026-01-26 17:56:55,504 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:57:47] 2026-01-26 17:56:55,504 | INFO     | **************************************
[2026-01-26 19:57:47] 2026-01-26 17:56:55,504 | INFO     | 
[2026-01-26 19:57:47] 2026-01-26 17:56:55,504 | INFO     | architecture information:
[2026-01-26 19:57:47] 2026-01-26 17:56:55,504 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:57:47] 2026-01-26 17:56:55,514 | INFO     | cat /etc/os-release:
[2026-01-26 19:57:47] NAME="CentOS Linux"
[2026-01-26 19:57:47] VERSION="7 (Core)"
[2026-01-26 19:57:47] ID="centos"
[2026-01-26 19:57:47] ID_LIKE="rhel fedora"
[2026-01-26 19:57:47] VERSION_ID="7"
[2026-01-26 19:57:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:57:47] ANSI_COLOR="0;31"
[2026-01-26 19:57:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:57:47] HOME_URL="https://www.centos.org/"
[2026-01-26 19:57:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:57:47] 
[2026-01-26 19:57:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:57:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:57:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:57:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:57:47] 
[2026-01-26 19:57:47] 2026-01-26 17:56:55,514 | INFO     | **************************************
[2026-01-26 19:57:47] 2026-01-26 17:56:56,017 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | INFO     | sufficient remaining disk space (67644686336 B)
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | INFO     | update_server=False
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:57:47] 2026-01-26 17:56:56,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:57:47] 2026-01-26 17:56:56,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:57:47] 2026-01-26 17:56:56,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:57:47] 2026-01-26 17:56:56,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:57:47] 2026-01-26 17:56:56,025 | INFO     | aborting loop
[2026-01-26 19:57:47] 2026-01-26 17:56:56,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:57:47] 2026-01-26 17:56:56,332 | INFO     | all job control threads have been joined
[2026-01-26 19:57:47] 2026-01-26 17:56:56,360 | INFO     | all data control threads have been joined
[2026-01-26 19:57:47] 2026-01-26 17:56:57,029 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,030 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,030 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,094 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,279 | INFO     | all payload control threads have been joined
[2026-01-26 19:57:47] 2026-01-26 17:56:57,337 | INFO     | [job] control thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,365 | INFO     | [data] control thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,631 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,687 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:57,960 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:58,030 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:58,181 | INFO     | [job] validate thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:58,229 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:58,280 | INFO     | [payload] control thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:58,304 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:56:58,426 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:57:00,030 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:57:47] 2026-01-26 17:57:41,136 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:57:47] 2026-01-26 17:57:42,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284959795008)>', '<ExcThread(monitor, started 140284604167936)>']
[2026-01-26 19:57:47] 2026-01-26 17:57:43,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:57:47] 2026-01-26 17:57:43,248 | INFO     | [monitor] control thread has ended
[2026-01-26 19:57:47] 2026-01-26 17:57:47,744 | INFO     | all workflow threads have been joined
[2026-01-26 19:57:47] 2026-01-26 17:57:47,744 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:57:47] 2026-01-26 17:57:47,744 | INFO     | traces error code: 0
[2026-01-26 19:57:47] 2026-01-26 17:57:47,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:57:47] 2026-01-26 17:57:47,790 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:57:47] 2026-01-26 17:57:47,792 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:57:47] 2026-01-26 17:57:47,793 [wrapper] pilotpid: 1044520
[2026-01-26 19:57:47] 2026-01-26 17:57:47,794 [wrapper] Pilot exit status: 0
[2026-01-26 19:57:47] 2026-01-26 17:57:47,800 [wrapper] pandaids: 6983448957
[2026-01-26 19:57:47] 2026-01-26 17:57:47,827 [wrapper] cleanup supervisor_pilot 1102852 1044521
[2026-01-26 19:57:47] 2026-01-26 17:57:47,829 [wrapper] Test setup, not cleaning
[2026-01-26 19:57:47] 2026-01-26 17:57:47,830 [wrapper] apfmon messages muted
[2026-01-26 19:57:47] 2026-01-26 17:57:47,831 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:57:47] 2026-01-26 17:57:47,833 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:57:47]  *** Error codes and diagnostics ***
[2026-01-26 19:57:47]     "exeErrorCode": 0,
[2026-01-26 19:57:47]     "exeErrorDiag": "",
[2026-01-26 19:57:47]     "pilotErrorCode": 0,
[2026-01-26 19:57:47]     "pilotErrorDiag": "",
[2026-01-26 19:57:47]  *** Listing of results directory ***
[2026-01-26 19:57:47] total 420360
[2026-01-26 19:57:47] -rw-r--r-- 1 ek ek      5111 Jan 25 22:48 queuedata.json
[2026-01-26 19:57:47] -rw-r--r-- 1 ek ek    584422 Jan 25 22:48 pilot3.tar.gz
[2026-01-26 19:57:47] -rwx------ 1 ek ek     36322 Jan 25 22:48 runpilot2-wrapper.sh
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek       100 Jan 26 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:57:47] -rwxr-xr-x 1 ek ek      7986 Jan 26 18:39 run_atlas
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek       105 Jan 26 18:39 job.xml
[2026-01-26 19:57:47] -rw-r--r-- 2 ek ek 250114722 Jan 26 18:39 EVNT.48298565._000003.pool.root.1
[2026-01-26 19:57:47] -rw-r--r-- 2 ek ek    597768 Jan 26 18:39 input.tar.gz
[2026-01-26 19:57:47] -rw-r--r-- 2 ek ek     15845 Jan 26 18:39 start_atlas.sh
[2026-01-26 19:57:47] drwxrwx--x 2 ek ek      4096 Jan 26 18:39 shared
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek         0 Jan 26 18:39 boinc_setup_complete
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek      9841 Jan 26 18:39 init_data.xml
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek         0 Jan 26 18:39 boinc_lockfile
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek      2611 Jan 26 18:39 pandaJob.out
[2026-01-26 19:57:47] -rw------- 1 ek ek        50 Jan 26 18:39 setup.sh.local
[2026-01-26 19:57:47] -rw------- 1 ek ek   1006276 Jan 26 18:39 agis_schedconf.cvmfs.json
[2026-01-26 19:57:47] -rw------- 1 ek ek   1516246 Jan 26 18:39 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:57:47] -rw------- 1 ek ek       432 Jan 26 18:39 workernode_map.json
[2026-01-26 19:57:47] drwx------ 5 ek ek      4096 Jan 26 18:39 pilot3
[2026-01-26 19:57:47] -rw------- 1 ek ek        95 Jan 26 19:56 pilot_heartbeat.json
[2026-01-26 19:57:47] -rw------- 1 ek ek 174469825 Jan 26 19:56 HITS.48298567._000069.pool.root.1
[2026-01-26 19:57:47] -rw------- 1 ek ek      1040 Jan 26 19:56 memory_monitor_summary.json
[2026-01-26 19:57:47] -rw------- 1 ek ek    273105 Jan 26 19:56 log.48298567._000069.job.log.tgz.1
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek       529 Jan 26 19:56 boinc_task_state.xml
[2026-01-26 19:57:47] -rw------- 1 ek ek      6340 Jan 26 19:56 heartbeat.json
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek      8192 Jan 26 19:57 boinc_mmap_file
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek        27 Jan 26 19:57 wrapper_checkpoint.txt
[2026-01-26 19:57:47] -rw------- 1 ek ek      4548 Jan 26 19:57 pilotlog.txt
[2026-01-26 19:57:47] -rw------- 1 ek ek    680852 Jan 26 19:57 log.48298567._000069.job.log.1
[2026-01-26 19:57:47] -rw------- 1 ek ek       357 Jan 26 19:57 output.list
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek       620 Jan 26 19:57 runtime_log
[2026-01-26 19:57:47] -rw------- 1 ek ek    972800 Jan 26 19:57 result.tar.gz
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek      9501 Jan 26 19:57 runtime_log.err
[2026-01-26 19:57:47] -rw------- 1 ek ek       666 Jan 26 19:57 bYNNDmJDM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoG8KDmprcWan.diag
[2026-01-26 19:57:47] -rw-rw-r-- 1 ek ek     20657 Jan 26 19:57 stderr.txt
[2026-01-26 19:57:47] HITS file was successfully produced:
[2026-01-26 19:57:47] -rw------- 1 ek ek 174469825 Jan 26 19:56 shared/HITS.pool.root.1
[2026-01-26 19:57:47]  *** Contents of shared directory: ***
[2026-01-26 19:57:47] total 416200
[2026-01-26 19:57:47] -rw-r--r-- 2 ek ek 250114722 Jan 26 18:39 ATLAS.root_0
[2026-01-26 19:57:47] -rw-r--r-- 2 ek ek    597768 Jan 26 18:39 input.tar.gz
[2026-01-26 19:57:47] -rw-r--r-- 2 ek ek     15845 Jan 26 18:39 start_atlas.sh
[2026-01-26 19:57:47] -rw------- 1 ek ek 174469825 Jan 26 19:56 HITS.pool.root.1
[2026-01-26 19:57:47] -rw------- 1 ek ek    972800 Jan 26 19:57 result.tar.gz
19:57:49 (1040670): run_atlas exited; CPU time 17698.831153
19:57:49 (1040670): called boinc_finish(0)

</stderr_txt>
]]>

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