Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:30 (24484): wrapper (7.7.26015): starting
17:31:30 (24484): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 17:31:30] Arguments: --nthreads 8
[2026-01-25 17:31:30] Threads: 8
[2026-01-25 17:31:30] Checking for CVMFS
[2026-01-25 17:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 17:31:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 17:31:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 17:31:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 17:31:31] 2.11.2.0 2860 152717 84972 155523 0 49 11230873 20275201 1 130560 0 38614285 99.819 10333366 30722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 17:31:31] CVMFS is ok
[2026-01-25 17:31:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 17:31:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 17:31:31] Further information can be found at the LHC@home message board.
[2026-01-25 17:31:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 17:31:31] Checking for apptainer binary...
[2026-01-25 17:31:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 17:31:31] Running /usr/bin/apptainer --version
[2026-01-25 17:31:31] apptainer version 1.3.2-1.el7
[2026-01-25 17:31:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 17:31:32] c-204-9.aglt2.org
[2026-01-25 17:31:32] apptainer works
[2026-01-25 17:31:32] Set ATHENA_PROC_NUMBER=8
[2026-01-25 17:31:32] Set ATHENA_CORE_NUMBER=8
[2026-01-25 17:31:32] Starting ATLAS job with PandaID=6983327301
[2026-01-25 17:31:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 19:38:39]  *** The last 200 lines of the pilot log: ***
[2026-01-25 19:38:39] 2026-01-26 00:38:05,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 19:38:39] 2026-01-26 00:38:05,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 19:38:39] 2026-01-26 00:38:05,870 | INFO     | fitting pss+swap vs Time
[2026-01-25 19:38:39] 2026-01-26 00:38:05,870 | INFO     | sum of square deviations: 591173875.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,871 | INFO     | sum of deviations: -1578370181.0000012
[2026-01-25 19:38:39] 2026-01-26 00:38:05,871 | INFO     | mean x: 1769384095.5
[2026-01-25 19:38:39] 2026-01-26 00:38:05,871 | INFO     | mean y: 2539246.9838709678
[2026-01-25 19:38:39] 2026-01-26 00:38:05,871 | INFO     | intersect: 4726603034.601107
[2026-01-25 19:38:39] 2026-01-26 00:38:05,872 | INFO     | chi2: 1.6253943722113835
[2026-01-25 19:38:39] 2026-01-26 00:38:05,872 | INFO     | sum of square deviations: 522502820.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,872 | INFO     | sum of deviations: -1073802398.0000024
[2026-01-25 19:38:39] 2026-01-26 00:38:05,873 | INFO     | mean x: 1769383943.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,873 | INFO     | mean y: 2540367.7394957985
[2026-01-25 19:38:39] 2026-01-26 00:38:05,873 | INFO     | intersect: 3638824514.447258
[2026-01-25 19:38:39] 2026-01-26 00:38:05,873 | INFO     | chi2: 1.6268268151307508
[2026-01-25 19:38:39] 2026-01-26 00:38:05,873 | INFO     | current chi2=1.6268268151307508 (change=-0.0881289454336189 %)
[2026-01-25 19:38:39] 2026-01-26 00:38:05,873 | INFO     | right removable region: 118
[2026-01-25 19:38:39] 2026-01-26 00:38:05,874 | INFO     | sum of square deviations: 522502820.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,874 | INFO     | sum of deviations: -20321857443.999996
[2026-01-25 19:38:39] 2026-01-26 00:38:05,874 | INFO     | mean x: 1769384248.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,874 | INFO     | mean y: 2580104.8403361347
[2026-01-25 19:38:39] 2026-01-26 00:38:05,875 | INFO     | intersect: 68819767448.47063
[2026-01-25 19:38:39] 2026-01-26 00:38:05,875 | INFO     | chi2: 0.13856001528060016
[2026-01-25 19:38:39] 2026-01-26 00:38:05,875 | INFO     | current chi2=0.13856001528060016 (change=91.47529869368957 %)
[2026-01-25 19:38:39] 2026-01-26 00:38:05,875 | INFO     | sum of square deviations: 459366752.5
[2026-01-25 19:38:39] 2026-01-26 00:38:05,876 | INFO     | sum of deviations: -19995855754.000004
[2026-01-25 19:38:39] 2026-01-26 00:38:05,876 | INFO     | mean x: 1769384400.5
[2026-01-25 19:38:39] 2026-01-26 00:38:05,876 | INFO     | mean y: 2579178.0701754387
[2026-01-25 19:38:39] 2026-01-26 00:38:05,876 | INFO     | intersect: 77022422371.39264
[2026-01-25 19:38:39] 2026-01-26 00:38:05,876 | INFO     | chi2: 0.11255749171084592
[2026-01-25 19:38:39] 2026-01-26 00:38:05,876 | INFO     | current chi2=0.11255749171084592 (change=18.766253393589853 %)
[2026-01-25 19:38:39] 2026-01-26 00:38:05,877 | INFO     | left removable region: 20
[2026-01-25 19:38:39] 2026-01-26 00:38:05,877 | INFO     | sum of square deviations: 291817564.5
[2026-01-25 19:38:39] 2026-01-26 00:38:05,877 | INFO     | sum of deviations: -12493036924.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,877 | INFO     | mean x: 1769384522.5
[2026-01-25 19:38:39] 2026-01-26 00:38:05,878 | INFO     | mean y: 2563861.0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,878 | INFO     | intersect: 75751897902.01729
[2026-01-25 19:38:39] 2026-01-26 00:38:05,878 | INFO     | chi2: 0.1015375099902607
[2026-01-25 19:38:39] 2026-01-26 00:38:05,878 | INFO     | current memory leak: -42.81 B/s (using 98 data points, chi2=0.10)
[2026-01-25 19:38:39] 2026-01-26 00:38:05,878 | INFO     | could have reported an average CPU frequency of 1695 MHz (8 samples)
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | ..............................
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . Timing measurements:
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . get job = 0 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . initial setup = 8 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . payload setup = 8 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . stage-in = 0 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . payload execution = 7539 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . stage-out = 0 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,879 | INFO     | . log creation = 0 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,880 | INFO     | ..............................
[2026-01-25 19:38:39] 2026-01-26 00:38:05,971 | INFO     | 
[2026-01-25 19:38:39] 2026-01-26 00:38:05,971 | INFO     | job summary report
[2026-01-25 19:38:39] 2026-01-26 00:38:05,971 | INFO     | --------------------------------------------------
[2026-01-25 19:38:39] 2026-01-26 00:38:05,971 | INFO     | PanDA job id: 6983327301
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | task id: 48318034
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | errors: (none)
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | pilot state: finished 
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | transexitcode: 0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | exeerrorcode: 0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | exeerrordiag: 
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | exitcode: 0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,972 | INFO     | exitmsg: OK
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | cpuconsumptiontime: 55765 s
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | nevents: 400
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | neventsw: 0
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | pid: 512
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | pgrp: 512
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | corecount: 8
[2026-01-25 19:38:39] 2026-01-26 00:38:05,973 | INFO     | event service: False
[2026-01-25 19:38:39] 2026-01-26 00:38:05,974 | INFO     | sizes: {0: 2283991, 1: 2284197, 11: 2284225, 7551: 2311758, 7552: 2320756, 7555: 2320812, 7556: 2321134}
[2026-01-25 19:38:39] 2026-01-26 00:38:05,974 | INFO     | --------------------------------------------------
[2026-01-25 19:38:39] 2026-01-26 00:38:05,974 | INFO     | 
[2026-01-25 19:38:39] 2026-01-26 00:38:05,974 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 19:38:39] 2026-01-26 00:38:06,001 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,002 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,002 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,002 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 19:38:39] 2026-01-26 00:38:06,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 19:38:39] 2026-01-26 00:38:06,005 | INFO     | job 6983327301 has completed (purged errors)
[2026-01-25 19:38:39] 2026-01-26 00:38:06,005 | INFO     | overall cleanup function is called
[2026-01-25 19:38:39] 2026-01-26 00:38:06,165 | WARNING  | process 512 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 19:38:39] 2026-01-26 00:38:06,302 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 19:38:39] 2026-01-26 00:38:06,303 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 19:38:39] 2026-01-26 00:38:06,304 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-25 19:38:39] 2026-01-26 00:38:06,304 | WARNING  | maxPSS not found in memory monitor output
[2026-01-25 19:38:39] 2026-01-26 00:38:06,304 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6983327301/payload.stdout) since it has not been created yet
[2026-01-25 19:38:39] 2026-01-26 00:38:06,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 19:38:39] 2026-01-26 00:38:06,326 | INFO     | sufficient remaining disk space (18017681408 B)
[2026-01-25 19:38:39] 2026-01-26 00:38:06,326 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-25 19:38:39] 2026-01-26 00:38:06,327 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983327301/HITS.48318034._000926.pool.root.1 since it does not exist
[2026-01-25 19:38:39] 2026-01-26 00:38:06,458 | INFO     | PID=28533 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 19:38:39] 2026-01-26 00:38:06,491 | INFO     | number of running child processes to parent process 512: 1
[2026-01-25 19:38:39] 2026-01-26 00:38:06,491 | INFO     | maximum number of monitored processes: 6
[2026-01-25 19:38:39] 2026-01-26 00:38:06,492 | INFO     | aborting job monitoring since job object (job id=6983327301) has expired
[2026-01-25 19:38:39] 2026-01-26 00:38:07,014 | INFO     | --- collectZombieJob: --- 10, [512]
[2026-01-25 19:38:39] 2026-01-26 00:38:07,014 | INFO     | zombie collector waiting for pid 512
[2026-01-25 19:38:39] 2026-01-26 00:38:07,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 19:38:39] 2026-01-26 00:38:07,015 | INFO     | collected zombie processes
[2026-01-25 19:38:39] 2026-01-26 00:38:07,015 | INFO     | will attempt to kill all subprocesses of pid=512
[2026-01-25 19:38:39] 2026-01-26 00:38:07,103 | INFO     | process IDs to be killed: [512] (in reverse order)
[2026-01-25 19:38:39] 2026-01-26 00:38:07,166 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 19:38:39] 2026-01-26 00:38:07,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 19:38:39] 2026-01-26 00:38:07,171 | INFO     | did not find any defunct processes belonging to 512
[2026-01-25 19:38:39] 2026-01-26 00:38:07,174 | INFO     | did not find any defunct processes belonging to 512
[2026-01-25 19:38:39] 2026-01-26 00:38:07,175 | INFO     | ready for new job
[2026-01-25 19:38:39] 2026-01-26 00:38:07,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 19:38:39] 2026-01-26 00:38:07,177 | INFO     | **************************************
[2026-01-25 19:38:39] 2026-01-26 00:38:07,177 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 19:38:39] 2026-01-26 00:38:07,177 | INFO     | **************************************
[2026-01-25 19:38:39] 2026-01-26 00:38:07,177 | INFO     | 
[2026-01-25 19:38:39] 2026-01-26 00:38:07,178 | INFO     | architecture information:
[2026-01-25 19:38:39] 2026-01-26 00:38:07,178 | INFO     | executing command: cat /etc/os-release
[2026-01-25 19:38:39] 2026-01-26 00:38:07,197 | INFO     | cat /etc/os-release:
[2026-01-25 19:38:39] NAME="CentOS Linux"
[2026-01-25 19:38:39] VERSION="7 (Core)"
[2026-01-25 19:38:39] ID="centos"
[2026-01-25 19:38:39] ID_LIKE="rhel fedora"
[2026-01-25 19:38:39] VERSION_ID="7"
[2026-01-25 19:38:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 19:38:39] ANSI_COLOR="0;31"
[2026-01-25 19:38:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 19:38:39] HOME_URL="https://www.centos.org/"
[2026-01-25 19:38:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 19:38:39] 
[2026-01-25 19:38:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 19:38:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 19:38:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 19:38:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 19:38:39] 
[2026-01-25 19:38:39] 2026-01-26 00:38:07,197 | INFO     | **************************************
[2026-01-25 19:38:39] 2026-01-26 00:38:07,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 19:38:39] 2026-01-26 00:38:07,721 | INFO     | sufficient remaining disk space (18018729984 B)
[2026-01-25 19:38:39] 2026-01-26 00:38:07,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 19:38:39] 2026-01-26 00:38:07,722 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 19:38:39] 2026-01-26 00:38:07,722 | INFO     | update_server=False
[2026-01-25 19:38:39] 2026-01-26 00:38:07,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 19:38:39] 2026-01-26 00:38:07,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 19:38:39] 2026-01-26 00:38:07,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 19:38:39] 2026-01-26 00:38:07,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 19:38:39] 2026-01-26 00:38:07,724 | INFO     | aborting loop
[2026-01-25 19:38:39] 2026-01-26 00:38:07,871 | INFO     | all payload control threads have been joined
[2026-01-25 19:38:39] 2026-01-26 00:38:07,899 | INFO     | all data control threads have been joined
[2026-01-25 19:38:39] 2026-01-26 00:38:08,728 | INFO     | [job] retrieve thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:08,728 | INFO     | [job] queue monitor thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:08,729 | INFO     | [job] job monitor thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:08,876 | INFO     | [payload] control thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:08,904 | INFO     | [data] control thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:08,933 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:08,938 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:09,197 | INFO     | [data] copytool_in thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:09,235 | INFO     | all job control threads have been joined
[2026-01-25 19:38:39] 2026-01-26 00:38:09,473 | INFO     | [job] validate thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:09,479 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:09,729 | INFO     | [data] copytool_out thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:10,005 | INFO     | [payload] validate_post thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:10,029 | INFO     | [payload] failed_post thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:10,104 | INFO     | [monitor] cgroup control has ended
[2026-01-25 19:38:39] 2026-01-26 00:38:10,237 | INFO     | [job] control thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:10,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 19:38:39] 2026-01-26 00:38:14,494 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:17,793 | INFO     | job.realtimelogging is not enabled
[2026-01-25 19:38:39] 2026-01-26 00:38:18,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 19:38:39] 2026-01-26 00:38:20,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957124134720)>', '<ExcThread(monitor, started 139956441822976)>']
[2026-01-25 19:38:39] 2026-01-26 00:38:25,407 | INFO     | all workflow threads have been joined
[2026-01-25 19:38:39] 2026-01-26 00:38:25,407 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 19:38:39] 2026-01-26 00:38:25,413 | INFO     | traces error code: 0
[2026-01-25 19:38:39] 2026-01-26 00:38:25,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 19:38:39] 2026-01-26 00:38:38,659 | INFO     | PID=28533 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 19:38:39] 2026-01-26 00:38:38,660 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 19:38:39] 2026-01-26 00:38:38,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 19:38:39] 2026-01-26 00:38:38,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 19:38:39] 2026-01-26 00:38:38,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 19:38:39] 2026-01-26 00:38:38,660 | CRITICAL | thread 'MainThread' is not alive
[2026-01-25 19:38:39] 2026-01-26 00:38:38,660 | INFO     | [monitor] control thread has ended
[2026-01-25 19:38:39] 2026-01-26 00:38:38,789 [wrapper] ==== pilot stdout END ====
[2026-01-25 19:38:39] 2026-01-26 00:38:38,794 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 19:38:39] 2026-01-26 00:38:38,799 [wrapper] pilotpid: 28533
[2026-01-25 19:38:39] 2026-01-26 00:38:38,804 [wrapper] Pilot exit status: 0
[2026-01-25 19:38:39] 2026-01-26 00:38:38,822 [wrapper] pandaids: 6983327301
[2026-01-25 19:38:39] 2026-01-26 00:38:38,864 [wrapper] cleanup supervisor_pilot 12798 28534
[2026-01-25 19:38:39] 2026-01-26 00:38:38,869 [wrapper] Test setup, not cleaning
[2026-01-25 19:38:39] 2026-01-26 00:38:38,873 [wrapper] apfmon messages muted
[2026-01-25 19:38:39] 2026-01-26 00:38:38,878 [wrapper] ==== wrapper stdout END ====
[2026-01-25 19:38:39] 2026-01-26 00:38:38,882 [wrapper] ==== wrapper stderr END ====
[2026-01-25 19:38:39]  *** Error codes and diagnostics ***
[2026-01-25 19:38:39]     "exeErrorCode": 0,
[2026-01-25 19:38:39]     "exeErrorDiag": "",
[2026-01-25 19:38:39]     "pilotErrorCode": 0,
[2026-01-25 19:38:39]     "pilotErrorDiag": "",
[2026-01-25 19:38:39]  *** Listing of results directory ***
[2026-01-25 19:38:39] total 672544
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 13:47 pilot3.tar.gz
[2026-01-25 19:38:39] -rwx------ 1 boincer umatlas     36322 Jan 25 13:49 runpilot2-wrapper.sh
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 13:50 queuedata.json
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas       100 Jan 25 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 19:38:39] -rwxr-xr-x 1 boincer umatlas      7986 Jan 25 17:31 run_atlas
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas       105 Jan 25 17:31 job.xml
[2026-01-25 19:38:39] -rw-r--r-- 2 boincer umatlas 499843913 Jan 25 17:31 EVNT.48318032._000019.pool.root.1
[2026-01-25 19:38:39] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 17:31 start_atlas.sh
[2026-01-25 19:38:39] drwxrwx--x 2 boincer umatlas      4096 Jan 25 17:31 shared
[2026-01-25 19:38:39] -rw-r--r-- 2 boincer umatlas    597760 Jan 25 17:31 input.tar.gz
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas         0 Jan 25 17:31 boinc_lockfile
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas      2531 Jan 25 17:31 pandaJob.out
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas        57 Jan 25 17:31 setup.sh.local
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas   1004254 Jan 25 17:31 agis_schedconf.cvmfs.json
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas   1516246 Jan 25 17:31 agis_ddmendpoints.agis.ALL.json
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas       431 Jan 25 17:31 workernode_map.json
[2026-01-25 19:38:39] drwx------ 5 boincer umatlas      4096 Jan 25 17:31 pilot3
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas      5909 Jan 25 19:36 init_data.xml
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas 181991563 Jan 25 19:37 HITS.48318034._000926.pool.root.1
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas       530 Jan 25 19:37 boinc_task_state.xml
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas        95 Jan 25 19:37 pilot_heartbeat.json
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas      1048 Jan 25 19:37 memory_monitor_summary.json
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas    383699 Jan 25 19:38 log.48318034._000926.job.log.tgz.1
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas      6400 Jan 25 19:38 heartbeat.json
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas      8192 Jan 25 19:38 boinc_mmap_file
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas        27 Jan 25 19:38 wrapper_checkpoint.txt
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas       815 Jan 25 19:38 pilotlog.txt
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas   1068433 Jan 25 19:38 log.48318034._000926.job.log.1
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas       357 Jan 25 19:38 output.list
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas       620 Jan 25 19:38 runtime_log
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas   1474560 Jan 25 19:38 result.tar.gz
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas      9336 Jan 25 19:38 runtime_log.err
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas       657 Jan 25 19:38 nwiKDmwLK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOV1KDmWD0KFm.diag
[2026-01-25 19:38:39] -rw-r--r-- 1 boincer umatlas     21511 Jan 25 19:38 stderr.txt
[2026-01-25 19:38:39] HITS file was successfully produced:
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas 181991563 Jan 25 19:37 shared/HITS.pool.root.1
[2026-01-25 19:38:39]  *** Contents of shared directory: ***
[2026-01-25 19:38:39] total 667908
[2026-01-25 19:38:39] -rw-r--r-- 2 boincer umatlas 499843913 Jan 25 17:31 ATLAS.root_0
[2026-01-25 19:38:39] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 17:31 start_atlas.sh
[2026-01-25 19:38:39] -rw-r--r-- 2 boincer umatlas    597760 Jan 25 17:31 input.tar.gz
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas 181991563 Jan 25 19:37 HITS.pool.root.1
[2026-01-25 19:38:39] -rw------- 1 boincer umatlas   1474560 Jan 25 19:38 result.tar.gz
19:38:40 (24484): run_atlas exited; CPU time 55718.208490
19:38:40 (24484): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN