Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:17:20 (3458731): wrapper (7.7.26015): starting
19:17:20 (3458731): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 19:17:20] Arguments: --nthreads 8
[2026-01-25 19:17:20] Threads: 8
[2026-01-25 19:17:20] Checking for CVMFS
[2026-01-25 19:17:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 19:17:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 19:17:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 19:17:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 19:17:23] 2.13.3.0 9435 117025 356732 155525 2 735 30138170 32935937 21938 16776704 0 551453113 99.711 404351928 32455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-25 19:17:23] CVMFS is ok
[2026-01-25 19:17:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 19:17:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 19:17:23] Further information can be found at the LHC@home message board.
[2026-01-25 19:17:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 19:17:23] Checking for apptainer binary...
[2026-01-25 19:17:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 19:17:23] Running /usr/bin/apptainer --version
[2026-01-25 19:17:23] apptainer version 1.4.5-2.el9
[2026-01-25 19:17:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 19:17:25] c-8-17.aglt2.org
[2026-01-25 19:17:25] apptainer works
[2026-01-25 19:17:26] Set ATHENA_PROC_NUMBER=8
[2026-01-25 19:17:26] Set ATHENA_CORE_NUMBER=8
[2026-01-25 19:17:26] Starting ATLAS job with PandaID=6983015969
[2026-01-25 19:17:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 07:31:05]  *** The last 200 lines of the pilot log: ***
[2026-01-26 07:31:05] 2026-01-26 12:30:03,405 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983015969/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,406 | INFO     | extracted standard info from prmon json
[2026-01-26 07:31:05] 2026-01-26 12:30:03,406 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 07:31:05] 2026-01-26 12:30:03,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 07:31:05] 2026-01-26 12:30:03,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 07:31:05] 2026-01-26 12:30:03,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 07:31:05] 2026-01-26 12:30:03,552 | INFO     | fitting pss+swap vs Time
[2026-01-26 07:31:05] 2026-01-26 12:30:03,575 | INFO     | sum of square deviations: 114298753751.81583
[2026-01-26 07:31:05] 2026-01-26 12:30:03,819 | INFO     | sum of deviations: 42359653122.51909
[2026-01-26 07:31:05] 2026-01-26 12:30:03,820 | INFO     | mean x: 1769408740.1548116
[2026-01-26 07:31:05] 2026-01-26 12:30:03,820 | INFO     | mean y: 2499229.8061366808
[2026-01-26 07:31:05] 2026-01-26 12:30:03,820 | INFO     | intersect: -653251931.1177907
[2026-01-26 07:31:05] 2026-01-26 12:30:03,821 | INFO     | chi2: 6.404447118299648
[2026-01-26 07:31:05] 2026-01-26 12:30:03,822 | INFO     | sum of square deviations: 111924269634.69516
[2026-01-26 07:31:05] 2026-01-26 12:30:03,835 | INFO     | sum of deviations: 176607978908.62778
[2026-01-26 07:31:05] 2026-01-26 12:30:03,836 | INFO     | mean x: 1769408587.6558988
[2026-01-26 07:31:05] 2026-01-26 12:30:03,836 | INFO     | mean y: 2507827.386235955
[2026-01-26 07:31:05] 2026-01-26 12:30:03,836 | INFO     | intersect: -2789484253.9506006
[2026-01-26 07:31:05] 2026-01-26 12:30:03,837 | INFO     | chi2: 4.350036910096195
[2026-01-26 07:31:05] 2026-01-26 12:30:03,837 | INFO     | current chi2=4.350036910096195 (change=32.07786980289548 %)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,838 | INFO     | sum of square deviations: 109582640239.40654
[2026-01-26 07:31:05] 2026-01-26 12:30:03,871 | INFO     | sum of deviations: 175124746231.72232
[2026-01-26 07:31:05] 2026-01-26 12:30:03,872 | INFO     | mean x: 1769408435.1485147
[2026-01-26 07:31:05] 2026-01-26 12:30:03,872 | INFO     | mean y: 2507730.783592645
[2026-01-26 07:31:05] 2026-01-26 12:30:03,872 | INFO     | intersect: -2825195658.263084
[2026-01-26 07:31:05] 2026-01-26 12:30:03,873 | INFO     | chi2: 4.350659220433739
[2026-01-26 07:31:05] 2026-01-26 12:30:03,873 | INFO     | current chi2=4.350659220433739 (change=-0.014305863384737256 %)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,873 | INFO     | right removable region: 706
[2026-01-26 07:31:05] 2026-01-26 12:30:03,874 | INFO     | sum of square deviations: 111924112868.06592
[2026-01-26 07:31:05] 2026-01-26 12:30:03,889 | INFO     | sum of deviations: -167359934400.4592
[2026-01-26 07:31:05] 2026-01-26 12:30:03,889 | INFO     | mean x: 1769408892.6587079
[2026-01-26 07:31:05] 2026-01-26 12:30:03,890 | INFO     | mean y: 2512687.566011236
[2026-01-26 07:31:05] 2026-01-26 12:30:03,890 | INFO     | intersect: 2648306776.2090983
[2026-01-26 07:31:05] 2026-01-26 12:30:03,891 | INFO     | chi2: 3.255105577045187
[2026-01-26 07:31:05] 2026-01-26 12:30:03,891 | INFO     | current chi2=3.255105577045187 (change=49.174292223535396 %)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,892 | INFO     | sum of square deviations: 109582502507.63806
[2026-01-26 07:31:05] 2026-01-26 12:30:03,903 | INFO     | sum of deviations: -247736270747.71698
[2026-01-26 07:31:05] 2026-01-26 12:30:03,904 | INFO     | mean x: 1769409045.165488
[2026-01-26 07:31:05] 2026-01-26 12:30:03,904 | INFO     | mean y: 2517913.3394625178
[2026-01-26 07:31:05] 2026-01-26 12:30:03,904 | INFO     | intersect: 4002671115.2251673
[2026-01-26 07:31:05] 2026-01-26 12:30:03,905 | INFO     | chi2: 2.7046641224646537
[2026-01-26 07:31:05] 2026-01-26 12:30:03,905 | INFO     | current chi2=2.7046641224646537 (change=16.910095281155062 %)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,905 | INFO     | left removable region: 20
[2026-01-26 07:31:05] 2026-01-26 12:30:03,906 | INFO     | sum of square deviations: 100104544736.55536
[2026-01-26 07:31:05] 2026-01-26 12:30:03,921 | INFO     | sum of deviations: -162211027495.31354
[2026-01-26 07:31:05] 2026-01-26 12:30:03,921 | INFO     | mean x: 1769409014.6661808
[2026-01-26 07:31:05] 2026-01-26 12:30:03,921 | INFO     | mean y: 2530201.059766764
[2026-01-26 07:31:05] 2026-01-26 12:30:03,921 | INFO     | intersect: 2869709259.5512114
[2026-01-26 07:31:05] 2026-01-26 12:30:03,922 | INFO     | chi2: 0.4800050258397004
[2026-01-26 07:31:05] 2026-01-26 12:30:03,923 | INFO     | current memory leak: -1.62 B/s (using 686 data points, chi2=0.48)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | could have reported an average CPU frequency of 2600 MHz (28 samples)
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | ..............................
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | . Timing measurements:
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | . get job = 0 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | . initial setup = 48 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | . payload setup = 65 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | . stage-in = 0 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,924 | INFO     | . payload execution = 43725 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,925 | INFO     | . stage-out = 9 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,925 | INFO     | . log creation = 1 s
[2026-01-26 07:31:05] 2026-01-26 12:30:03,925 | INFO     | ..............................
[2026-01-26 07:31:05] 2026-01-26 12:30:04,451 | INFO     | PID=3464455 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 07:31:05] 2026-01-26 12:30:04,531 | INFO     | .. there are 29 such processes running
[2026-01-26 07:31:05] 2026-01-26 12:30:04,933 | INFO     | 
[2026-01-26 07:31:05] 2026-01-26 12:30:04,933 | INFO     | job summary report
[2026-01-26 07:31:05] 2026-01-26 12:30:04,933 | INFO     | --------------------------------------------------
[2026-01-26 07:31:05] 2026-01-26 12:30:04,933 | INFO     | PanDA job id: 6983015969
[2026-01-26 07:31:05] 2026-01-26 12:30:04,933 | INFO     | task id: 48317931
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | errors: (none)
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | pilot state: finished 
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | transexitcode: 0
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | exeerrorcode: 0
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | exeerrordiag: 
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | exitcode: 0
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | exitmsg: OK
[2026-01-26 07:31:05] 2026-01-26 12:30:04,934 | INFO     | cpuconsumptiontime: 53455 s
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | nevents: 400
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | neventsw: 0
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | pid: 3474135
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | pgrp: 3474135
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | corecount: 8
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | event service: False
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | sizes: {0: 2283086, 2: 2283687, 4: 2283771, 6: 2283827, 7: 2283827, 8: 2284416, 20: 2284416, 43796: 2328754, 43807: 2337808, 43811: 2337946}
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | --------------------------------------------------
[2026-01-26 07:31:05] 2026-01-26 12:30:04,935 | INFO     | 
[2026-01-26 07:31:05] 2026-01-26 12:30:04,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 07:31:05] 2026-01-26 12:30:05,127 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,127 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | job 6983015969 has completed (purged errors)
[2026-01-26 07:31:05] 2026-01-26 12:30:05,129 | INFO     | overall cleanup function is called
[2026-01-26 07:31:05] 2026-01-26 12:30:06,179 | INFO     | --- collectZombieJob: --- 10, [3474135]
[2026-01-26 07:31:05] 2026-01-26 12:30:06,179 | INFO     | zombie collector waiting for pid 3474135
[2026-01-26 07:31:05] 2026-01-26 12:30:06,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 07:31:05] 2026-01-26 12:30:06,179 | INFO     | collected zombie processes
[2026-01-26 07:31:05] 2026-01-26 12:30:06,179 | INFO     | will attempt to kill all subprocesses of pid=3474135
[2026-01-26 07:31:05] 2026-01-26 12:30:10,531 | INFO     | process IDs to be killed: [3474135] (in reverse order)
[2026-01-26 07:31:05] 2026-01-26 12:30:11,180 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 07:31:05] 2026-01-26 12:30:11,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 07:31:05] 2026-01-26 12:30:11,237 | INFO     | did not find any defunct processes belonging to 3474135
[2026-01-26 07:31:05] 2026-01-26 12:30:11,417 | INFO     | did not find any defunct processes belonging to 3474135
[2026-01-26 07:31:05] 2026-01-26 12:30:11,483 | INFO     | ready for new job
[2026-01-26 07:31:05] 2026-01-26 12:30:11,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 07:31:05] 2026-01-26 12:30:11,525 | INFO     | **************************************
[2026-01-26 07:31:05] 2026-01-26 12:30:11,525 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 07:31:05] 2026-01-26 12:30:11,525 | INFO     | **************************************
[2026-01-26 07:31:05] 2026-01-26 12:30:11,525 | INFO     | 
[2026-01-26 07:31:05] 2026-01-26 12:30:11,527 | INFO     | architecture information:
[2026-01-26 07:31:05] 2026-01-26 12:30:11,564 | INFO     | executing command: cat /etc/os-release
[2026-01-26 07:31:05] 2026-01-26 12:30:11,733 | INFO     | cat /etc/os-release:
[2026-01-26 07:31:05] NAME="CentOS Linux"
[2026-01-26 07:31:05] VERSION="7 (Core)"
[2026-01-26 07:31:05] ID="centos"
[2026-01-26 07:31:05] ID_LIKE="rhel fedora"
[2026-01-26 07:31:05] VERSION_ID="7"
[2026-01-26 07:31:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 07:31:05] ANSI_COLOR="0;31"
[2026-01-26 07:31:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 07:31:05] HOME_URL="https://www.centos.org/"
[2026-01-26 07:31:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 07:31:05] 
[2026-01-26 07:31:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 07:31:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 07:31:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 07:31:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 07:31:05] 
[2026-01-26 07:31:05] 2026-01-26 12:30:11,733 | INFO     | **************************************
[2026-01-26 07:31:05] 2026-01-26 12:30:12,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 07:31:05] 2026-01-26 12:30:12,498 | INFO     | sufficient remaining disk space (73092038656 B)
[2026-01-26 07:31:05] 2026-01-26 12:30:12,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 07:31:05] 2026-01-26 12:30:12,499 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 07:31:05] 2026-01-26 12:30:12,499 | INFO     | update_server=False
[2026-01-26 07:31:05] 2026-01-26 12:30:12,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 07:31:05] 2026-01-26 12:30:12,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 07:31:05] 2026-01-26 12:30:12,586 | INFO     | all payload control threads have been joined
[2026-01-26 07:31:05] 2026-01-26 12:30:12,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 07:31:05] 2026-01-26 12:30:12,701 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 07:31:05] 2026-01-26 12:30:12,701 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 07:31:05] 2026-01-26 12:30:12,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:31:05] 2026-01-26 12:30:12,702 | INFO     | will abort loop
[2026-01-26 07:31:05] 2026-01-26 12:30:13,527 | INFO     | [job] retrieve thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:13,563 | INFO     | all data control threads have been joined
[2026-01-26 07:31:05] 2026-01-26 12:30:13,598 | INFO     | [payload] control thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:13,629 | INFO     | all job control threads have been joined
[2026-01-26 07:31:05] 2026-01-26 12:30:13,708 | INFO     | [job] job monitor thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:31:05] 2026-01-26 12:30:14,220 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,227 | INFO     | [job] validate thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,240 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,247 | INFO     | [data] copytool_in thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,258 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,265 | INFO     | [payload] failed_post thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,509 | INFO     | [data] copytool_out thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,518 | INFO     | [payload] validate_post thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,569 | INFO     | [data] control thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,656 | INFO     | [job] control thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:14,744 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:15,142 | INFO     | [job] queue monitor thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:16,604 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 07:31:05] 2026-01-26 12:30:39,380 | INFO     | PID=3464455 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 07:31:05] 2026-01-26 12:30:39,381 | INFO     | .. there are 29 such processes running
[2026-01-26 07:31:05] 2026-01-26 12:30:39,381 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 07:31:05] 2026-01-26 12:30:39,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 07:31:05] 2026-01-26 12:30:39,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 07:31:05] 2026-01-26 12:30:56,685 | INFO     | [monitor] cgroup control has ended
[2026-01-26 07:31:05] 2026-01-26 12:30:57,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173084133184)>', '<ExcThread(monitor, started 140172255536896)>']
[2026-01-26 07:31:05] 2026-01-26 12:30:58,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 07:31:05] 2026-01-26 12:30:58,511 | INFO     | [monitor] control thread has ended
[2026-01-26 07:31:05] 2026-01-26 12:31:03,000 | INFO     | all workflow threads have been joined
[2026-01-26 07:31:05] 2026-01-26 12:31:03,000 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 07:31:05] 2026-01-26 12:31:03,000 | INFO     | traces error code: 0
[2026-01-26 07:31:05] 2026-01-26 12:31:03,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 07:31:05] 2026-01-26 12:31:03,882 [wrapper] ==== pilot stdout END ====
[2026-01-26 07:31:05] 2026-01-26 12:31:03,957 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 07:31:05] 2026-01-26 12:31:04,001 [wrapper] pilotpid: 3464455
[2026-01-26 07:31:05] 2026-01-26 12:31:04,036 [wrapper] Pilot exit status: 0
[2026-01-26 07:31:05] 2026-01-26 12:31:04,208 [wrapper] pandaids: 6983015969
[2026-01-26 07:31:05] 2026-01-26 12:31:04,355 [wrapper] cleanup supervisor_pilot 1636186 3464456
[2026-01-26 07:31:05] 2026-01-26 12:31:04,360 [wrapper] Test setup, not cleaning
[2026-01-26 07:31:05] 2026-01-26 12:31:04,389 [wrapper] apfmon messages muted
[2026-01-26 07:31:05] 2026-01-26 12:31:04,486 [wrapper] ==== wrapper stdout END ====
[2026-01-26 07:31:05] 2026-01-26 12:31:04,512 [wrapper] ==== wrapper stderr END ====
[2026-01-26 07:31:05]  *** Error codes and diagnostics ***
[2026-01-26 07:31:05]     "exeErrorCode": 0,
[2026-01-26 07:31:05]     "exeErrorDiag": "",
[2026-01-26 07:31:05]     "pilotErrorCode": 0,
[2026-01-26 07:31:05]     "pilotErrorDiag": "",
[2026-01-26 07:31:05]  *** Listing of results directory ***
[2026-01-26 07:31:05] total 690528
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 09:11 pilot3.tar.gz
[2026-01-26 07:31:05] -rwx------. 1 boincer umatlas     36322 Jan 25 09:14 runpilot2-wrapper.sh
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 09:18 queuedata.json
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas       100 Jan 25 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 07:31:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 25 19:17 run_atlas
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas       105 Jan 25 19:17 job.xml
[2026-01-26 07:31:05] -rw-r--r--. 2 boincer umatlas 503459692 Jan 25 19:17 EVNT.48317929._000025.pool.root.1
[2026-01-26 07:31:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 25 19:17 start_atlas.sh
[2026-01-26 07:31:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 25 19:17 shared
[2026-01-26 07:31:05] -rw-r--r--. 2 boincer umatlas    597753 Jan 25 19:17 input.tar.gz
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas         0 Jan 25 19:17 boinc_lockfile
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas      2508 Jan 25 19:17 pandaJob.out
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas        57 Jan 25 19:17 setup.sh.local
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas   1004246 Jan 25 19:18 agis_schedconf.cvmfs.json
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas       440 Jan 25 19:19 workernode_map.json
[2026-01-26 07:31:05] drwx------. 5 boincer umatlas      4096 Jan 25 19:19 pilot3
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas 187490761 Jan 26 07:26 HITS.48317931._001246.pool.root.1
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas       532 Jan 26 07:26 boinc_task_state.xml
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas      6659 Jan 26 07:28 init_data.xml
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas      1055 Jan 26 07:29 memory_monitor_summary.json
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas   1516246 Jan 26 07:29 agis_ddmendpoints.agis.ALL.json
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas        95 Jan 26 07:29 pilot_heartbeat.json
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas    840232 Jan 26 07:29 log.48317931._001246.job.log.tgz.1
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas      6410 Jan 26 07:30 heartbeat.json
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 07:30 boinc_mmap_file
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas        28 Jan 26 07:30 wrapper_checkpoint.txt
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas      5006 Jan 26 07:31 pilotlog.txt
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas   5262705 Jan 26 07:31 log.48317931._001246.job.log.1
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas       357 Jan 26 07:31 output.list
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas       620 Jan 26 07:31 runtime_log
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas   6123520 Jan 26 07:31 result.tar.gz
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas       661 Jan 26 07:31 vPWLDm63F48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEA1KDmGxuoVo.diag
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas      9332 Jan 26 07:31 runtime_log.err
[2026-01-26 07:31:05] -rw-r--r--. 1 boincer umatlas     21037 Jan 26 07:31 stderr.txt
[2026-01-26 07:31:05] HITS file was successfully produced:
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas 187490761 Jan 26 07:26 shared/HITS.pool.root.1
[2026-01-26 07:31:05]  *** Contents of shared directory: ***
[2026-01-26 07:31:05] total 681344
[2026-01-26 07:31:05] -rw-r--r--. 2 boincer umatlas 503459692 Jan 25 19:17 ATLAS.root_0
[2026-01-26 07:31:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 25 19:17 start_atlas.sh
[2026-01-26 07:31:05] -rw-r--r--. 2 boincer umatlas    597753 Jan 25 19:17 input.tar.gz
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas 187490761 Jan 26 07:26 HITS.pool.root.1
[2026-01-26 07:31:05] -rw-------. 1 boincer umatlas   6123520 Jan 26 07:31 result.tar.gz
07:31:07 (3458731): run_atlas exited; CPU time 55090.863738
07:31:07 (3458731): called boinc_finish(0)

</stderr_txt>
]]>

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