Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:39:45 (2065265): wrapper (7.7.26015): starting
01:39:45 (2065265): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 01:39:45] Arguments: --nthreads 4
[2026-01-27 01:39:45] Threads: 4
[2026-01-27 01:39:45] Checking for CVMFS
[2026-01-27 01:39:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:39:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:39:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:39:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:39:49] 2.13.3.0 897907 8387 57164 155549 2 188 3892519 6144000 2733 130560 0 12407877 99.980 469044 112 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-27 01:39:49] CVMFS is ok
[2026-01-27 01:39:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:39:49] Checking for apptainer binary...
[2026-01-27 01:39:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:39:49] Running /usr/bin/apptainer --version
[2026-01-27 01:39:49] apptainer version 1.4.0
[2026-01-27 01:39:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:39:50] Zen
[2026-01-27 01:39:50] apptainer works
[2026-01-27 01:39:50] Set ATHENA_PROC_NUMBER=4
[2026-01-27 01:39:50] Set ATHENA_CORE_NUMBER=4
[2026-01-27 01:39:50] Starting ATLAS job with PandaID=6983327715
[2026-01-27 01:39:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:40:34]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:40:34] 2026-01-26 17:39:28,120 | INFO     | time since job start (10756s) is within the limit (349056.0s)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,731 | INFO     | job 6983327715 has state=finished
[2026-01-27 04:40:34] 2026-01-26 17:39:28,731 | INFO     | preparing for final server update for job 6983327715 in state='finished'
[2026-01-27 04:40:34] 2026-01-26 17:39:28,731 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/3/PanDA_Pilot-6983327715/jobReport.json
[2026-01-27 04:40:34] 2026-01-26 17:39:28,733 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/3/workernode_map.json
[2026-01-27 04:40:34] 2026-01-26 17:39:28,733 | INFO     | this job has now completed (state=finished)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,733 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,733 | INFO     | log transfer has been attempted: DONE
[2026-01-27 04:40:34] 2026-01-26 17:39:28,733 | INFO     | job 6983327715 has finished - writing final server update
[2026-01-27 04:40:34] 2026-01-26 17:39:28,734 | INFO     | total number of processed events: 400 (read)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,737 | INFO     | using path: /home/michael/Boinc/BOINC/slots/3/PanDA_Pilot-6983327715/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,737 | INFO     | extracted standard info from prmon json
[2026-01-27 04:40:34] 2026-01-26 17:39:28,737 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 04:40:34] 2026-01-26 17:39:28,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 04:40:34] 2026-01-26 17:39:28,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 04:40:34] 2026-01-26 17:39:28,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 04:40:34] 2026-01-26 17:39:28,740 | INFO     | fitting pss+swap vs Time
[2026-01-27 04:40:34] 2026-01-26 17:39:28,740 | INFO     | sum of square deviations: 1690450300.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,740 | INFO     | sum of deviations: 16836673348.499998
[2026-01-27 04:40:34] 2026-01-26 17:39:28,741 | INFO     | mean x: 1769443768.5
[2026-01-27 04:40:34] 2026-01-26 17:39:28,741 | INFO     | mean y: 2326958.2443181816
[2026-01-27 04:40:34] 2026-01-26 17:39:28,741 | INFO     | intersect: -17621111446.76135
[2026-01-27 04:40:34] 2026-01-26 17:39:28,741 | INFO     | chi2: 1.966085472125609
[2026-01-27 04:40:34] 2026-01-26 17:39:28,741 | INFO     | sum of square deviations: 1550429070.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | sum of deviations: 16429662713.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | mean x: 1769443616.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | mean y: 2326515.619883041
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | intersect: -18748200266.33157
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | chi2: 1.96815366485398
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | current chi2=1.96815366485398 (change=-0.10519342916129673 %)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | right removable region: 170
[2026-01-27 04:40:34] 2026-01-26 17:39:28,742 | INFO     | sum of square deviations: 1550429070.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,743 | INFO     | sum of deviations: -15776043076.999996
[2026-01-27 04:40:34] 2026-01-26 17:39:28,743 | INFO     | mean x: 1769443921.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,743 | INFO     | mean y: 2362165.350877193
[2026-01-27 04:40:34] 2026-01-26 17:39:28,743 | INFO     | intersect: 18006941710.567852
[2026-01-27 04:40:34] 2026-01-26 17:39:28,743 | INFO     | chi2: 0.04676321921792235
[2026-01-27 04:40:34] 2026-01-26 17:39:28,743 | INFO     | current chi2=0.04676321921792235 (change=97.62150629355067 %)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,744 | INFO     | sum of square deviations: 1418361477.5
[2026-01-27 04:40:34] 2026-01-26 17:39:28,744 | INFO     | sum of deviations: -15486470251.499998
[2026-01-27 04:40:34] 2026-01-26 17:39:28,744 | INFO     | mean x: 1769444073.5
[2026-01-27 04:40:34] 2026-01-26 17:39:28,744 | INFO     | mean y: 2361807.391566265
[2026-01-27 04:40:34] 2026-01-26 17:39:28,744 | INFO     | intersect: 19322149774.45494
[2026-01-27 04:40:34] 2026-01-26 17:39:28,744 | INFO     | chi2: 0.0422948377878469
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | current chi2=0.0422948377878469 (change=9.555333240109585 %)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | left removable region: 20
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | sum of square deviations: 1046484737.5
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | sum of deviations: -10928636719.0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | mean x: 1769444195.5
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | mean y: 2357141.9066666667
[2026-01-27 04:40:34] 2026-01-26 17:39:28,745 | INFO     | intersect: 18480995304.71381
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | chi2: 0.039096336959519196
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | current memory leak: -10.44 B/s (using 150 data points, chi2=0.04)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | could have reported an average CPU frequency of 4062 MHz (9 samples)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | ..............................
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . Timing measurements:
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . get job = 0 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . initial setup = 8 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . payload setup = 4 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . stage-in = 0 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . payload execution = 10731 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . stage-out = 0 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,746 | INFO     | . log creation = 0 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,747 | INFO     | ..............................
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | 
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | job summary report
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | --------------------------------------------------
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | PanDA job id: 6983327715
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | task id: 48329718
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | errors: (none)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | pilot state: finished 
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | transexitcode: 0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | exeerrorcode: 0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | exeerrordiag: 
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | exitcode: 0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | exitmsg: OK
[2026-01-27 04:40:34] 2026-01-26 17:39:28,795 | INFO     | cpuconsumptiontime: 41662 s
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | nevents: 400
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | neventsw: 0
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | pid: 2073960
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | pgrp: 2073960
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | corecount: 4
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | event service: False
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | sizes: {0: 2283929, 1: 2284390, 11: 2284390, 10739: 2313562, 10741: 2322582, 10744: 2322638, 10746: 2323024}
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | --------------------------------------------------
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | 
[2026-01-27 04:40:34] 2026-01-26 17:39:28,796 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/3
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | job 6983327715 has completed (purged errors)
[2026-01-27 04:40:34] 2026-01-26 17:39:28,813 | INFO     | overall cleanup function is called
[2026-01-27 04:40:34] 2026-01-26 17:39:29,820 | INFO     | --- collectZombieJob: --- 10, [2073960]
[2026-01-27 04:40:34] 2026-01-26 17:39:29,820 | INFO     | zombie collector waiting for pid 2073960
[2026-01-27 04:40:34] 2026-01-26 17:39:29,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 04:40:34] 2026-01-26 17:39:29,820 | INFO     | collected zombie processes
[2026-01-27 04:40:34] 2026-01-26 17:39:29,820 | INFO     | will attempt to kill all subprocesses of pid=2073960
[2026-01-27 04:40:34] 2026-01-26 17:39:29,949 | INFO     | process IDs to be killed: [2073960] (in reverse order)
[2026-01-27 04:40:34] 2026-01-26 17:39:30,002 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 04:40:34] 2026-01-26 17:39:30,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 04:40:34] 2026-01-26 17:39:30,005 | INFO     | did not find any defunct processes belonging to 2073960
[2026-01-27 04:40:34] 2026-01-26 17:39:30,008 | INFO     | did not find any defunct processes belonging to 2073960
[2026-01-27 04:40:34] 2026-01-26 17:39:30,008 | INFO     | ready for new job
[2026-01-27 04:40:34] 2026-01-26 17:39:30,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 04:40:34] 2026-01-26 17:39:30,009 | INFO     | **************************************
[2026-01-27 04:40:34] 2026-01-26 17:39:30,009 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 04:40:34] 2026-01-26 17:39:30,009 | INFO     | **************************************
[2026-01-27 04:40:34] 2026-01-26 17:39:30,009 | INFO     | 
[2026-01-27 04:40:34] 2026-01-26 17:39:30,010 | INFO     | architecture information:
[2026-01-27 04:40:34] 2026-01-26 17:39:30,010 | INFO     | executing command: cat /etc/os-release
[2026-01-27 04:40:34] 2026-01-26 17:39:30,021 | INFO     | cat /etc/os-release:
[2026-01-27 04:40:34] NAME="CentOS Linux"
[2026-01-27 04:40:34] VERSION="7 (Core)"
[2026-01-27 04:40:34] ID="centos"
[2026-01-27 04:40:34] ID_LIKE="rhel fedora"
[2026-01-27 04:40:34] VERSION_ID="7"
[2026-01-27 04:40:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 04:40:34] ANSI_COLOR="0;31"
[2026-01-27 04:40:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 04:40:34] HOME_URL="https://www.centos.org/"
[2026-01-27 04:40:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 04:40:34] 
[2026-01-27 04:40:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 04:40:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 04:40:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 04:40:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 04:40:34] 
[2026-01-27 04:40:34] 2026-01-26 17:39:30,021 | INFO     | **************************************
[2026-01-27 04:40:34] 2026-01-26 17:39:30,524 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/3
[2026-01-27 04:40:34] 2026-01-26 17:39:30,537 | INFO     | sufficient remaining disk space (196064837632 B)
[2026-01-27 04:40:34] 2026-01-26 17:39:30,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 04:40:34] 2026-01-26 17:39:30,538 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 04:40:34] 2026-01-26 17:39:30,538 | INFO     | update_server=False
[2026-01-27 04:40:34] 2026-01-26 17:39:30,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 04:40:34] 2026-01-26 17:39:30,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:40:34] 2026-01-26 17:39:30,538 | INFO     | aborting loop
[2026-01-27 04:40:34] 2026-01-26 17:39:30,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:40:34] 2026-01-26 17:39:31,093 | INFO     | all data control threads have been joined
[2026-01-27 04:40:34] 2026-01-26 17:39:31,474 | INFO     | all payload control threads have been joined
[2026-01-27 04:40:34] 2026-01-26 17:39:31,543 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:31,543 | INFO     | [job] retrieve thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:31,544 | INFO     | [job] queue monitor thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:31,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 04:40:34] 2026-01-26 17:39:31,857 | INFO     | all job control threads have been joined
[2026-01-27 04:40:34] 2026-01-26 17:39:32,098 | INFO     | [data] control thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,183 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,196 | INFO     | [payload] failed_post thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,479 | INFO     | [payload] control thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,495 | INFO     | [job] validate thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,534 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,708 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,712 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 04:40:34] 2026-01-26 17:39:32,825 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,862 | INFO     | [job] control thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:32,980 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:33,765 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:39:36,761 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:40:34] 2026-01-26 17:40:01,339 | INFO     | PID=2069441 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 04:40:34] 2026-01-26 17:40:01,339 | INFO     | .. there are 4 such processes running
[2026-01-27 04:40:34] 2026-01-26 17:40:01,340 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 04:40:34] 2026-01-26 17:40:01,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 04:40:34] 2026-01-26 17:40:01,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:40:34] 2026-01-26 17:40:03,380 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-01-27 04:40:34] 2026-01-26 17:40:29,224 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:40:34] 2026-01-26 17:40:29,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137126969919296)>', '<ExcThread(monitor, started 137126335203072)>']
[2026-01-27 04:40:34] 2026-01-26 17:40:29,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:40:34] 2026-01-26 17:40:29,480 | INFO     | [monitor] control thread has ended
[2026-01-27 04:40:34] 2026-01-26 17:40:34,440 | INFO     | all workflow threads have been joined
[2026-01-27 04:40:34] 2026-01-26 17:40:34,440 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:40:34] 2026-01-26 17:40:34,440 | INFO     | traces error code: 0
[2026-01-27 04:40:34] 2026-01-26 17:40:34,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:40:34] 2026-01-26 17:40:34,517 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:40:34] 2026-01-26 17:40:34,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:40:34] 2026-01-26 17:40:34,522 [wrapper] pilotpid: 2069441
[2026-01-27 04:40:34] 2026-01-26 17:40:34,524 [wrapper] Pilot exit status: 0
[2026-01-27 04:40:34] 2026-01-26 17:40:34,532 [wrapper] pandaids: 6983327715
[2026-01-27 04:40:34] 2026-01-26 17:40:34,566 [wrapper] cleanup supervisor_pilot 2148320 2069442
[2026-01-27 04:40:34] 2026-01-26 17:40:34,568 [wrapper] Test setup, not cleaning
[2026-01-27 04:40:34] 2026-01-26 17:40:34,570 [wrapper] apfmon messages muted
[2026-01-27 04:40:34] 2026-01-26 17:40:34,572 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:40:34] 2026-01-26 17:40:34,574 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:40:34]  *** Error codes and diagnostics ***
[2026-01-27 04:40:34]     "exeErrorCode": 0,
[2026-01-27 04:40:34]     "exeErrorDiag": "",
[2026-01-27 04:40:34]     "pilotErrorCode": 0,
[2026-01-27 04:40:34]     "pilotErrorDiag": "",
[2026-01-27 04:40:34]  *** Listing of results directory ***
[2026-01-27 04:40:34] total 461232
[2026-01-27 04:40:34] -rw-r--r-- 1 michael michael    584422 Jan 26 05:47 pilot3.tar.gz
[2026-01-27 04:40:34] -rwx------ 1 michael michael     36322 Jan 26 05:49 runpilot2-wrapper.sh
[2026-01-27 04:40:34] -rw-r--r-- 1 michael michael      5111 Jan 26 05:52 queuedata.json
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael       100 Jan 27 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:40:34] -rwxr-xr-x 1 michael michael      7986 Jan 27 01:39 run_atlas
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael       105 Jan 27 01:39 job.xml
[2026-01-27 04:40:34] -rw-r--r-- 2 michael michael 273899806 Jan 27 01:39 EVNT.48329716._000002.pool.root.1
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael      9823 Jan 27 01:39 init_data.xml
[2026-01-27 04:40:34] drwxrwx--x 2 michael michael      4096 Jan 27 01:39 shared
[2026-01-27 04:40:34] -rw-r--r-- 2 michael michael    597772 Jan 27 01:39 input.tar.gz
[2026-01-27 04:40:34] -rw-r--r-- 2 michael michael     15845 Jan 27 01:39 start_atlas.sh
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael         0 Jan 27 01:39 boinc_lockfile
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael      2603 Jan 27 01:39 pandaJob.out
[2026-01-27 04:40:34] -rw------- 1 michael michael        50 Jan 27 01:39 setup.sh.local
[2026-01-27 04:40:34] -rw------- 1 michael michael   1002189 Jan 27 01:40 agis_schedconf.cvmfs.json
[2026-01-27 04:40:34] -rw------- 1 michael michael   1516246 Jan 27 01:40 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:40:34] -rw------- 1 michael michael       418 Jan 27 01:40 workernode_map.json
[2026-01-27 04:40:34] drwx------ 5 michael michael      4096 Jan 27 01:40 pilot3
[2026-01-27 04:40:34] -rw------- 1 michael michael 190642548 Jan 27 04:39 HITS.48329718._000029.pool.root.1
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael       530 Jan 27 04:39 boinc_task_state.xml
[2026-01-27 04:40:34] -rw------- 1 michael michael      1024 Jan 27 04:39 memory_monitor_summary.json
[2026-01-27 04:40:34] -rw------- 1 michael michael    342869 Jan 27 04:39 log.48329718._000029.job.log.tgz.1
[2026-01-27 04:40:34] -rw------- 1 michael michael      6268 Jan 27 04:39 heartbeat.json
[2026-01-27 04:40:34] -rw------- 1 michael michael        95 Jan 27 04:40 pilot_heartbeat.json
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael      8192 Jan 27 04:40 boinc_mmap_file
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael        28 Jan 27 04:40 wrapper_checkpoint.txt
[2026-01-27 04:40:34] -rw------- 1 michael michael      4831 Jan 27 04:40 pilotlog.txt
[2026-01-27 04:40:34] -rw------- 1 michael michael   1562777 Jan 27 04:40 log.48329718._000029.job.log.1
[2026-01-27 04:40:34] -rw------- 1 michael michael       357 Jan 27 04:40 output.list
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael       620 Jan 27 04:40 runtime_log
[2026-01-27 04:40:34] -rw------- 1 michael michael   1925120 Jan 27 04:40 result.tar.gz
[2026-01-27 04:40:34] -rw------- 1 michael michael       643 Jan 27 04:40 VCvMDmUMK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlZ1KDmYx7S3m.diag
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael      9445 Jan 27 04:40 runtime_log.err
[2026-01-27 04:40:34] -rw-rw-r-- 1 michael michael     20992 Jan 27 04:40 stderr.txt
[2026-01-27 04:40:34] HITS file was successfully produced:
[2026-01-27 04:40:34] -rw------- 1 michael michael 190642548 Jan 27 04:39 shared/HITS.pool.root.1
[2026-01-27 04:40:34]  *** Contents of shared directory: ***
[2026-01-27 04:40:34] total 456148
[2026-01-27 04:40:34] -rw-r--r-- 2 michael michael 273899806 Jan 27 01:39 ATLAS.root_0
[2026-01-27 04:40:34] -rw-r--r-- 2 michael michael    597772 Jan 27 01:39 input.tar.gz
[2026-01-27 04:40:34] -rw-r--r-- 2 michael michael     15845 Jan 27 01:39 start_atlas.sh
[2026-01-27 04:40:34] -rw------- 1 michael michael 190642548 Jan 27 04:39 HITS.pool.root.1
[2026-01-27 04:40:34] -rw------- 1 michael michael   1925120 Jan 27 04:40 result.tar.gz
04:40:35 (2065265): run_atlas exited; CPU time 41798.808132
04:40:35 (2065265): called boinc_finish(0)

</stderr_txt>
]]>

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