Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:02:27 (2867294): wrapper (7.7.26015): starting
13:02:27 (2867294): wrapper: running run_atlas (--nthreads 6)
[2026-01-26 13:02:27] Arguments: --nthreads 6
[2026-01-26 13:02:27] Threads: 6
[2026-01-26 13:02:27] Checking for CVMFS
[2026-01-26 13:02:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:02:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:02:47] 2.13.3.0 2690938 354 56824 155530 1 188 48490630 52428801 1858 130560 0 583899 99.996 13592 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-26 13:02:47] CVMFS is ok
[2026-01-26 13:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:02:47] Checking for apptainer binary...
[2026-01-26 13:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:02:47] Running /usr/bin/apptainer --version
[2026-01-26 13:02:47] apptainer version 1.4.5-2.el9
[2026-01-26 13:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:02:47] testio008
[2026-01-26 13:02:47] apptainer works
[2026-01-26 13:02:47] Set ATHENA_PROC_NUMBER=6
[2026-01-26 13:02:47] Set ATHENA_CORE_NUMBER=6
[2026-01-26 13:02:47] Starting ATLAS job with PandaID=6982374202
[2026-01-26 13:02:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:13:04]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:13:04]  is_altstaged=None
[2026-01-26 14:13:04]  is_tar=False
[2026-01-26 14:13:04]  lfn=log.48310724._004406.job.log.tgz.1
[2026-01-26 14:13:04]  mtime=0
[2026-01-26 14:13:04]  protocol_id=None
[2026-01-26 14:13:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 14:13:04]  replicas=None
[2026-01-26 14:13:04]  scope=mc23_13p6TeV
[2026-01-26 14:13:04]  status=None
[2026-01-26 14:13:04]  status_code=0
[2026-01-26 14:13:04]  storage_token=
[2026-01-26 14:13:04]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6982374202/log.48310724._004406.job.log.tgz.1
[2026-01-26 14:13:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/95/log.48310724._004406.job.log.tgz.1
[2026-01-26 14:13:04]  workdir=None
[2026-01-26 14:13:04] ]
[2026-01-26 14:13:04] 2026-01-26 05:11:54,630 | INFO     | transferring file log.48310724._004406.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6982374202/log.48310724._004406.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-26 14:13:04] 2026-01-26 05:11:54,630 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6982374202/log.48310724._004406.job.log.tgz.1 /var/lib/boinc/slots/2/log.48310724._004406.job
[2026-01-26 14:13:04] 2026-01-26 05:11:54,639 | INFO     | adding to output.list: log.48310724._004406.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/95/log.48310724._004406.job.log.tg
[2026-01-26 14:13:04] 2026-01-26 05:11:54,639 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 14:13:04] 2026-01-26 05:11:54,639 | INFO     | summary of transferred files:
[2026-01-26 14:13:04] 2026-01-26 05:11:54,639 | INFO     |  -- lfn=log.48310724._004406.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 14:13:04] 2026-01-26 05:11:54,639 | INFO     | stage-out finished correctly
[2026-01-26 14:13:04] 2026-01-26 05:11:54,956 | INFO     | time since job start (4083s) is within the limit (349056.0s)
[2026-01-26 14:13:04] 2026-01-26 05:11:56,354 | INFO     | monitor loop #310: job 0:6982374202 is in state 'finished'
[2026-01-26 14:13:04] 2026-01-26 05:11:56,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 14:13:04] 2026-01-26 05:11:56,961 | INFO     | time since job start (4085s) is within the limit (349056.0s)
[2026-01-26 14:13:04] 2026-01-26 05:11:57,598 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 14:13:04] 2026-01-26 05:11:58,856 | INFO     | monitor loop #311: job 0:6982374202 is in state 'finished'
[2026-01-26 14:13:04] 2026-01-26 05:11:58,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 14:13:04] 2026-01-26 05:11:58,965 | INFO     | time since job start (4087s) is within the limit (349056.0s)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,883 | INFO     | job 6982374202 has state=finished
[2026-01-26 14:13:04] 2026-01-26 05:11:59,883 | INFO     | preparing for final server update for job 6982374202 in state='finished'
[2026-01-26 14:13:04] 2026-01-26 05:11:59,883 | INFO     | reading metadata from: /var/lib/boinc/slots/2/PanDA_Pilot-6982374202/jobReport.json
[2026-01-26 14:13:04] 2026-01-26 05:11:59,885 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/2/workernode_map.json
[2026-01-26 14:13:04] 2026-01-26 05:11:59,886 | INFO     | this job has now completed (state=finished)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,886 | INFO     | log transfer has been attempted: DONE
[2026-01-26 14:13:04] 2026-01-26 05:11:59,886 | INFO     | job 6982374202 has finished - writing final server update
[2026-01-26 14:13:04] 2026-01-26 05:11:59,886 | INFO     | total number of processed events: 400 (read)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,890 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6982374202/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,890 | INFO     | extracted standard info from prmon json
[2026-01-26 14:13:04] 2026-01-26 05:11:59,890 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:13:04] 2026-01-26 05:11:59,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:13:04] 2026-01-26 05:11:59,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:13:04] 2026-01-26 05:11:59,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:13:04] 2026-01-26 05:11:59,892 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:13:04] 2026-01-26 05:11:59,892 | INFO     | sum of square deviations: 66959395.0
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | sum of deviations: 101422748.00000006
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | mean x: 1769402352.5
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | mean y: 2449094.533333333
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | intersect: -2677647535.793371
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | chi2: 0.006202846849699576
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | current memory leak: 1.51 B/s (using 60 data points, chi2=0.01)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | could have reported an average CPU frequency of 1999 MHz (6 samples)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,893 | INFO     | ..............................
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . Timing measurements:
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . get job = 0 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . initial setup = 6 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . payload setup = 2 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . stage-in = 0 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . payload execution = 4065 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . stage-out = 0 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | . log creation = 0 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,894 | INFO     | ..............................
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | 
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | job summary report
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | --------------------------------------------------
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | PanDA job id: 6982374202
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | task id: 48310724
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | errors: (none)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | pilot state: finished 
[2026-01-26 14:13:04] 2026-01-26 05:11:59,976 | INFO     | transexitcode: 0
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | exeerrorcode: 0
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | exeerrordiag: 
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | exitcode: 0
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | exitmsg: OK
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | cpuconsumptiontime: 22545 s
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | nevents: 400
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | neventsw: 0
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | pid: 2876038
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | pgrp: 2876038
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | corecount: 6
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | event service: False
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | sizes: {0: 2284251, 11: 2284251, 4070: 2310150, 4071: 2310149, 4072: 2319203, 4075: 2319259, 4077: 2319581}
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | --------------------------------------------------
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | 
[2026-01-26 14:13:04] 2026-01-26 05:11:59,977 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | job 6982374202 has completed (purged errors)
[2026-01-26 14:13:04] 2026-01-26 05:11:59,991 | INFO     | overall cleanup function is called
[2026-01-26 14:13:04] 2026-01-26 05:12:00,997 | INFO     | --- collectZombieJob: --- 10, [2876038]
[2026-01-26 14:13:04] 2026-01-26 05:12:00,997 | INFO     | zombie collector waiting for pid 2876038
[2026-01-26 14:13:04] 2026-01-26 05:12:00,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:13:04] 2026-01-26 05:12:00,997 | INFO     | collected zombie processes
[2026-01-26 14:13:04] 2026-01-26 05:12:00,997 | INFO     | will attempt to kill all subprocesses of pid=2876038
[2026-01-26 14:13:04] 2026-01-26 05:12:01,030 | INFO     | process IDs to be killed: [2876038] (in reverse order)
[2026-01-26 14:13:04] 2026-01-26 05:12:01,047 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:13:04] 2026-01-26 05:12:01,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:13:04] 2026-01-26 05:12:01,049 | INFO     | did not find any defunct processes belonging to 2876038
[2026-01-26 14:13:04] 2026-01-26 05:12:01,050 | INFO     | did not find any defunct processes belonging to 2876038
[2026-01-26 14:13:04] 2026-01-26 05:12:01,050 | INFO     | ready for new job
[2026-01-26 14:13:04] 2026-01-26 05:12:01,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:13:04] 2026-01-26 05:12:01,051 | INFO     | **************************************
[2026-01-26 14:13:04] 2026-01-26 05:12:01,051 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:13:04] 2026-01-26 05:12:01,051 | INFO     | **************************************
[2026-01-26 14:13:04] 2026-01-26 05:12:01,051 | INFO     | 
[2026-01-26 14:13:04] 2026-01-26 05:12:01,052 | INFO     | architecture information:
[2026-01-26 14:13:04] 2026-01-26 05:12:01,052 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:13:04] 2026-01-26 05:12:01,058 | INFO     | cat /etc/os-release:
[2026-01-26 14:13:04] NAME="CentOS Linux"
[2026-01-26 14:13:04] VERSION="7 (Core)"
[2026-01-26 14:13:04] ID="centos"
[2026-01-26 14:13:04] ID_LIKE="rhel fedora"
[2026-01-26 14:13:04] VERSION_ID="7"
[2026-01-26 14:13:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:13:04] ANSI_COLOR="0;31"
[2026-01-26 14:13:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:13:04] HOME_URL="https://www.centos.org/"
[2026-01-26 14:13:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:13:04] 
[2026-01-26 14:13:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:13:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:13:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:13:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:13:04] 
[2026-01-26 14:13:04] 2026-01-26 05:12:01,058 | INFO     | **************************************
[2026-01-26 14:13:04] 2026-01-26 05:12:01,560 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-26 14:13:04] 2026-01-26 05:12:01,566 | INFO     | sufficient remaining disk space (277430140928 B)
[2026-01-26 14:13:04] 2026-01-26 05:12:01,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:13:04] 2026-01-26 05:12:01,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:13:04] 2026-01-26 05:12:01,567 | INFO     | update_server=False
[2026-01-26 14:13:04] 2026-01-26 05:12:01,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:13:04] 2026-01-26 05:12:01,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:13:04] 2026-01-26 05:12:01,651 | INFO     | all data control threads have been joined
[2026-01-26 14:13:04] 2026-01-26 05:12:02,213 | INFO     | all job control threads have been joined
[2026-01-26 14:13:04] 2026-01-26 05:12:02,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:13:04] 2026-01-26 05:12:02,364 | INFO     | aborting loop
[2026-01-26 14:13:04] 2026-01-26 05:12:02,572 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:02,572 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:02,656 | INFO     | [data] control thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:02,671 | INFO     | all payload control threads have been joined
[2026-01-26 14:13:04] 2026-01-26 05:12:02,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:13:04] 2026-01-26 05:12:02,723 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,017 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,154 | INFO     | [job] validate thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,182 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,218 | INFO     | [job] control thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,220 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,283 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,369 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,676 | INFO     | [payload] control thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:03,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:13:04] 2026-01-26 05:12:03,685 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:04,692 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:07,690 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:11,871 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:13:04] 2026-01-26 05:12:12,876 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:13:04] 2026-01-26 05:12:32,093 | INFO     | PID=2871435 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 14:13:04] 2026-01-26 05:12:32,094 | INFO     | .. there are 3 such processes running
[2026-01-26 14:13:04] 2026-01-26 05:12:32,094 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:13:04] 2026-01-26 05:12:32,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:13:04] 2026-01-26 05:12:32,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:13:04] 2026-01-26 05:12:58,278 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:13:04] 2026-01-26 05:12:59,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648757884736)>', '<ExcThread(monitor, started 139648395351808)>']
[2026-01-26 14:13:04] 2026-01-26 05:12:59,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:13:04] 2026-01-26 05:12:59,227 | INFO     | [monitor] control thread has ended
[2026-01-26 14:13:04] 2026-01-26 05:13:04,025 | INFO     | all workflow threads have been joined
[2026-01-26 14:13:04] 2026-01-26 05:13:04,025 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:13:04] 2026-01-26 05:13:04,025 | INFO     | traces error code: 0
[2026-01-26 14:13:04] 2026-01-26 05:13:04,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:13:04] 2026-01-26 05:13:04,076 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:13:04] 2026-01-26 05:13:04,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:13:04] 2026-01-26 05:13:04,078 [wrapper] pilotpid: 2871435
[2026-01-26 14:13:04] 2026-01-26 05:13:04,079 [wrapper] Pilot exit status: 0
[2026-01-26 14:13:04] 2026-01-26 05:13:04,083 [wrapper] pandaids: 6982374202
[2026-01-26 14:13:04] 2026-01-26 05:13:04,094 [wrapper] cleanup supervisor_pilot 2894163 2871436
[2026-01-26 14:13:04] 2026-01-26 05:13:04,095 [wrapper] Test setup, not cleaning
[2026-01-26 14:13:04] 2026-01-26 05:13:04,095 [wrapper] apfmon messages muted
[2026-01-26 14:13:04] 2026-01-26 05:13:04,096 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:13:04] 2026-01-26 05:13:04,097 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:13:04]  *** Error codes and diagnostics ***
[2026-01-26 14:13:04]     "exeErrorCode": 0,
[2026-01-26 14:13:04]     "exeErrorDiag": "",
[2026-01-26 14:13:04]     "pilotErrorCode": 0,
[2026-01-26 14:13:04]     "pilotErrorDiag": "",
[2026-01-26 14:13:04]  *** Listing of results directory ***
[2026-01-26 14:13:04] total 669968
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc    584422 Jan 25 11:18 pilot3.tar.gz
[2026-01-26 14:13:04] -rwx------. 1 boinc boinc     36322 Jan 25 11:22 runpilot2-wrapper.sh
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc      5111 Jan 25 11:24 queuedata.json
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc       100 Jan 26 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:13:04] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 13:02 run_atlas
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc       105 Jan 26 13:02 job.xml
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc      9526 Jan 26 13:02 init_data.xml
[2026-01-26 14:13:04] -rw-r--r--. 2 boinc boinc 496749068 Jan 26 13:02 EVNT.48310721._000089.pool.root.1
[2026-01-26 14:13:04] -rw-r--r--. 2 boinc boinc     15845 Jan 26 13:02 start_atlas.sh
[2026-01-26 14:13:04] drwxrwx--x. 2 boinc boinc        68 Jan 26 13:02 shared
[2026-01-26 14:13:04] -rw-r--r--. 2 boinc boinc    597767 Jan 26 13:02 input.tar.gz
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc         0 Jan 26 13:02 boinc_lockfile
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc      2533 Jan 26 13:02 pandaJob.out
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc   1004246 Jan 26 13:03 agis_schedconf.cvmfs.json
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc   1516246 Jan 26 13:03 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc       425 Jan 26 13:03 workernode_map.json
[2026-01-26 14:13:04] drwx------. 5 boinc boinc      4096 Jan 26 13:03 pilot3
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc 183583887 Jan 26 14:11 HITS.48310724._004406.pool.root.1
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc       530 Jan 26 14:11 boinc_task_state.xml
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc      1015 Jan 26 14:11 memory_monitor_summary.json
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc    278111 Jan 26 14:11 log.48310724._004406.job.log.tgz.1
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc        95 Jan 26 14:11 pilot_heartbeat.json
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc      6301 Jan 26 14:11 heartbeat.json
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc      8192 Jan 26 14:12 boinc_mmap_file
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc        27 Jan 26 14:12 wrapper_checkpoint.txt
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc      4892 Jan 26 14:13 pilotlog.txt
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc    612919 Jan 26 14:13 log.48310724._004406.job.log.1
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc       357 Jan 26 14:13 output.list
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc       620 Jan 26 14:13 runtime_log
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc    911360 Jan 26 14:13 result.tar.gz
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc      8774 Jan 26 14:13 runtime_log.err
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc       641 Jan 26 14:13 gpdMDmew438n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyrzKDm95WQJm.diag
[2026-01-26 14:13:04] -rw-r--r--. 1 boinc boinc     21164 Jan 26 14:13 stderr.txt
[2026-01-26 14:13:04] HITS file was successfully produced:
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc 183583887 Jan 26 14:11 shared/HITS.pool.root.1
[2026-01-26 14:13:04]  *** Contents of shared directory: ***
[2026-01-26 14:13:04] total 665884
[2026-01-26 14:13:04] -rw-r--r--. 2 boinc boinc 496749068 Jan 26 13:02 ATLAS.root_0
[2026-01-26 14:13:04] -rw-r--r--. 2 boinc boinc     15845 Jan 26 13:02 start_atlas.sh
[2026-01-26 14:13:04] -rw-r--r--. 2 boinc boinc    597767 Jan 26 13:02 input.tar.gz
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc 183583887 Jan 26 14:11 HITS.pool.root.1
[2026-01-26 14:13:04] -rw-------. 1 boinc boinc    911360 Jan 26 14:13 result.tar.gz
14:13:06 (2867294): run_atlas exited; CPU time 22579.129322
14:13:06 (2867294): called boinc_finish(0)

</stderr_txt>
]]>

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