Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:26 (2223602): wrapper (7.7.26015): starting
11:29:26 (2223602): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 11:29:26] Arguments: --nthreads 3
[2026-01-26 11:29:26] Threads: 3
[2026-01-26 11:29:26] Checking for CVMFS
[2026-01-26 11:29:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:29:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:29:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:29:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:29:27] 2.9.2.0 990677 8316 96588 155543 2 50 19818466 36864000 0 130560 0 3609010 99.987 262795 6606 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 11:29:27] CVMFS is ok
[2026-01-26 11:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:29:27] Further information can be found at the LHC@home message board.
[2026-01-26 11:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:29:27] Checking for apptainer binary...
[2026-01-26 11:29:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:29:27] Running /usr/bin/apptainer --version
[2026-01-26 11:29:27] apptainer version 1.4.1-1.1
[2026-01-26 11:29:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:29:27] cosA125a
[2026-01-26 11:29:27] apptainer works
[2026-01-26 11:29:27] Set ATHENA_PROC_NUMBER=3
[2026-01-26 11:29:27] Set ATHENA_CORE_NUMBER=3
[2026-01-26 11:29:27] Starting ATLAS job with PandaID=6982978718
[2026-01-26 11:29:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:49:46]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:49:46]  direct_access_wan=False
[2026-01-26 12:49:46]  domain=
[2026-01-26 12:49:46]  filesize=271909
[2026-01-26 12:49:46]  filetype=log
[2026-01-26 12:49:46]  guid=bfa17b74-b8a7-4ccd-afeb-bcda98d4cbd6
[2026-01-26 12:49:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 12:49:46]  is_altstaged=None
[2026-01-26 12:49:46]  is_tar=False
[2026-01-26 12:49:46]  lfn=log.48310724._008733.job.log.tgz.1
[2026-01-26 12:49:46]  mtime=0
[2026-01-26 12:49:46]  protocol_id=None
[2026-01-26 12:49:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 12:49:46]  replicas=None
[2026-01-26 12:49:46]  scope=mc23_13p6TeV
[2026-01-26 12:49:46]  status=None
[2026-01-26 12:49:46]  status_code=0
[2026-01-26 12:49:46]  storage_token=
[2026-01-26 12:49:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6982978718/log.48310724._008733.job.log.tgz.1
[2026-01-26 12:49:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/db/log.48310724._008733.job.log.tgz.1
[2026-01-26 12:49:46]  workdir=None
[2026-01-26 12:49:46] ]
[2026-01-26 12:49:46] 2026-01-26 11:48:38,205 | INFO     | transferring file log.48310724._008733.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6982978718/log.48310724._008733.job.log.tgz.1 to /local/data/boinc/
[2026-01-26 12:49:46] 2026-01-26 11:48:38,205 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6982978718/log.48310724._008733.job.log.tgz.1 /local/data/boinc/slots/0/log.48310724._0087
[2026-01-26 12:49:46] 2026-01-26 11:48:38,218 | INFO     | adding to output.list: log.48310724._008733.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/db/log.48310724._008733.job.log.tg
[2026-01-26 12:49:46] 2026-01-26 11:48:38,218 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 12:49:46] 2026-01-26 11:48:38,218 | INFO     | summary of transferred files:
[2026-01-26 12:49:46] 2026-01-26 11:48:38,218 | INFO     |  -- lfn=log.48310724._008733.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 12:49:46] 2026-01-26 11:48:38,218 | INFO     | stage-out finished correctly
[2026-01-26 12:49:46] 2026-01-26 11:48:38,606 | INFO     | monitor loop #366: job 0:6982978718 is in state 'finished'
[2026-01-26 12:49:46] 2026-01-26 11:48:38,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,003 | INFO     | time since job start (4744s) is within the limit (349056.0s)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,403 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 12:49:46] 2026-01-26 11:48:40,868 | INFO     | job 6982978718 has state=finished
[2026-01-26 12:49:46] 2026-01-26 11:48:40,868 | INFO     | preparing for final server update for job 6982978718 in state='finished'
[2026-01-26 12:49:46] 2026-01-26 11:48:40,868 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6982978718/jobReport.json
[2026-01-26 12:49:46] 2026-01-26 11:48:40,870 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-26 12:49:46] 2026-01-26 11:48:40,870 | INFO     | this job has now completed (state=finished)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,870 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,870 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:49:46] 2026-01-26 11:48:40,870 | INFO     | job 6982978718 has finished - writing final server update
[2026-01-26 12:49:46] 2026-01-26 11:48:40,870 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,872 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6982978718/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,872 | INFO     | extracted standard info from prmon json
[2026-01-26 12:49:46] 2026-01-26 11:48:40,872 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:49:46] 2026-01-26 11:48:40,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:49:46] 2026-01-26 11:48:40,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:49:46] 2026-01-26 11:48:40,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | sum of square deviations: 110960220.0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | sum of deviations: -11782155978.0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | mean x: 1769425833.0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | mean y: 2483858.2535211267
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | intersect: 187886494505.57
[2026-01-26 12:49:46] 2026-01-26 11:48:40,873 | INFO     | chi2: 0.05381175072366665
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | current memory leak: -106.18 B/s (using 71 data points, chi2=0.05)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | could have reported an average CPU frequency of 3634 MHz (6 samples)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | ..............................
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . Timing measurements:
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . get job = 0 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . initial setup = 3 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . payload setup = 2 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . stage-in = 0 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . payload execution = 4723 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . stage-out = 0 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | . log creation = 0 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,874 | INFO     | ..............................
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | 
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | job summary report
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | --------------------------------------------------
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | PanDA job id: 6982978718
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | task id: 48310724
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | errors: (none)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | pilot state: finished 
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | transexitcode: 0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | exeerrorcode: 0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | exeerrordiag: 
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | exitcode: 0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | exitmsg: OK
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | cpuconsumptiontime: 13610 s
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | nevents: 400
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | neventsw: 0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | pid: 2232071
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | pgrp: 2232071
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | corecount: 3
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | event service: False
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | sizes: {0: 2284256, 10: 2284256, 4730: 2310585, 4731: 2319589, 4733: 2319839}
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | --------------------------------------------------
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | 
[2026-01-26 12:49:46] 2026-01-26 11:48:40,903 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | job 6982978718 has completed (purged errors)
[2026-01-26 12:49:46] 2026-01-26 11:48:40,917 | INFO     | overall cleanup function is called
[2026-01-26 12:49:46] 2026-01-26 11:48:41,920 | INFO     | --- collectZombieJob: --- 10, [2232071]
[2026-01-26 12:49:46] 2026-01-26 11:48:41,920 | INFO     | zombie collector waiting for pid 2232071
[2026-01-26 12:49:46] 2026-01-26 11:48:41,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:49:46] 2026-01-26 11:48:41,920 | INFO     | collected zombie processes
[2026-01-26 12:49:46] 2026-01-26 11:48:41,920 | INFO     | will attempt to kill all subprocesses of pid=2232071
[2026-01-26 12:49:46] 2026-01-26 11:48:41,968 | INFO     | process IDs to be killed: [2232071] (in reverse order)
[2026-01-26 12:49:46] 2026-01-26 11:48:41,993 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:49:46] 2026-01-26 11:48:41,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:49:46] 2026-01-26 11:48:41,995 | INFO     | did not find any defunct processes belonging to 2232071
[2026-01-26 12:49:46] 2026-01-26 11:48:41,996 | INFO     | did not find any defunct processes belonging to 2232071
[2026-01-26 12:49:46] 2026-01-26 11:48:41,996 | INFO     | ready for new job
[2026-01-26 12:49:46] 2026-01-26 11:48:41,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:49:46] 2026-01-26 11:48:41,997 | INFO     | **************************************
[2026-01-26 12:49:46] 2026-01-26 11:48:41,997 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:49:46] 2026-01-26 11:48:41,997 | INFO     | **************************************
[2026-01-26 12:49:46] 2026-01-26 11:48:41,997 | INFO     | 
[2026-01-26 12:49:46] 2026-01-26 11:48:41,997 | INFO     | architecture information:
[2026-01-26 12:49:46] 2026-01-26 11:48:41,998 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:49:46] 2026-01-26 11:48:42,006 | INFO     | cat /etc/os-release:
[2026-01-26 12:49:46] NAME="CentOS Linux"
[2026-01-26 12:49:46] VERSION="7 (Core)"
[2026-01-26 12:49:46] ID="centos"
[2026-01-26 12:49:46] ID_LIKE="rhel fedora"
[2026-01-26 12:49:46] VERSION_ID="7"
[2026-01-26 12:49:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:49:46] ANSI_COLOR="0;31"
[2026-01-26 12:49:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:49:46] HOME_URL="https://www.centos.org/"
[2026-01-26 12:49:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:49:46] 
[2026-01-26 12:49:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:49:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:49:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:49:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:49:46] 
[2026-01-26 12:49:46] 2026-01-26 11:48:42,006 | INFO     | **************************************
[2026-01-26 12:49:46] 2026-01-26 11:48:42,509 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 12:49:46] 2026-01-26 11:48:42,522 | INFO     | sufficient remaining disk space (338085019648 B)
[2026-01-26 12:49:46] 2026-01-26 11:48:42,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:49:46] 2026-01-26 11:48:42,522 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:49:46] 2026-01-26 11:48:42,522 | INFO     | update_server=False
[2026-01-26 12:49:46] 2026-01-26 11:48:42,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:49:46] 2026-01-26 11:48:42,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:49:46] 2026-01-26 11:48:42,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:49:46] 2026-01-26 11:48:42,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:49:46] 2026-01-26 11:48:42,523 | INFO     | aborting loop
[2026-01-26 12:49:46] 2026-01-26 11:48:42,913 | INFO     | all job control threads have been joined
[2026-01-26 12:49:46] 2026-01-26 11:48:42,925 | INFO     | all data control threads have been joined
[2026-01-26 12:49:46] 2026-01-26 11:48:43,528 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:43,528 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:43,528 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:43,656 | INFO     | all payload control threads have been joined
[2026-01-26 12:49:46] 2026-01-26 11:48:43,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:49:46] 2026-01-26 11:48:43,918 | INFO     | [job] control thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:43,931 | INFO     | [data] control thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,060 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,592 | INFO     | [job] validate thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,661 | INFO     | [payload] control thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,662 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,666 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,689 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:44,806 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:45,003 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:45,123 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:45,763 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:48:46,530 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:49:46] 2026-01-26 11:49:13,118 | INFO     | PID=2227646 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 12:49:46] 2026-01-26 11:49:13,118 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:49:46] 2026-01-26 11:49:13,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:49:46] 2026-01-26 11:49:13,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:49:46] 2026-01-26 11:49:41,257 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:49:46] 2026-01-26 11:49:41,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700377540416)>', '<ExcThread(monitor, started 140699437627136)>']
[2026-01-26 12:49:46] 2026-01-26 11:49:42,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:49:46] 2026-01-26 11:49:42,263 | INFO     | [monitor] control thread has ended
[2026-01-26 12:49:46] 2026-01-26 11:49:46,708 | INFO     | all workflow threads have been joined
[2026-01-26 12:49:46] 2026-01-26 11:49:46,708 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:49:46] 2026-01-26 11:49:46,709 | INFO     | traces error code: 0
[2026-01-26 12:49:46] 2026-01-26 11:49:46,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:49:46] 2026-01-26 11:49:46,759 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:49:46] 2026-01-26 11:49:46,761 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:49:46] 2026-01-26 11:49:46,764 [wrapper] pilotpid: 2227646
[2026-01-26 12:49:46] 2026-01-26 11:49:46,766 [wrapper] Pilot exit status: 0
[2026-01-26 12:49:46] 2026-01-26 11:49:46,773 [wrapper] pandaids: 6982978718
[2026-01-26 12:49:46] 2026-01-26 11:49:46,790 [wrapper] cleanup supervisor_pilot 2237462 2227647
[2026-01-26 12:49:46] 2026-01-26 11:49:46,792 [wrapper] Test setup, not cleaning
[2026-01-26 12:49:46] 2026-01-26 11:49:46,795 [wrapper] apfmon messages muted
[2026-01-26 12:49:46] 2026-01-26 11:49:46,797 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:49:46] 2026-01-26 11:49:46,799 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:49:46]  *** Error codes and diagnostics ***
[2026-01-26 12:49:46]     "exeErrorCode": 0,
[2026-01-26 12:49:46]     "exeErrorDiag": "",
[2026-01-26 12:49:46]     "pilotErrorCode": 0,
[2026-01-26 12:49:46]     "pilotErrorDiag": "",
[2026-01-26 12:49:46]  *** Listing of results directory ***
[2026-01-26 12:49:46] total 672592
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc    584422 Jan 25 12:29 pilot3.tar.gz
[2026-01-26 12:49:46] -rwx------ 1 boinc boinc     36322 Jan 25 12:31 runpilot2-wrapper.sh
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc      5111 Jan 25 12:34 queuedata.json
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc       100 Jan 26 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:49:46] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 11:29 run_atlas
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc       105 Jan 26 11:29 job.xml
[2026-01-26 12:49:46] -rw-r--r-- 2 boinc boinc 501377062 Jan 26 11:29 EVNT.48310721._000175.pool.root.1
[2026-01-26 12:49:46] -rw-r--r-- 2 boinc boinc    597760 Jan 26 11:29 input.tar.gz
[2026-01-26 12:49:46] -rw-r--r-- 2 boinc boinc     15845 Jan 26 11:29 start_atlas.sh
[2026-01-26 12:49:46] drwxrwx--x 2 boinc boinc      4096 Jan 26 11:29 shared
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc         0 Jan 26 11:29 boinc_setup_complete
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc      6440 Jan 26 11:29 init_data.xml
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc         0 Jan 26 11:29 boinc_lockfile
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc      2534 Jan 26 11:29 pandaJob.out
[2026-01-26 12:49:46] -rw------- 1 boinc boinc   1004246 Jan 26 11:29 agis_schedconf.cvmfs.json
[2026-01-26 12:49:46] -rw------- 1 boinc boinc   1516246 Jan 26 11:29 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:49:46] -rw------- 1 boinc boinc       429 Jan 26 11:29 workernode_map.json
[2026-01-26 12:49:46] drwx------ 5 boinc boinc      4096 Jan 26 11:29 pilot3
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc       531 Jan 26 12:48 boinc_task_state.xml
[2026-01-26 12:49:46] -rw------- 1 boinc boinc 181477551 Jan 26 12:48 HITS.48310724._008733.pool.root.1
[2026-01-26 12:49:46] -rw------- 1 boinc boinc      1035 Jan 26 12:48 memory_monitor_summary.json
[2026-01-26 12:49:46] -rw------- 1 boinc boinc    271909 Jan 26 12:48 log.48310724._008733.job.log.tgz.1
[2026-01-26 12:49:46] -rw------- 1 boinc boinc      6321 Jan 26 12:48 heartbeat.json
[2026-01-26 12:49:46] -rw------- 1 boinc boinc        95 Jan 26 12:49 pilot_heartbeat.json
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc      8192 Jan 26 12:49 boinc_mmap_file
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc        27 Jan 26 12:49 wrapper_checkpoint.txt
[2026-01-26 12:49:46] -rw------- 1 boinc boinc      4748 Jan 26 12:49 pilotlog.txt
[2026-01-26 12:49:46] -rw------- 1 boinc boinc    697579 Jan 26 12:49 log.48310724._008733.job.log.1
[2026-01-26 12:49:46] -rw------- 1 boinc boinc       357 Jan 26 12:49 output.list
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc       620 Jan 26 12:49 runtime_log
[2026-01-26 12:49:46] -rw------- 1 boinc boinc    983040 Jan 26 12:49 result.tar.gz
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc      8906 Jan 26 12:49 runtime_log.err
[2026-01-26 12:49:46] -rw------- 1 boinc boinc       659 Jan 26 12:49 SIHKDmkVD48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHv0KDmoINjpn.diag
[2026-01-26 12:49:46] -rw-r--r-- 1 boinc boinc     21047 Jan 26 12:49 stderr.txt
[2026-01-26 12:49:46] HITS file was successfully produced:
[2026-01-26 12:49:46] -rw------- 1 boinc boinc 181477551 Jan 26 12:48 shared/HITS.pool.root.1
[2026-01-26 12:49:46]  *** Contents of shared directory: ***
[2026-01-26 12:49:46] total 668424
[2026-01-26 12:49:46] -rw-r--r-- 2 boinc boinc 501377062 Jan 26 11:29 ATLAS.root_0
[2026-01-26 12:49:46] -rw-r--r-- 2 boinc boinc    597760 Jan 26 11:29 input.tar.gz
[2026-01-26 12:49:46] -rw-r--r-- 2 boinc boinc     15845 Jan 26 11:29 start_atlas.sh
[2026-01-26 12:49:46] -rw------- 1 boinc boinc 181477551 Jan 26 12:48 HITS.pool.root.1
[2026-01-26 12:49:46] -rw------- 1 boinc boinc    983040 Jan 26 12:49 result.tar.gz
12:49:48 (2223602): run_atlas exited; CPU time 13634.378527
12:49:48 (2223602): called boinc_finish(0)

</stderr_txt>
]]>

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