Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:08:20 (3989891): wrapper (7.7.26015): starting
06:08:20 (3989891): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 06:08:20] Arguments: --nthreads 3
[2026-01-26 06:08:20] Threads: 3
[2026-01-26 06:08:20] Checking for CVMFS
[2026-01-26 06:08:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 06:08:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 06:08:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 06:08:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 06:08:22] 2.9.2.0 1590521 6964 87844 155532 1 50 25295179 36864001 0 130560 0 3122044 99.988 209141 4177 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 06:08:22] CVMFS is ok
[2026-01-26 06:08:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 06:08:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 06:08:22] Further information can be found at the LHC@home message board.
[2026-01-26 06:08:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 06:08:22] Checking for apptainer binary...
[2026-01-26 06:08:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 06:08:22] Running /usr/bin/apptainer --version
[2026-01-26 06:08:22] apptainer version 1.4.1-1.1
[2026-01-26 06:08:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 06:08:22] legendA163
[2026-01-26 06:08:22] apptainer works
[2026-01-26 06:08:22] Set ATHENA_PROC_NUMBER=3
[2026-01-26 06:08:22] Set ATHENA_CORE_NUMBER=3
[2026-01-26 06:08:22] Starting ATLAS job with PandaID=6983328305
[2026-01-26 06:08:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 07:35:51]  *** The last 200 lines of the pilot log: ***
[2026-01-26 07:35:51]  scope=mc23_13p6TeV
[2026-01-26 07:35:51]  status=None
[2026-01-26 07:35:51]  status_code=0
[2026-01-26 07:35:51]  storage_token=
[2026-01-26 07:35:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983328305/log.48318034._001281.job.log.tgz.1
[2026-01-26 07:35:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/f9/log.48318034._001281.job.log.tgz.1
[2026-01-26 07:35:51]  workdir=None
[2026-01-26 07:35:51] ]
[2026-01-26 07:35:51] 2026-01-26 06:35:15,030 | INFO     | transferring file log.48318034._001281.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983328305/log.48318034._001281.job.log.tgz.1 to /local/data/boinc/
[2026-01-26 07:35:51] 2026-01-26 06:35:15,030 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983328305/log.48318034._001281.job.log.tgz.1 /local/data/boinc/slots/0/log.48318034._0012
[2026-01-26 07:35:51] 2026-01-26 06:35:15,043 | INFO     | adding to output.list: log.48318034._001281.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/f9/log.48318034._001281.job.log.tg
[2026-01-26 07:35:51] 2026-01-26 06:35:15,043 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 07:35:51] 2026-01-26 06:35:15,044 | INFO     | summary of transferred files:
[2026-01-26 07:35:51] 2026-01-26 06:35:15,044 | INFO     |  -- lfn=log.48318034._001281.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 07:35:51] 2026-01-26 06:35:15,044 | INFO     | stage-out finished correctly
[2026-01-26 07:35:51] 2026-01-26 06:35:15,764 | INFO     | time since job start (5202s) is within the limit (349056.0s)
[2026-01-26 07:35:51] 2026-01-26 06:35:16,016 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 07:35:51] 2026-01-26 06:35:17,768 | INFO     | time since job start (5204s) is within the limit (349056.0s)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,154 | INFO     | job 6983328305 has state=finished
[2026-01-26 07:35:51] 2026-01-26 06:35:18,155 | INFO     | preparing for final server update for job 6983328305 in state='finished'
[2026-01-26 07:35:51] 2026-01-26 06:35:18,155 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983328305/jobReport.json
[2026-01-26 07:35:51] 2026-01-26 06:35:18,156 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-26 07:35:51] 2026-01-26 06:35:18,156 | INFO     | this job has now completed (state=finished)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,156 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,156 | INFO     | log transfer has been attempted: DONE
[2026-01-26 07:35:51] 2026-01-26 06:35:18,156 | INFO     | job 6983328305 has finished - writing final server update
[2026-01-26 07:35:51] 2026-01-26 06:35:18,157 | INFO     | total number of processed events: 400 (read)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,158 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983328305/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,158 | INFO     | extracted standard info from prmon json
[2026-01-26 07:35:51] 2026-01-26 06:35:18,158 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 07:35:51] 2026-01-26 06:35:18,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 07:35:51] 2026-01-26 06:35:18,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 07:35:51] 2026-01-26 06:35:18,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 07:35:51] 2026-01-26 06:35:18,159 | INFO     | fitting pss+swap vs Time
[2026-01-26 07:35:51] 2026-01-26 06:35:18,159 | INFO     | sum of square deviations: 147126479.5
[2026-01-26 07:35:51] 2026-01-26 06:35:18,159 | INFO     | sum of deviations: 698469428.4999999
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | mean x: 1769406783.5
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | mean y: 2347743.064102564
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | intersect: -8397748208.768064
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | chi2: 0.004392206721448412
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | current memory leak: 4.75 B/s (using 78 data points, chi2=0.00)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | could have reported an average CPU frequency of 3877 MHz (6 samples)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | ..............................
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . Timing measurements:
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . get job = 0 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . initial setup = 3 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . payload setup = 3 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . stage-in = 0 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . payload execution = 5183 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . stage-out = 0 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | . log creation = 0 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,160 | INFO     | ..............................
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | 
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | job summary report
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | --------------------------------------------------
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | PanDA job id: 6983328305
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | task id: 48318034
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | errors: (none)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | pilot state: finished 
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | transexitcode: 0
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | exeerrorcode: 0
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | exeerrordiag: 
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | exitcode: 0
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | exitmsg: OK
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | cpuconsumptiontime: 14939 s
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | nevents: 400
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | neventsw: 0
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | pid: 3998386
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | pgrp: 3998386
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | corecount: 3
[2026-01-26 07:35:51] 2026-01-26 06:35:18,209 | INFO     | event service: False
[2026-01-26 07:35:51] 2026-01-26 06:35:18,210 | INFO     | sizes: {0: 2283942, 1: 2284232, 11: 2284232, 5190: 2310812, 5191: 2319816, 5192: 2319872, 5194: 2320194}
[2026-01-26 07:35:51] 2026-01-26 06:35:18,210 | INFO     | --------------------------------------------------
[2026-01-26 07:35:51] 2026-01-26 06:35:18,210 | INFO     | 
[2026-01-26 07:35:51] 2026-01-26 06:35:18,210 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-26 07:35:51] 2026-01-26 06:35:18,226 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,226 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,226 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,226 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | job 6983328305 has completed (purged errors)
[2026-01-26 07:35:51] 2026-01-26 06:35:18,227 | INFO     | overall cleanup function is called
[2026-01-26 07:35:51] 2026-01-26 06:35:19,234 | INFO     | --- collectZombieJob: --- 10, [3998386]
[2026-01-26 07:35:51] 2026-01-26 06:35:19,234 | INFO     | zombie collector waiting for pid 3998386
[2026-01-26 07:35:51] 2026-01-26 06:35:19,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 07:35:51] 2026-01-26 06:35:19,234 | INFO     | collected zombie processes
[2026-01-26 07:35:51] 2026-01-26 06:35:19,234 | INFO     | will attempt to kill all subprocesses of pid=3998386
[2026-01-26 07:35:51] 2026-01-26 06:35:19,290 | INFO     | process IDs to be killed: [3998386] (in reverse order)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,320 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 07:35:51] 2026-01-26 06:35:19,321 | INFO     | did not find any defunct processes belonging to 3998386
[2026-01-26 07:35:51] 2026-01-26 06:35:19,323 | INFO     | did not find any defunct processes belonging to 3998386
[2026-01-26 07:35:51] 2026-01-26 06:35:19,323 | INFO     | ready for new job
[2026-01-26 07:35:51] 2026-01-26 06:35:19,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 07:35:51] 2026-01-26 06:35:19,323 | INFO     | **************************************
[2026-01-26 07:35:51] 2026-01-26 06:35:19,324 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 07:35:51] 2026-01-26 06:35:19,324 | INFO     | **************************************
[2026-01-26 07:35:51] 2026-01-26 06:35:19,324 | INFO     | 
[2026-01-26 07:35:51] 2026-01-26 06:35:19,324 | INFO     | architecture information:
[2026-01-26 07:35:51] 2026-01-26 06:35:19,324 | INFO     | executing command: cat /etc/os-release
[2026-01-26 07:35:51] 2026-01-26 06:35:19,333 | INFO     | cat /etc/os-release:
[2026-01-26 07:35:51] NAME="CentOS Linux"
[2026-01-26 07:35:51] VERSION="7 (Core)"
[2026-01-26 07:35:51] ID="centos"
[2026-01-26 07:35:51] ID_LIKE="rhel fedora"
[2026-01-26 07:35:51] VERSION_ID="7"
[2026-01-26 07:35:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 07:35:51] ANSI_COLOR="0;31"
[2026-01-26 07:35:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 07:35:51] HOME_URL="https://www.centos.org/"
[2026-01-26 07:35:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 07:35:51] 
[2026-01-26 07:35:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 07:35:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 07:35:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 07:35:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 07:35:51] 
[2026-01-26 07:35:51] 2026-01-26 06:35:19,334 | INFO     | **************************************
[2026-01-26 07:35:51] 2026-01-26 06:35:19,438 | WARNING  | process 3998386 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 07:35:51] 2026-01-26 06:35:19,475 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,476 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,476 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 07:35:51] 2026-01-26 06:35:19,476 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 07:35:51] 2026-01-26 06:35:19,476 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6983328305/payload.stdout) since it has not been created yet
[2026-01-26 07:35:51] 2026-01-26 06:35:19,476 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 07:35:51] 2026-01-26 06:35:19,487 | INFO     | sufficient remaining disk space (377901547520 B)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,487 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 07:35:51] 2026-01-26 06:35:19,487 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6983328305/HITS.48318034._001281.pool.root.1 since it does not exist
[2026-01-26 07:35:51] 2026-01-26 06:35:19,538 | INFO     | number of running child processes to parent process 3998386: 1
[2026-01-26 07:35:51] 2026-01-26 06:35:19,539 | INFO     | maximum number of monitored processes: 6
[2026-01-26 07:35:51] 2026-01-26 06:35:19,539 | INFO     | aborting job monitoring since job object (job id=6983328305) has expired
[2026-01-26 07:35:51] 2026-01-26 06:35:19,837 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 07:35:51] 2026-01-26 06:35:19,850 | INFO     | sufficient remaining disk space (377901547520 B)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | INFO     | update_server=False
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:35:51] 2026-01-26 06:35:19,851 | INFO     | will abort loop
[2026-01-26 07:35:51] 2026-01-26 06:35:20,131 | INFO     | all data control threads have been joined
[2026-01-26 07:35:51] 2026-01-26 06:35:20,330 | INFO     | all job control threads have been joined
[2026-01-26 07:35:51] 2026-01-26 06:35:20,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 07:35:51] 2026-01-26 06:35:20,856 | INFO     | [job] retrieve thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:20,857 | INFO     | [job] queue monitor thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:20,857 | INFO     | [job] job monitor thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:20,882 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:20,925 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:21,027 | INFO     | [data] copytool_in thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:21,106 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:21,137 | INFO     | [data] control thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:21,154 | INFO     | all payload control threads have been joined
[2026-01-26 07:35:51] 2026-01-26 06:35:21,336 | INFO     | [job] control thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:21,534 | INFO     | [payload] validate_post thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:22,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 07:35:51] 2026-01-26 06:35:22,159 | INFO     | [payload] control thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:22,190 | INFO     | [payload] failed_post thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:22,236 | INFO     | [job] validate thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:22,590 | INFO     | [data] copytool_out thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:26,062 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:30,597 | INFO     | job.realtimelogging is not enabled
[2026-01-26 07:35:51] 2026-01-26 06:35:31,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 07:35:51] 2026-01-26 06:35:39,167 | INFO     | [monitor] cgroup control has ended
[2026-01-26 07:35:51] 2026-01-26 06:35:40,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668441069376)>', '<ExcThread(monitor, started 140667795781376)>']
[2026-01-26 07:35:51] 2026-01-26 06:35:45,692 | INFO     | all workflow threads have been joined
[2026-01-26 07:35:51] 2026-01-26 06:35:45,693 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 07:35:51] 2026-01-26 06:35:45,693 | INFO     | traces error code: 0
[2026-01-26 07:35:51] 2026-01-26 06:35:45,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 07:35:51] 2026-01-26 06:35:50,920 | INFO     | PID=3993940 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 07:35:51] 2026-01-26 06:35:50,921 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 07:35:51] 2026-01-26 06:35:50,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 07:35:51] 2026-01-26 06:35:50,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 07:35:51] 2026-01-26 06:35:50,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 07:35:51] 2026-01-26 06:35:50,921 | INFO     | [monitor] control thread has ended
[2026-01-26 07:35:51] 2026-01-26 06:35:50,969 [wrapper] ==== pilot stdout END ====
[2026-01-26 07:35:51] 2026-01-26 06:35:50,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 07:35:51] 2026-01-26 06:35:50,974 [wrapper] pilotpid: 3993940
[2026-01-26 07:35:51] 2026-01-26 06:35:50,976 [wrapper] Pilot exit status: 0
[2026-01-26 07:35:51] 2026-01-26 06:35:50,984 [wrapper] pandaids: 6983328305
[2026-01-26 07:35:51] 2026-01-26 06:35:51,003 [wrapper] cleanup supervisor_pilot 4007730 3993941
[2026-01-26 07:35:51] 2026-01-26 06:35:51,006 [wrapper] Test setup, not cleaning
[2026-01-26 07:35:51] 2026-01-26 06:35:51,008 [wrapper] apfmon messages muted
[2026-01-26 07:35:51] 2026-01-26 06:35:51,011 [wrapper] ==== wrapper stdout END ====
[2026-01-26 07:35:51] 2026-01-26 06:35:51,013 [wrapper] ==== wrapper stderr END ====
[2026-01-26 07:35:51]  *** Error codes and diagnostics ***
[2026-01-26 07:35:51]     "exeErrorCode": 0,
[2026-01-26 07:35:51]     "exeErrorDiag": "",
[2026-01-26 07:35:51]     "pilotErrorCode": 0,
[2026-01-26 07:35:51]     "pilotErrorDiag": "",
[2026-01-26 07:35:51]  *** Listing of results directory ***
[2026-01-26 07:35:51] total 677228
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-26 07:35:51] -rwx------ 1 boinc boinc     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc      5111 Jan 25 19:51 queuedata.json
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc       100 Jan 26 06:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 07:35:51] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 06:08 run_atlas
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc       105 Jan 26 06:08 job.xml
[2026-01-26 07:35:51] -rw-r--r-- 2 boinc boinc 501300402 Jan 26 06:08 EVNT.48318032._000026.pool.root.1
[2026-01-26 07:35:51] -rw-r--r-- 2 boinc boinc    597764 Jan 26 06:08 input.tar.gz
[2026-01-26 07:35:51] -rw-r--r-- 2 boinc boinc     15845 Jan 26 06:08 start_atlas.sh
[2026-01-26 07:35:51] drwxrwx--x 2 boinc boinc      4096 Jan 26 06:08 shared
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc         0 Jan 26 06:08 boinc_setup_complete
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc      6449 Jan 26 06:08 init_data.xml
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc         0 Jan 26 06:08 boinc_lockfile
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc      2533 Jan 26 06:08 pandaJob.out
[2026-01-26 07:35:51] -rw------- 1 boinc boinc   1004246 Jan 26 06:08 agis_schedconf.cvmfs.json
[2026-01-26 07:35:51] -rw------- 1 boinc boinc   1516246 Jan 26 06:08 agis_ddmendpoints.agis.ALL.json
[2026-01-26 07:35:51] -rw------- 1 boinc boinc       427 Jan 26 06:08 workernode_map.json
[2026-01-26 07:35:51] drwx------ 5 boinc boinc      4096 Jan 26 06:08 pilot3
[2026-01-26 07:35:51] -rw------- 1 boinc boinc 186171002 Jan 26 07:34 HITS.48318034._001281.pool.root.1
[2026-01-26 07:35:51] -rw------- 1 boinc boinc        95 Jan 26 07:35 pilot_heartbeat.json
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc       530 Jan 26 07:35 boinc_task_state.xml
[2026-01-26 07:35:51] -rw------- 1 boinc boinc      1013 Jan 26 07:35 memory_monitor_summary.json
[2026-01-26 07:35:51] -rw------- 1 boinc boinc    277654 Jan 26 07:35 log.48318034._001281.job.log.tgz.1
[2026-01-26 07:35:51] -rw------- 1 boinc boinc      6300 Jan 26 07:35 heartbeat.json
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc      8192 Jan 26 07:35 boinc_mmap_file
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc        27 Jan 26 07:35 wrapper_checkpoint.txt
[2026-01-26 07:35:51] -rw------- 1 boinc boinc       747 Jan 26 07:35 pilotlog.txt
[2026-01-26 07:35:51] -rw------- 1 boinc boinc    759350 Jan 26 07:35 log.48318034._001281.job.log.1
[2026-01-26 07:35:51] -rw------- 1 boinc boinc       357 Jan 26 07:35 output.list
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc       620 Jan 26 07:35 runtime_log
[2026-01-26 07:35:51] -rw------- 1 boinc boinc   1054720 Jan 26 07:35 result.tar.gz
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc      8916 Jan 26 07:35 runtime_log.err
[2026-01-26 07:35:51] -rw------- 1 boinc boinc       661 Jan 26 07:35 RYfNDmFMK48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN97KDmJBqAHo.diag
[2026-01-26 07:35:51] -rw-r--r-- 1 boinc boinc     22132 Jan 26 07:35 stderr.txt
[2026-01-26 07:35:51] HITS file was successfully produced:
[2026-01-26 07:35:51] -rw------- 1 boinc boinc 186171002 Jan 26 07:34 shared/HITS.pool.root.1
[2026-01-26 07:35:51]  *** Contents of shared directory: ***
[2026-01-26 07:35:51] total 673000
[2026-01-26 07:35:51] -rw-r--r-- 2 boinc boinc 501300402 Jan 26 06:08 ATLAS.root_0
[2026-01-26 07:35:51] -rw-r--r-- 2 boinc boinc    597764 Jan 26 06:08 input.tar.gz
[2026-01-26 07:35:51] -rw-r--r-- 2 boinc boinc     15845 Jan 26 06:08 start_atlas.sh
[2026-01-26 07:35:51] -rw------- 1 boinc boinc 186171002 Jan 26 07:34 HITS.pool.root.1
[2026-01-26 07:35:51] -rw------- 1 boinc boinc   1054720 Jan 26 07:35 result.tar.gz
07:35:52 (3989891): run_atlas exited; CPU time 14971.039859
07:35:52 (3989891): called boinc_finish(0)

</stderr_txt>
]]>

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