Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:18:23 (460136): wrapper (7.7.26015): starting
10:18:23 (460136): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 10:18:23] Arguments: --nthreads 12
[2026-01-27 10:18:23] Threads: 12
[2026-01-27 10:18:23] Checking for CVMFS
[2026-01-27 10:18:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 10:18:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 10:18:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 10:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 10:18:23] 2.13.3.0 437865 13 45404 155564 2 186 2302056 4096000 1732 130560 0 68021 99.975 2902 1525 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 10:18:23] CVMFS is ok
[2026-01-27 10:18:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 10:18:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 10:18:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 10:18:23] Further information can be found at the LHC@home message board.
[2026-01-27 10:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 10:18:23] Checking for apptainer binary...
[2026-01-27 10:18:23] apptainer is not installed, using version from CVMFS
[2026-01-27 10:18:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 10:18:23] dc
[2026-01-27 10:18:23] apptainer works
[2026-01-27 10:18:23] Set ATHENA_PROC_NUMBER=12
[2026-01-27 10:18:23] Set ATHENA_CORE_NUMBER=12
[2026-01-27 10:18:23] Starting ATLAS job with PandaID=6982920087
[2026-01-27 10:18:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 10:54:14]  *** The last 200 lines of the pilot log: ***
[2026-01-27 10:54:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 10:54:14]  is_altstaged=None
[2026-01-27 10:54:14]  is_tar=False
[2026-01-27 10:54:14]  lfn=log.48310724._008091.job.log.tgz.1
[2026-01-27 10:54:14]  mtime=0
[2026-01-27 10:54:14]  protocol_id=None
[2026-01-27 10:54:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 10:54:14]  replicas=None
[2026-01-27 10:54:14]  scope=mc23_13p6TeV
[2026-01-27 10:54:14]  status=None
[2026-01-27 10:54:14]  status_code=0
[2026-01-27 10:54:14]  storage_token=
[2026-01-27 10:54:14]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6982920087/log.48310724._008091.job.log.tgz.1
[2026-01-27 10:54:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/a7/log.48310724._008091.job.log.tgz.1
[2026-01-27 10:54:14]  workdir=None
[2026-01-27 10:54:14] ]
[2026-01-27 10:54:14] 2026-01-26 23:53:40,302 | INFO     | transferring file log.48310724._008091.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6982920087/log.48310724._008091.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 10:54:14] 2026-01-26 23:53:40,302 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6982920087/log.48310724._008091.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.483107
[2026-01-27 10:54:14] 2026-01-26 23:53:40,312 | INFO     | adding to output.list: log.48310724._008091.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/a7/log.48310724._008091.job.log.tg
[2026-01-27 10:54:14] 2026-01-26 23:53:40,312 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 10:54:14] 2026-01-26 23:53:40,312 | INFO     | summary of transferred files:
[2026-01-27 10:54:14] 2026-01-26 23:53:40,312 | INFO     |  -- lfn=log.48310724._008091.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 10:54:14] 2026-01-26 23:53:40,312 | INFO     | stage-out finished correctly
[2026-01-27 10:54:14] 2026-01-26 23:53:41,631 | INFO     | time since job start (2099s) is within the limit (349056.0s)
[2026-01-27 10:54:14] 2026-01-26 23:53:42,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 10:54:14] 2026-01-26 23:53:43,184 | WARNING  | process 478719 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 10:54:14] 2026-01-26 23:53:43,184 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6982920087/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,221 | INFO     | number of running child processes to parent process 478719: 1
[2026-01-27 10:54:14] 2026-01-26 23:53:43,221 | INFO     | maximum number of monitored processes: 6
[2026-01-27 10:54:14] 2026-01-26 23:53:43,294 | INFO     | job 6982920087 has state=finished
[2026-01-27 10:54:14] 2026-01-26 23:53:43,294 | INFO     | preparing for final server update for job 6982920087 in state='finished'
[2026-01-27 10:54:14] 2026-01-26 23:53:43,294 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-6982920087/jobReport.json
[2026-01-27 10:54:14] 2026-01-26 23:53:43,295 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-01-27 10:54:14] 2026-01-26 23:53:43,295 | INFO     | this job has now completed (state=finished)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,295 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,295 | INFO     | log transfer has been attempted: DONE
[2026-01-27 10:54:14] 2026-01-26 23:53:43,295 | INFO     | job 6982920087 has finished - writing final server update
[2026-01-27 10:54:14] 2026-01-26 23:53:43,295 | INFO     | total number of processed events: 400 (read)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,297 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6982920087/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,297 | INFO     | extracted standard info from prmon json
[2026-01-27 10:54:14] 2026-01-26 23:53:43,297 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 10:54:14] 2026-01-26 23:53:43,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 10:54:14] 2026-01-26 23:53:43,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 10:54:14] 2026-01-26 23:53:43,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | fitting pss+swap vs Time
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | sum of square deviations: 6798267.0
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | sum of deviations: 40224620.0
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | mean x: 1769470666.5
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | mean y: 2687135.0714285714
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | intersect: -10467081875.340965
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | chi2: 0.004279578248652962
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | current memory leak: 5.92 B/s (using 28 data points, chi2=0.00)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | could have reported an average CPU frequency of 3393 MHz (5 samples)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | ..............................
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . Timing measurements:
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . get job = 0 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . initial setup = 7 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . payload setup = 2 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . stage-in = 0 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . payload execution = 2080 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,298 | INFO     | . stage-out = 0 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,299 | INFO     | . log creation = 0 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,299 | INFO     | ..............................
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | 
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | job summary report
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | --------------------------------------------------
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | PanDA job id: 6982920087
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | task id: 48310724
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | errors: (none)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | pilot state: finished 
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | transexitcode: 0
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | exeerrorcode: 0
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | exeerrordiag: 
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | exitcode: 0
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | exitmsg: OK
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | cpuconsumptiontime: 21727 s
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | nevents: 400
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | neventsw: 0
[2026-01-27 10:54:14] 2026-01-26 23:53:43,327 | INFO     | pid: 478719
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | pgrp: 478719
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | corecount: 12
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | event service: False
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | sizes: {0: 2284260, 11: 2284260, 2087: 2318295, 2090: 2318521}
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | --------------------------------------------------
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | 
[2026-01-27 10:54:14] 2026-01-26 23:53:43,328 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 10:54:14] 2026-01-26 23:53:43,340 | INFO     | job 6982920087 has completed (purged errors)
[2026-01-27 10:54:14] 2026-01-26 23:53:43,341 | INFO     | overall cleanup function is called
[2026-01-27 10:54:14] 2026-01-26 23:53:44,347 | INFO     | --- collectZombieJob: --- 10, [478719]
[2026-01-27 10:54:14] 2026-01-26 23:53:44,347 | INFO     | zombie collector waiting for pid 478719
[2026-01-27 10:54:14] 2026-01-26 23:53:44,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 10:54:14] 2026-01-26 23:53:44,347 | INFO     | collected zombie processes
[2026-01-27 10:54:14] 2026-01-26 23:53:44,348 | INFO     | will attempt to kill all subprocesses of pid=478719
[2026-01-27 10:54:14] 2026-01-26 23:53:44,386 | INFO     | process IDs to be killed: [478719] (in reverse order)
[2026-01-27 10:54:14] 2026-01-26 23:53:44,409 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 10:54:14] 2026-01-26 23:53:44,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 10:54:14] 2026-01-26 23:53:44,411 | INFO     | did not find any defunct processes belonging to 478719
[2026-01-27 10:54:14] 2026-01-26 23:53:44,411 | INFO     | did not find any defunct processes belonging to 478719
[2026-01-27 10:54:14] 2026-01-26 23:53:44,412 | INFO     | ready for new job
[2026-01-27 10:54:14] 2026-01-26 23:53:44,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 10:54:14] 2026-01-26 23:53:44,412 | INFO     | **************************************
[2026-01-27 10:54:14] 2026-01-26 23:53:44,412 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 10:54:14] 2026-01-26 23:53:44,412 | INFO     | **************************************
[2026-01-27 10:54:14] 2026-01-26 23:53:44,412 | INFO     | 
[2026-01-27 10:54:14] 2026-01-26 23:53:44,413 | INFO     | pilot is running in a VM
[2026-01-27 10:54:14] 2026-01-26 23:53:44,413 | INFO     | architecture information:
[2026-01-27 10:54:14] 2026-01-26 23:53:44,413 | INFO     | executing command: cat /etc/os-release
[2026-01-27 10:54:14] 2026-01-26 23:53:44,420 | INFO     | cat /etc/os-release:
[2026-01-27 10:54:14] NAME="CentOS Linux"
[2026-01-27 10:54:14] VERSION="7 (Core)"
[2026-01-27 10:54:14] ID="centos"
[2026-01-27 10:54:14] ID_LIKE="rhel fedora"
[2026-01-27 10:54:14] VERSION_ID="7"
[2026-01-27 10:54:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 10:54:14] ANSI_COLOR="0;31"
[2026-01-27 10:54:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 10:54:14] HOME_URL="https://www.centos.org/"
[2026-01-27 10:54:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 10:54:14] 
[2026-01-27 10:54:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 10:54:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 10:54:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 10:54:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 10:54:14] 
[2026-01-27 10:54:14] 2026-01-26 23:53:44,420 | INFO     | **************************************
[2026-01-27 10:54:14] 2026-01-26 23:53:44,923 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-27 10:54:14] 2026-01-26 23:53:44,931 | INFO     | sufficient remaining disk space (176526721024 B)
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | INFO     | update_server=False
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | INFO     | [monitor] cgroup control has ended
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 10:54:14] 2026-01-26 23:53:44,932 | INFO     | aborting loop
[2026-01-27 10:54:14] 2026-01-26 23:53:45,334 | INFO     | all payload control threads have been joined
[2026-01-27 10:54:14] 2026-01-26 23:53:45,650 | INFO     | all data control threads have been joined
[2026-01-27 10:54:14] 2026-01-26 23:53:45,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 10:54:14] 2026-01-26 23:53:45,933 | INFO     | [job] retrieve thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:45,937 | INFO     | [job] queue monitor thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:45,937 | INFO     | [job] job monitor thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:45,939 | INFO     | [payload] failed_post thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,339 | INFO     | [payload] control thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,436 | INFO     | all job control threads have been joined
[2026-01-27 10:54:14] 2026-01-26 23:53:46,468 | INFO     | [job] validate thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,484 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,535 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,624 | INFO     | job.realtimelogging is not enabled
[2026-01-27 10:54:14] 2026-01-26 23:53:46,655 | INFO     | [data] control thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,689 | INFO     | [data] copytool_in thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:46,867 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:47,295 | INFO     | [payload] validate_post thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:47,441 | INFO     | [job] control thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:47,629 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:47,850 | INFO     | [data] copytool_out thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:48,938 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 10:54:14] 2026-01-26 23:53:49,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134133261080384)>', '<ExcThread(monitor, started 134132499740416)>']
[2026-01-27 10:54:14] 2026-01-26 23:53:54,323 | INFO     | all workflow threads have been joined
[2026-01-27 10:54:14] 2026-01-26 23:53:54,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 10:54:14] 2026-01-26 23:53:54,324 | INFO     | traces error code: 0
[2026-01-27 10:54:14] 2026-01-26 23:53:54,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 10:54:14] 2026-01-26 23:54:14,766 | INFO     | PID=468090 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 10:54:14] 2026-01-26 23:54:14,766 | INFO     | .. there are 2 such processes running
[2026-01-27 10:54:14] 2026-01-26 23:54:14,766 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 10:54:14] 2026-01-26 23:54:14,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 10:54:14] 2026-01-26 23:54:14,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 10:54:14] 2026-01-26 23:54:14,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 10:54:14] 2026-01-26 23:54:14,767 | INFO     | [monitor] control thread has ended
[2026-01-27 10:54:14] 2026-01-26 23:54:14,807 [wrapper] ==== pilot stdout END ====
[2026-01-27 10:54:14] 2026-01-26 23:54:14,809 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 10:54:14] 2026-01-26 23:54:14,810 [wrapper] pilotpid: 468090
[2026-01-27 10:54:14] 2026-01-26 23:54:14,812 [wrapper] Pilot exit status: 0
[2026-01-27 10:54:14] 2026-01-26 23:54:14,817 [wrapper] pandaids: 6982920087
[2026-01-27 10:54:14] 2026-01-26 23:54:14,829 [wrapper] cleanup supervisor_pilot  491451 468091
[2026-01-27 10:54:14] 2026-01-26 23:54:14,830 [wrapper] Test setup, not cleaning
[2026-01-27 10:54:14] 2026-01-26 23:54:14,832 [wrapper] apfmon messages muted
[2026-01-27 10:54:14] 2026-01-26 23:54:14,833 [wrapper] ==== wrapper stdout END ====
[2026-01-27 10:54:14] 2026-01-26 23:54:14,834 [wrapper] ==== wrapper stderr END ====
[2026-01-27 10:54:14]  *** Error codes and diagnostics ***
[2026-01-27 10:54:14]     "exeErrorCode": 0,
[2026-01-27 10:54:14]     "exeErrorDiag": "",
[2026-01-27 10:54:14]     "pilotErrorCode": 0,
[2026-01-27 10:54:14]     "pilotErrorDiag": "",
[2026-01-27 10:54:14]  *** Listing of results directory ***
[2026-01-27 10:54:14] total 665556
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc    584422 Jan 25 22:26 pilot3.tar.gz
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc      5111 Jan 25 22:28 queuedata.json
[2026-01-27 10:54:14] -rwx------ 1 boinc boinc     36322 Jan 25 22:28 runpilot2-wrapper.sh
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc       100 Jan 27 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 10:54:14] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 10:18 run_atlas
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc       105 Jan 27 10:18 job.xml
[2026-01-27 10:54:14] -rw-r--r-- 2 boinc boinc 497720620 Jan 27 10:18 EVNT.48310721._000162.pool.root.1
[2026-01-27 10:54:14] -rw-r--r-- 2 boinc boinc    597754 Jan 27 10:18 input.tar.gz
[2026-01-27 10:54:14] drwxrwx--x 2 boinc boinc      4096 Jan 27 10:18 shared
[2026-01-27 10:54:14] -rw-r--r-- 2 boinc boinc     15845 Jan 27 10:18 start_atlas.sh
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc         0 Jan 27 10:18 boinc_setup_complete
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc      6288 Jan 27 10:18 init_data.xml
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc         0 Jan 27 10:18 boinc_lockfile
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc      2534 Jan 27 10:18 pandaJob.out
[2026-01-27 10:54:14] -rw------- 1 boinc boinc   1006433 Jan 27 10:18 agis_schedconf.cvmfs.json
[2026-01-27 10:54:14] -rw------- 1 boinc boinc   1516246 Jan 27 10:18 agis_ddmendpoints.agis.ALL.json
[2026-01-27 10:54:14] -rw------- 1 boinc boinc       416 Jan 27 10:18 workernode_map.json
[2026-01-27 10:54:14] drwx------ 5 boinc boinc      4096 Jan 27 10:18 pilot3
[2026-01-27 10:54:14] -rw------- 1 boinc boinc 178410356 Jan 27 10:53 HITS.48310724._008091.pool.root.1
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc       530 Jan 27 10:53 boinc_task_state.xml
[2026-01-27 10:54:14] -rw------- 1 boinc boinc      1013 Jan 27 10:53 memory_monitor_summary.json
[2026-01-27 10:54:14] -rw------- 1 boinc boinc    381289 Jan 27 10:53 log.48310724._008091.job.log.tgz.1
[2026-01-27 10:54:14] -rw------- 1 boinc boinc      6252 Jan 27 10:53 heartbeat.json
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc        27 Jan 27 10:53 wrapper_checkpoint.txt
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc      8192 Jan 27 10:53 boinc_mmap_file
[2026-01-27 10:54:14] -rw------- 1 boinc boinc       821 Jan 27 10:54 pilotlog.txt
[2026-01-27 10:54:14] -rw------- 1 boinc boinc        95 Jan 27 10:54 pilot_heartbeat.json
[2026-01-27 10:54:14] -rw------- 1 boinc boinc    345135 Jan 27 10:54 log.48310724._008091.job.log.1
[2026-01-27 10:54:14] -rw------- 1 boinc boinc       357 Jan 27 10:54 output.list
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc       620 Jan 27 10:54 runtime_log
[2026-01-27 10:54:14] -rw------- 1 boinc boinc    747520 Jan 27 10:54 result.tar.gz
[2026-01-27 10:54:14] -rw------- 1 boinc boinc       636 Jan 27 10:54 VT8KDm1SD48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNP7KDm0hK7on.diag
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc      8856 Jan 27 10:54 runtime_log.err
[2026-01-27 10:54:14] -rw-r--r-- 1 boinc boinc     21473 Jan 27 10:54 stderr.txt
[2026-01-27 10:54:14] HITS file was successfully produced:
[2026-01-27 10:54:14] -rw------- 1 boinc boinc 178410356 Jan 27 10:53 shared/HITS.pool.root.1
[2026-01-27 10:54:14]  *** Contents of shared directory: ***
[2026-01-27 10:54:14] total 661628
[2026-01-27 10:54:14] -rw-r--r-- 2 boinc boinc 497720620 Jan 27 10:18 ATLAS.root_0
[2026-01-27 10:54:14] -rw-r--r-- 2 boinc boinc    597754 Jan 27 10:18 input.tar.gz
[2026-01-27 10:54:14] -rw-r--r-- 2 boinc boinc     15845 Jan 27 10:18 start_atlas.sh
[2026-01-27 10:54:14] -rw------- 1 boinc boinc 178410356 Jan 27 10:53 HITS.pool.root.1
[2026-01-27 10:54:14] -rw------- 1 boinc boinc    747520 Jan 27 10:54 result.tar.gz
10:54:15 (460136): run_atlas exited; CPU time 21733.243026
10:54:15 (460136): called boinc_finish(0)

</stderr_txt>
]]>

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