Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 15:53:48 (9624): vboxwrapper version 26210
2026-01-25 15:53:48 (9624): BOINC client version: 8.0.2
2026-01-25 15:53:49 (9624): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2026-01-25 15:53:49 (9624): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 15:53:49 (9624): Create VM. (boinc_e736830b56f65c8b, slot#4)
2026-01-25 15:53:50 (9624): Setting Memory Size for VM. (4600MB)
2026-01-25 15:53:50 (9624): Setting CPU Count for VM. (6)
2026-01-25 15:53:50 (9624): Setting Chipset Options for VM.
2026-01-25 15:53:51 (9624): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 15:53:51 (9624): Setting Boot Options for VM.
2026-01-25 15:53:52 (9624): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 15:53:52 (9624): Enabling VM Network Access.
2026-01-25 15:53:52 (9624): Disabling USB Support for VM.
2026-01-25 15:53:52 (9624): Disabling COM Port Support for VM.
2026-01-25 15:53:53 (9624): Disabling LPT Port Support for VM.
2026-01-25 15:53:53 (9624): Disabling Audio Support for VM.
2026-01-25 15:53:53 (9624): Disabling Clipboard Support for VM.
2026-01-25 15:53:53 (9624): Disabling Drag and Drop Support for VM.
2026-01-25 15:53:54 (9624): Adding storage controller(s) to VM.
2026-01-25 15:53:54 (9624): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 15:53:54 (9624): Adding VirtualBox Guest Additions to VM.
2026-01-25 15:53:55 (9624): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 15:53:55 (9624): forwarding host port 5390 to guest port 80
2026-01-25 15:53:55 (9624): Enabling remote desktop for VM.
2026-01-25 15:53:56 (9624): Required extension pack not installed, remote desktop not enabled.
2026-01-25 15:53:56 (9624): Enabling shared directory for VM.
2026-01-25 15:53:56 (9624): Starting VM using VBoxManage interface. (boinc_e736830b56f65c8b, slot#4)
2026-01-25 15:54:04 (9624): Successfully started VM. (PID = '8088')
2026-01-25 15:54:04 (9624): Reporting VM Process ID to BOINC.
2026-01-25 15:54:04 (9624): Guest Log: BIOS: VirtualBox 6.0.14
2026-01-25 15:54:04 (9624): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 15:54:04 (9624): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 15:54:04 (9624): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 15:54:04 (9624): Detected: Web Application Enabled (http://localhost:5390)
2026-01-25 15:54:04 (9624): Preference change detected
2026-01-25 15:54:04 (9624): Setting CPU throttle for VM. (100%)
2026-01-25 15:54:04 (9624): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 15:54:06 (9624): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 15:54:06 (9624): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 15:54:10 (9624): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 15:54:10 (9624): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 15:54:10 (9624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 15:54:21 (9624): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 15:54:21 (9624): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-25 15:54:35 (9624): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000334 main     Log opened 2026-01-25T15:54:33.636251000Z
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000539 main     OS Product: Linux
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000619 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000765 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000842 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000845 main     Process ID: 1341
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.000847 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 15:54:35 (9624): Guest Log: 00:00:00.002758 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 15:54:36 (9624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 15:54:36 (9624): Guest Log: [INFO] Mounting shared directory
2026-01-25 15:54:36 (9624): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 15:54:42 (9624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 15:54:42 (9624): Guest Log: [INFO] Detected branch: prod
2026-01-25 15:54:42 (9624): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 15:54:42 (9624): Guest Log: Copying input files
2026-01-25 15:54:45 (9624): Guest Log: 00:00:10.007067 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 525 377 000ns (GuestNow=1 769 385 285 167 649 000 ns GuestLast=1 769 356 473 642 272 000 ns fSetTimeLastLoop=true )
2026-01-25 15:54:49 (9624): Guest Log: Copied input files into RunAtlas.
2026-01-25 15:54:49 (9624): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 15:54:49 (9624): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 15:54:49 (9624): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 15:54:49 (9624): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 15:55:02 (9624): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 15:55:03 (9624): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 15:55:03 (9624): Guest Log: 2.6.3.0 1620 0 30156 155525 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 15:55:05 (9624): Guest Log: copied the webapp to /var/www
2026-01-25 15:55:05 (9624): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-25 15:55:05 (9624): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-25 15:55:06 (9624): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 15:55:06 (9624): Guest Log:  *** Starting ATLAS job. (PandaID=6983016791 taskID=48317931) ***
2026-01-25 17:34:15 (9624): Status Report: Elapsed Time: '6000.000000'
2026-01-25 17:34:15 (9624): Status Report: CPU Time: '25166.828125'
2026-01-25 19:14:26 (9624): Status Report: Elapsed Time: '12000.000000'
2026-01-25 19:14:26 (9624): Status Report: CPU Time: '60922.015625'
2026-01-25 20:54:34 (9624): Status Report: Elapsed Time: '18000.000000'
2026-01-25 20:54:34 (9624): Status Report: CPU Time: '96634.437500'
2026-01-25 22:34:41 (9624): Status Report: Elapsed Time: '24000.000000'
2026-01-25 22:34:41 (9624): Status Report: CPU Time: '132341.125000'
2026-01-26 00:03:33 (9624): Guest Log:  *** Job finished ***
2026-01-26 00:03:33 (9624): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:25,683 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:25,684 | INFO     | traces error code: 0
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:25,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,017 | INFO     | PID=6086 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,018 | INFO     | found 0 job(s) in 20 queues
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,019 | CRITICAL | thread 'MainThread' is not alive
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,019 | INFO     | [monitor] control thread has ended
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,239 [wrapper] ==== pilot stdout END ====
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,252 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,264 [wrapper] pilotpid: 6086
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:30,277 [wrapper] Pilot exit status: 0
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:32,033 [wrapper] pandaids: 6983016791
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:32,123 [wrapper] cleanup supervisor_pilot   751 6087
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:32,139 [wrapper] Test setup, not cleaning
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:32,155 [wrapper] apfmon messages muted
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:32,170 [wrapper] ==== wrapper stdout END ====
2026-01-26 00:03:33 (9624): Guest Log: 2026-01-26 08:03:32,183 [wrapper] ==== wrapper stderr END ====
2026-01-26 00:03:33 (9624): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 00:03:33 (9624): Guest Log:     "exeErrorCode": 0,
2026-01-26 00:03:33 (9624): Guest Log:     "exeErrorDiag": "",
2026-01-26 00:03:33 (9624): Guest Log:     "pilotErrorCode": 0,
2026-01-26 00:03:33 (9624): Guest Log:     "pilotErrorDiag": "",
2026-01-26 00:03:33 (9624): Guest Log:  *** Listing of results directory ***
2026-01-26 00:03:33 (9624): Guest Log: total 198660
2026-01-26 00:03:33 (9624): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 14:11 pilot3.tar.gz
2026-01-26 00:03:33 (9624): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 14:11 queuedata.json
2026-01-26 00:03:33 (9624): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 14:12 runpilot2-wrapper.sh
2026-01-26 00:03:33 (9624): Guest Log: -rwxr-xr-x. 1 atlas atlas      9204 Jan 25 23:54 init_data.xml
2026-01-26 00:03:33 (9624): Guest Log: -rwxr-xr-x. 1 atlas atlas    597751 Jan 25 23:54 input.tar.gz
2026-01-26 00:03:33 (9624): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 23:54 start_atlas.sh
2026-01-26 00:03:33 (9624): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 23:54 EVNT.48317929._000029.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 00:03:33 (9624): Guest Log: -rw-r--r--. 1 atlas atlas      2508 Jan 25 23:55 pandaJob.out
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas       429 Jan 26 00:00 workernode_map.json
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 26 00:00 agis_schedconf.cvmfs.json
2026-01-26 00:03:33 (9624): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 00:00 pilot3
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas 190357393 Jan 26 08:01 HITS.48317931._001444.pool.root.1
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas      1030 Jan 26 08:02 memory_monitor_summary.json
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas        95 Jan 26 08:02 pilot_heartbeat.json
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 08:02 agis_ddmendpoints.agis.ALL.json
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas    660276 Jan 26 08:02 log.48317931._001444.job.log.tgz.1
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas      6380 Jan 26 08:02 heartbeat.json
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas       814 Jan 26 08:03 pilotlog.txt
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas   3942900 Jan 26 08:03 log.48317931._001444.job.log.1
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 08:03 output.list
2026-01-26 00:03:33 (9624): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 08:03 runtime_log
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas   4618240 Jan 26 08:03 result.tar.gz
2026-01-26 00:03:33 (9624): Guest Log: -rw-r--r--. 1 atlas atlas      8776 Jan 26 08:03 runtime_log.err
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas       668 Jan 26 08:03 nSaKDmK2F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmak7KDmcnuaPo.diag
2026-01-26 00:03:33 (9624): Guest Log: Looking for outputfile HITS.48317931._001444.pool.root.1
2026-01-26 00:03:33 (9624): Guest Log: HITS file was successfully produced
2026-01-26 00:03:33 (9624): Guest Log: -rw-------. 1 atlas atlas 190357393 Jan 26 08:01 /home/atlas/RunAtlas/HITS.48317931._001444.pool.root.1
2026-01-26 00:03:35 (9624): Guest Log: Successfully finished the ATLAS job!
2026-01-26 00:03:35 (9624): Guest Log: Copying the results back to the shared directory!
2026-01-26 00:03:36 (9624): Guest Log:  *** Contents of shared directory: ***
2026-01-26 00:03:36 (9624): Guest Log: total 675096
2026-01-26 00:03:36 (9624): Guest Log: -rwxrwxrwx. 1 root root 495690895 Jan 25 23:53 ATLAS.root_0
2026-01-26 00:03:36 (9624): Guest Log: -rwxrwxrwx. 1 root root 190357393 Jan 26 08:03 HITS.pool.root.1
2026-01-26 00:03:36 (9624): Guest Log: -rwxrwxrwx. 1 root root      9204 Jan 25 23:53 init_data.xml
2026-01-26 00:03:36 (9624): Guest Log: -rwxrwxrwx. 1 root root    597751 Jan 25 23:47 input.tar.gz
2026-01-26 00:03:36 (9624): Guest Log: -rwxrwxrwx. 1 root root   4618240 Jan 26 08:03 result.tar.gz
2026-01-26 00:03:36 (9624): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 23:47 start_atlas.sh
2026-01-26 00:03:36 (9624): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 00:03:36 (9624): VM Completion File Detected.
2026-01-26 00:03:36 (9624): Powering off VM.
2026-01-26 00:03:38 (9624): Successfully stopped VM.
2026-01-26 00:03:38 (9624): Deregistering VM. (boinc_e736830b56f65c8b, slot#4)
2026-01-26 00:03:38 (9624): Removing network bandwidth throttle group from VM.
2026-01-26 00:03:39 (9624): Removing VM from VirtualBox.
2026-01-26 00:03:44 (9624): called boinc_finish(0)

</stderr_txt>
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