Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:29:39 (713867): wrapper (7.7.26015): starting
13:29:39 (713867): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 13:29:39] Arguments: --nthreads 12
[2026-01-26 13:29:39] Threads: 12
[2026-01-26 13:29:39] Checking for CVMFS
[2026-01-26 13:29:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:29:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:29:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:29:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:29:44] 2.13.1.0 2787 1314 63688 155548 3 50 2071260 4096001 1824 130560 0 2101257 99.993 52732 807 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 13:29:44] CVMFS is ok
[2026-01-26 13:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:29:44] Checking for apptainer binary...
[2026-01-26 13:29:44] apptainer is not installed, using version from CVMFS
[2026-01-26 13:29:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:29:47] ryzen7
[2026-01-26 13:29:47] apptainer works
[2026-01-26 13:29:47] Set ATHENA_PROC_NUMBER=12
[2026-01-26 13:29:47] Set ATHENA_CORE_NUMBER=12
[2026-01-26 13:29:47] Starting ATLAS job with PandaID=6982977389
[2026-01-26 13:29:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:55:16]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:55:16]  is_tar=False
[2026-01-26 14:55:16]  lfn=log.48330013._000180.job.log.tgz.1
[2026-01-26 14:55:16]  mtime=0
[2026-01-26 14:55:16]  protocol_id=None
[2026-01-26 14:55:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 14:55:16]  replicas=None
[2026-01-26 14:55:16]  scope=mc23_13p6TeV
[2026-01-26 14:55:16]  status=None
[2026-01-26 14:55:16]  status_code=0
[2026-01-26 14:55:16]  storage_token=
[2026-01-26 14:55:16]  surl=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6982977389/log.48330013._000180.job.log.tgz.1
[2026-01-26 14:55:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/06/log.48330013._000180.job.log.tgz.1
[2026-01-26 14:55:16]  workdir=None
[2026-01-26 14:55:16] ]
[2026-01-26 14:55:16] 2026-01-26 14:54:21,798 | INFO     | transferring file log.48330013._000180.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6982977389/log.48330013._000180.job.log.tgz.1 t
[2026-01-26 14:55:16] 2026-01-26 14:54:21,798 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6982977389/log.48330013._000180.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 14:55:16] 2026-01-26 14:54:21,808 | INFO     | adding to output.list: log.48330013._000180.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/06/log.48330013._000180.job.log.tg
[2026-01-26 14:55:16] 2026-01-26 14:54:21,808 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 14:55:16] 2026-01-26 14:54:21,808 | INFO     | summary of transferred files:
[2026-01-26 14:55:16] 2026-01-26 14:54:21,809 | INFO     |  -- lfn=log.48330013._000180.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 14:55:16] 2026-01-26 14:54:21,809 | INFO     | stage-out finished correctly
[2026-01-26 14:55:16] 2026-01-26 14:54:22,046 | INFO     | time since job start (4939s) is within the limit (349056.0s)
[2026-01-26 14:55:16] 2026-01-26 14:54:24,050 | INFO     | time since job start (4941s) is within the limit (349056.0s)
[2026-01-26 14:55:16] 2026-01-26 14:54:25,266 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 14:55:16] 2026-01-26 14:54:26,056 | INFO     | time since job start (4943s) is within the limit (349056.0s)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,858 | INFO     | job 6982977389 has state=finished
[2026-01-26 14:55:16] 2026-01-26 14:54:26,858 | INFO     | preparing for final server update for job 6982977389 in state='finished'
[2026-01-26 14:55:16] 2026-01-26 14:54:26,858 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6982977389/jobReport.json
[2026-01-26 14:55:16] 2026-01-26 14:54:26,859 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/0/workernode_map.json
[2026-01-26 14:55:16] 2026-01-26 14:54:26,860 | INFO     | this job has now completed (state=finished)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,860 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,860 | INFO     | log transfer has been attempted: DONE
[2026-01-26 14:55:16] 2026-01-26 14:54:26,860 | INFO     | job 6982977389 has finished - writing final server update
[2026-01-26 14:55:16] 2026-01-26 14:54:26,860 | INFO     | total number of processed events: 400 (read)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,880 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6982977389/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,880 | INFO     | extracted standard info from prmon json
[2026-01-26 14:55:16] 2026-01-26 14:54:26,880 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:55:16] 2026-01-26 14:54:26,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:55:16] 2026-01-26 14:54:26,880 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:55:16] 2026-01-26 14:54:26,880 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:55:16] 2026-01-26 14:54:26,881 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:55:16] 2026-01-26 14:54:26,881 | INFO     | sum of square deviations: 120605052.0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | sum of deviations: -6184891626.0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | mean x: 1769436887.0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | mean y: 2769837.0547945206
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | intersect: 90743374842.07407
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | chi2: 0.013969188849552363
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | current memory leak: -51.28 B/s (using 73 data points, chi2=0.01)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | could have reported an average CPU frequency of 4304 MHz (6 samples)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | ..............................
[2026-01-26 14:55:16] 2026-01-26 14:54:26,882 | INFO     | . Timing measurements:
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . get job = 0 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . initial setup = 51 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . payload setup = 55 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . stage-in = 0 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . payload execution = 4878 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . stage-out = 0 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | . log creation = 0 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,883 | INFO     | ..............................
[2026-01-26 14:55:16] 2026-01-26 14:54:26,937 | INFO     | 
[2026-01-26 14:55:16] 2026-01-26 14:54:26,937 | INFO     | job summary report
[2026-01-26 14:55:16] 2026-01-26 14:54:26,937 | INFO     | --------------------------------------------------
[2026-01-26 14:55:16] 2026-01-26 14:54:26,937 | INFO     | PanDA job id: 6982977389
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | task id: 48330013
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | errors: (none)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | pilot state: finished 
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | transexitcode: 0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | exeerrorcode: 0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | exeerrordiag: 
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | exitcode: 0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | exitmsg: OK
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | cpuconsumptiontime: 27450 s
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | nevents: 400
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | neventsw: 0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | pid: 722461
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | pgrp: 722461
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | corecount: 12
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | event service: False
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | sizes: {0: 2283944, 1: 2284405, 4937: 2319826, 4941: 2319826, 4943: 2320020}
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | --------------------------------------------------
[2026-01-26 14:55:16] 2026-01-26 14:54:26,938 | INFO     | 
[2026-01-26 14:55:16] 2026-01-26 14:54:26,939 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-26 14:55:16] 2026-01-26 14:54:26,949 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,951 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:55:16] 2026-01-26 14:54:26,951 | INFO     | job 6982977389 has completed (purged errors)
[2026-01-26 14:55:16] 2026-01-26 14:54:26,951 | INFO     | overall cleanup function is called
[2026-01-26 14:55:16] 2026-01-26 14:54:27,461 | WARNING  | process 722461 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 14:55:16] 2026-01-26 14:54:27,510 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:55:16] 2026-01-26 14:54:27,575 | INFO     | number of running child processes to parent process 722461: 1
[2026-01-26 14:55:16] 2026-01-26 14:54:27,575 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:55:16] 2026-01-26 14:54:27,575 | INFO     | aborting job monitoring since job object (job id=6982977389) has expired
[2026-01-26 14:55:16] 2026-01-26 14:54:27,958 | INFO     | --- collectZombieJob: --- 10, [722461]
[2026-01-26 14:55:16] 2026-01-26 14:54:27,958 | INFO     | zombie collector waiting for pid 722461
[2026-01-26 14:55:16] 2026-01-26 14:54:27,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:55:16] 2026-01-26 14:54:27,958 | INFO     | collected zombie processes
[2026-01-26 14:55:16] 2026-01-26 14:54:27,958 | INFO     | will attempt to kill all subprocesses of pid=722461
[2026-01-26 14:55:16] 2026-01-26 14:54:28,023 | INFO     | process IDs to be killed: [722461] (in reverse order)
[2026-01-26 14:55:16] 2026-01-26 14:54:28,052 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:55:16] 2026-01-26 14:54:28,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:55:16] 2026-01-26 14:54:28,053 | INFO     | did not find any defunct processes belonging to 722461
[2026-01-26 14:55:16] 2026-01-26 14:54:28,055 | INFO     | did not find any defunct processes belonging to 722461
[2026-01-26 14:55:16] 2026-01-26 14:54:28,055 | INFO     | ready for new job
[2026-01-26 14:55:16] 2026-01-26 14:54:28,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:55:16] 2026-01-26 14:54:28,056 | INFO     | **************************************
[2026-01-26 14:55:16] 2026-01-26 14:54:28,056 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:55:16] 2026-01-26 14:54:28,056 | INFO     | **************************************
[2026-01-26 14:55:16] 2026-01-26 14:54:28,056 | INFO     | 
[2026-01-26 14:55:16] 2026-01-26 14:54:28,074 | INFO     | architecture information:
[2026-01-26 14:55:16] 2026-01-26 14:54:28,074 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:55:16] 2026-01-26 14:54:28,081 | INFO     | cat /etc/os-release:
[2026-01-26 14:55:16] NAME="CentOS Linux"
[2026-01-26 14:55:16] VERSION="7 (Core)"
[2026-01-26 14:55:16] ID="centos"
[2026-01-26 14:55:16] ID_LIKE="rhel fedora"
[2026-01-26 14:55:16] VERSION_ID="7"
[2026-01-26 14:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:55:16] ANSI_COLOR="0;31"
[2026-01-26 14:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:55:16] HOME_URL="https://www.centos.org/"
[2026-01-26 14:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:55:16] 
[2026-01-26 14:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:55:16] 
[2026-01-26 14:55:16] 2026-01-26 14:54:28,082 | INFO     | **************************************
[2026-01-26 14:55:16] 2026-01-26 14:54:28,584 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-26 14:55:16] 2026-01-26 14:54:28,592 | INFO     | sufficient remaining disk space (164604411904 B)
[2026-01-26 14:55:16] 2026-01-26 14:54:28,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:55:16] 2026-01-26 14:54:28,592 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:55:16] 2026-01-26 14:54:28,592 | INFO     | update_server=False
[2026-01-26 14:55:16] 2026-01-26 14:54:28,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:55:16] 2026-01-26 14:54:28,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:55:16] 2026-01-26 14:54:28,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:55:16] 2026-01-26 14:54:28,593 | INFO     | aborting loop
[2026-01-26 14:55:16] 2026-01-26 14:54:29,028 | INFO     | all payload control threads have been joined
[2026-01-26 14:55:16] 2026-01-26 14:54:29,562 | INFO     | all data control threads have been joined
[2026-01-26 14:55:16] 2026-01-26 14:54:29,598 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:29,598 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:29,598 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:29,674 | INFO     | all job control threads have been joined
[2026-01-26 14:55:16] 2026-01-26 14:54:29,694 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:29,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:55:16] 2026-01-26 14:54:29,870 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,030 | INFO     | [payload] control thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,221 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,350 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,423 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,424 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,566 | INFO     | [data] control thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,678 | INFO     | [job] control thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:30,966 | INFO     | [job] validate thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:31,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:55:16] 2026-01-26 14:54:31,870 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:35,330 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:38,818 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:55:16] 2026-01-26 14:54:39,822 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:55:16] 2026-01-26 14:54:59,200 | INFO     | PID=717968 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 14:55:16] 2026-01-26 14:54:59,200 | INFO     | .. there are 3 such processes running
[2026-01-26 14:55:16] 2026-01-26 14:54:59,200 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:55:16] 2026-01-26 14:54:59,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:55:16] 2026-01-26 14:54:59,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:55:16] 2026-01-26 14:55:10,886 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:55:16] 2026-01-26 14:55:11,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312710895424)>', '<ExcThread(monitor, started 140312269805312)>']
[2026-01-26 14:55:16] 2026-01-26 14:55:12,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:55:16] 2026-01-26 14:55:12,250 | INFO     | [monitor] control thread has ended
[2026-01-26 14:55:16] 2026-01-26 14:55:16,653 | INFO     | all workflow threads have been joined
[2026-01-26 14:55:16] 2026-01-26 14:55:16,653 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:55:16] 2026-01-26 14:55:16,654 | INFO     | traces error code: 0
[2026-01-26 14:55:16] 2026-01-26 14:55:16,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:55:16] 2026-01-26 14:55:16,702 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:55:16] 2026-01-26 14:55:16,703 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:55:16] 2026-01-26 14:55:16,704 [wrapper] pilotpid: 717968
[2026-01-26 14:55:16] 2026-01-26 14:55:16,706 [wrapper] Pilot exit status: 0
[2026-01-26 14:55:16] 2026-01-26 14:55:16,712 [wrapper] pandaids: 6982977389
[2026-01-26 14:55:16] 2026-01-26 14:55:16,729 [wrapper] cleanup supervisor_pilot  753937 717969
[2026-01-26 14:55:16] 2026-01-26 14:55:16,731 [wrapper] Test setup, not cleaning
[2026-01-26 14:55:16] 2026-01-26 14:55:16,733 [wrapper] apfmon messages muted
[2026-01-26 14:55:16] 2026-01-26 14:55:16,734 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:55:16] 2026-01-26 14:55:16,736 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:55:16]  *** Error codes and diagnostics ***
[2026-01-26 14:55:16]     "exeErrorCode": 0,
[2026-01-26 14:55:16]     "exeErrorDiag": "",
[2026-01-26 14:55:16]     "pilotErrorCode": 0,
[2026-01-26 14:55:16]     "pilotErrorDiag": "",
[2026-01-26 14:55:16]  *** Listing of results directory ***
[2026-01-26 14:55:16] total 415428
[2026-01-26 14:55:16] -rw-r--r-- 1 boinc boinc    584422 Jan 25 11:29 pilot3.tar.gz
[2026-01-26 14:55:16] -rwx------ 1 boinc boinc     36322 Jan 25 11:30 runpilot2-wrapper.sh
[2026-01-26 14:55:16] -rw-r--r-- 1 boinc boinc      5111 Jan 25 11:32 queuedata.json
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc       100 Jan 26 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:55:16] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 13:29 run_atlas
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc       105 Jan 26 13:29 job.xml
[2026-01-26 14:55:16] -rw-r--r-- 2 boinc boinc     15845 Jan 26 13:29 start_atlas.sh
[2026-01-26 14:55:16] drwxrwx--x 2 boinc boinc      4096 Jan 26 13:29 shared
[2026-01-26 14:55:16] -rw-r--r-- 2 boinc boinc    597764 Jan 26 13:29 input.tar.gz
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc      6934 Jan 26 13:29 init_data.xml
[2026-01-26 14:55:16] -rw-r--r-- 2 boinc boinc 251317166 Jan 26 13:29 EVNT.48330011._000008.pool.root.1
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc         0 Jan 26 13:29 boinc_setup_complete
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc         0 Jan 26 13:29 boinc_lockfile
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc      2604 Jan 26 13:29 pandaJob.out
[2026-01-26 14:55:16] -rw------- 1 boinc boinc   1002197 Jan 26 13:31 agis_schedconf.cvmfs.json
[2026-01-26 14:55:16] -rw------- 1 boinc boinc   1516246 Jan 26 13:31 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:55:16] -rw------- 1 boinc boinc       414 Jan 26 13:31 workernode_map.json
[2026-01-26 14:55:16] drwx------ 5 boinc boinc      4096 Jan 26 13:32 pilot3
[2026-01-26 14:55:16] -rw------- 1 boinc boinc 167889279 Jan 26 14:54 HITS.48330013._000180.pool.root.1
[2026-01-26 14:55:16] -rw------- 1 boinc boinc        95 Jan 26 14:54 pilot_heartbeat.json
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc       529 Jan 26 14:54 boinc_task_state.xml
[2026-01-26 14:55:16] -rw------- 1 boinc boinc      1023 Jan 26 14:54 memory_monitor_summary.json
[2026-01-26 14:55:16] -rw------- 1 boinc boinc    380831 Jan 26 14:54 log.48330013._000180.job.log.tgz.1
[2026-01-26 14:55:16] -rw------- 1 boinc boinc      6277 Jan 26 14:54 heartbeat.json
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc        27 Jan 26 14:55 wrapper_checkpoint.txt
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 14:55 boinc_mmap_file
[2026-01-26 14:55:16] -rw------- 1 boinc boinc      4914 Jan 26 14:55 pilotlog.txt
[2026-01-26 14:55:16] -rw------- 1 boinc boinc    748579 Jan 26 14:55 log.48330013._000180.job.log.1
[2026-01-26 14:55:16] -rw------- 1 boinc boinc       357 Jan 26 14:55 output.list
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc       620 Jan 26 14:55 runtime_log
[2026-01-26 14:55:16] -rw------- 1 boinc boinc   1146880 Jan 26 14:55 result.tar.gz
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc      9156 Jan 26 14:55 runtime_log.err
[2026-01-26 14:55:16] -rw------- 1 boinc boinc       648 Jan 26 14:55 6AuLDm7UD48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZu0KDm0CAMvm.diag
[2026-01-26 14:55:16] -rw-rw-r-- 1 boinc boinc     21393 Jan 26 14:55 stderr.txt
[2026-01-26 14:55:16] HITS file was successfully produced:
[2026-01-26 14:55:16] -rw------- 1 boinc boinc 167889279 Jan 26 14:54 shared/HITS.pool.root.1
[2026-01-26 14:55:16]  *** Contents of shared directory: ***
[2026-01-26 14:55:16] total 411112
[2026-01-26 14:55:16] -rw-r--r-- 2 boinc boinc     15845 Jan 26 13:29 start_atlas.sh
[2026-01-26 14:55:16] -rw-r--r-- 2 boinc boinc    597764 Jan 26 13:29 input.tar.gz
[2026-01-26 14:55:16] -rw-r--r-- 2 boinc boinc 251317166 Jan 26 13:29 ATLAS.root_0
[2026-01-26 14:55:16] -rw------- 1 boinc boinc 167889279 Jan 26 14:54 HITS.pool.root.1
[2026-01-26 14:55:16] -rw------- 1 boinc boinc   1146880 Jan 26 14:55 result.tar.gz
14:55:18 (713867): run_atlas exited; CPU time 27472.540027
14:55:18 (713867): called boinc_finish(0)

</stderr_txt>
]]>

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