Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:17:02 (458309): wrapper (7.7.26015): starting
12:17:02 (458309): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 12:17:02] Arguments: --nthreads 12
[2026-01-26 12:17:02] Threads: 12
[2026-01-26 12:17:02] Checking for CVMFS
[2026-01-26 12:17:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:17:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:17:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:17:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:17:03] 2.13.3.0 177304 874 47128 155545 3 54 2899970 4096000 1824 130560 0 845593 99.985 38439 1019 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 12:17:03] CVMFS is ok
[2026-01-26 12:17:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:17:03] Checking for apptainer binary...
[2026-01-26 12:17:03] apptainer is not installed, using version from CVMFS
[2026-01-26 12:17:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:17:04] ryzen4700s
[2026-01-26 12:17:04] apptainer works
[2026-01-26 12:17:04] Set ATHENA_PROC_NUMBER=12
[2026-01-26 12:17:04] Set ATHENA_CORE_NUMBER=12
[2026-01-26 12:17:04] Starting ATLAS job with PandaID=6982977357
[2026-01-26 12:17:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:42:01]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:42:01] 2026-01-26 14:41:15,777 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:42:01] 2026-01-26 14:41:16,578 | INFO     | job 6982977357 has state=finished
[2026-01-26 14:42:01] 2026-01-26 14:41:16,578 | INFO     | preparing for final server update for job 6982977357 in state='finished'
[2026-01-26 14:42:01] 2026-01-26 14:41:16,579 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6982977357/jobReport.json
[2026-01-26 14:42:01] 2026-01-26 14:41:16,583 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/1/workernode_map.json
[2026-01-26 14:42:01] 2026-01-26 14:41:16,583 | INFO     | this job has now completed (state=finished)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,584 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,584 | INFO     | log transfer has been attempted: DONE
[2026-01-26 14:42:01] 2026-01-26 14:41:16,584 | INFO     | job 6982977357 has finished - writing final server update
[2026-01-26 14:42:01] 2026-01-26 14:41:16,584 | INFO     | total number of processed events: 400 (read)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,592 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6982977357/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,592 | INFO     | extracted standard info from prmon json
[2026-01-26 14:42:01] 2026-01-26 14:41:16,593 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:42:01] 2026-01-26 14:41:16,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:42:01] 2026-01-26 14:41:16,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:42:01] 2026-01-26 14:41:16,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:42:01] 2026-01-26 14:41:16,599 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:42:01] 2026-01-26 14:41:16,599 | INFO     | sum of square deviations: 869188390.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,600 | INFO     | sum of deviations: 13304031802.000002
[2026-01-26 14:42:01] 2026-01-26 14:41:16,600 | INFO     | mean x: 1769434154.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,600 | INFO     | mean y: 2663240.1843971633
[2026-01-26 14:42:01] 2026-01-26 14:41:16,600 | INFO     | intersect: -27080772902.308216
[2026-01-26 14:42:01] 2026-01-26 14:41:16,603 | INFO     | chi2: 1.8335080656778977
[2026-01-26 14:42:01] 2026-01-26 14:41:16,603 | INFO     | sum of square deviations: 779958810.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,604 | INFO     | sum of deviations: 12811669295.5
[2026-01-26 14:42:01] 2026-01-26 14:41:16,604 | INFO     | mean x: 1769434001.5
[2026-01-26 14:42:01] 2026-01-26 14:41:16,604 | INFO     | mean y: 2662399.580882353
[2026-01-26 14:42:01] 2026-01-26 14:41:16,604 | INFO     | intersect: -29062209971.604015
[2026-01-26 14:42:01] 2026-01-26 14:41:16,604 | INFO     | chi2: 1.8361342692984493
[2026-01-26 14:42:01] 2026-01-26 14:41:16,608 | INFO     | current chi2=1.8361342692984493 (change=-0.14323381880409505 %)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,608 | INFO     | right removable region: 135
[2026-01-26 14:42:01] 2026-01-26 14:41:16,608 | INFO     | sum of square deviations: 779958810.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,609 | INFO     | sum of deviations: -12895106010.500004
[2026-01-26 14:42:01] 2026-01-26 14:41:16,609 | INFO     | mean x: 1769434306.5
[2026-01-26 14:42:01] 2026-01-26 14:41:16,609 | INFO     | mean y: 2707430.213235294
[2026-01-26 14:42:01] 2026-01-26 14:41:16,609 | INFO     | intersect: 29256871455.78922
[2026-01-26 14:42:01] 2026-01-26 14:41:16,609 | INFO     | chi2: 0.16253553674851642
[2026-01-26 14:42:01] 2026-01-26 14:41:16,609 | INFO     | current chi2=0.16253553674851642 (change=91.13527015282463 %)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,610 | INFO     | sum of square deviations: 697054930.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,610 | INFO     | sum of deviations: -11847572683.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,613 | INFO     | mean x: 1769434459.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,613 | INFO     | mean y: 2705346.5954198474
[2026-01-26 14:42:01] 2026-01-26 14:41:16,613 | INFO     | intersect: 30077097562.438843
[2026-01-26 14:42:01] 2026-01-26 14:41:16,613 | INFO     | chi2: 0.1304652201604432
[2026-01-26 14:42:01] 2026-01-26 14:41:16,613 | INFO     | current chi2=0.1304652201604432 (change=19.731264454304604 %)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,613 | INFO     | left removable region: 20
[2026-01-26 14:42:01] 2026-01-26 14:41:16,616 | INFO     | sum of square deviations: 471562330.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,616 | INFO     | sum of deviations: -144494359.99999917
[2026-01-26 14:42:01] 2026-01-26 14:41:16,619 | INFO     | mean x: 1769434581.0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,619 | INFO     | mean y: 2680619.513043478
[2026-01-26 14:42:01] 2026-01-26 14:41:16,619 | INFO     | intersect: 544864125.4420725
[2026-01-26 14:42:01] 2026-01-26 14:41:16,619 | INFO     | chi2: 0.033425401484835145
[2026-01-26 14:42:01] 2026-01-26 14:41:16,619 | INFO     | current memory leak: -0.31 B/s (using 115 data points, chi2=0.03)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | could have reported an average CPU frequency of 3686 MHz (8 samples)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | ..............................
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | . Timing measurements:
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | . get job = 0 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | . initial setup = 13 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | . payload setup = 12 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,620 | INFO     | . stage-in = 0 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,622 | INFO     | . payload execution = 8595 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,622 | INFO     | . stage-out = 1 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,622 | INFO     | . log creation = 0 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,622 | INFO     | ..............................
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | 
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | job summary report
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | --------------------------------------------------
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | PanDA job id: 6982977357
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | task id: 48330013
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | errors: (none)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | pilot state: finished 
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | transexitcode: 0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | exeerrorcode: 0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,778 | INFO     | exeerrordiag: 
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | exitcode: 0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | exitmsg: OK
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | cpuconsumptiontime: 46209 s
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | nevents: 400
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | neventsw: 0
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | pid: 466894
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | pgrp: 466894
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | corecount: 12
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | event service: False
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | sizes: {0: 2283943, 1: 2284404, 8611: 2312247, 8614: 2321347, 8615: 2321485}
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | --------------------------------------------------
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | 
[2026-01-26 14:42:01] 2026-01-26 14:41:16,779 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-26 14:42:01] 2026-01-26 14:41:16,826 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,826 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | job 6982977357 has completed (purged errors)
[2026-01-26 14:42:01] 2026-01-26 14:41:16,830 | INFO     | overall cleanup function is called
[2026-01-26 14:42:01] 2026-01-26 14:41:17,844 | INFO     | --- collectZombieJob: --- 10, [466894]
[2026-01-26 14:42:01] 2026-01-26 14:41:17,844 | INFO     | zombie collector waiting for pid 466894
[2026-01-26 14:42:01] 2026-01-26 14:41:17,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:42:01] 2026-01-26 14:41:17,844 | INFO     | collected zombie processes
[2026-01-26 14:42:01] 2026-01-26 14:41:17,844 | INFO     | will attempt to kill all subprocesses of pid=466894
[2026-01-26 14:42:01] 2026-01-26 14:41:18,083 | INFO     | process IDs to be killed: [466894] (in reverse order)
[2026-01-26 14:42:01] 2026-01-26 14:41:18,183 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:42:01] 2026-01-26 14:41:18,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:42:01] 2026-01-26 14:41:18,189 | INFO     | did not find any defunct processes belonging to 466894
[2026-01-26 14:42:01] 2026-01-26 14:41:18,196 | INFO     | did not find any defunct processes belonging to 466894
[2026-01-26 14:42:01] 2026-01-26 14:41:18,197 | INFO     | ready for new job
[2026-01-26 14:42:01] 2026-01-26 14:41:18,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:42:01] 2026-01-26 14:41:18,199 | INFO     | **************************************
[2026-01-26 14:42:01] 2026-01-26 14:41:18,199 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:42:01] 2026-01-26 14:41:18,199 | INFO     | **************************************
[2026-01-26 14:42:01] 2026-01-26 14:41:18,199 | INFO     | 
[2026-01-26 14:42:01] 2026-01-26 14:41:18,203 | INFO     | architecture information:
[2026-01-26 14:42:01] 2026-01-26 14:41:18,204 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:42:01] 2026-01-26 14:41:18,239 | INFO     | cat /etc/os-release:
[2026-01-26 14:42:01] NAME="CentOS Linux"
[2026-01-26 14:42:01] VERSION="7 (Core)"
[2026-01-26 14:42:01] ID="centos"
[2026-01-26 14:42:01] ID_LIKE="rhel fedora"
[2026-01-26 14:42:01] VERSION_ID="7"
[2026-01-26 14:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:42:01] ANSI_COLOR="0;31"
[2026-01-26 14:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:42:01] HOME_URL="https://www.centos.org/"
[2026-01-26 14:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:42:01] 
[2026-01-26 14:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:42:01] 
[2026-01-26 14:42:01] 2026-01-26 14:41:18,239 | INFO     | **************************************
[2026-01-26 14:42:01] 2026-01-26 14:41:18,742 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-26 14:42:01] 2026-01-26 14:41:18,777 | INFO     | sufficient remaining disk space (106831020032 B)
[2026-01-26 14:42:01] 2026-01-26 14:41:18,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:42:01] 2026-01-26 14:41:18,778 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:42:01] 2026-01-26 14:41:18,778 | INFO     | update_server=False
[2026-01-26 14:42:01] 2026-01-26 14:41:18,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:42:01] 2026-01-26 14:41:18,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:42:01] 2026-01-26 14:41:18,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:42:01] 2026-01-26 14:41:19,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:42:01] 2026-01-26 14:41:19,287 | INFO     | aborting loop
[2026-01-26 14:42:01] 2026-01-26 14:41:19,332 | INFO     | all job control threads have been joined
[2026-01-26 14:42:01] 2026-01-26 14:41:19,512 | INFO     | all data control threads have been joined
[2026-01-26 14:42:01] 2026-01-26 14:41:19,783 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:19,788 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,132 | INFO     | all payload control threads have been joined
[2026-01-26 14:42:01] 2026-01-26 14:41:20,174 | INFO     | [job] validate thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,188 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,294 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,337 | INFO     | [job] control thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,406 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,517 | INFO     | [data] control thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,786 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:20,987 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:21,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:42:01] 2026-01-26 14:41:21,085 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:21,132 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:21,137 | INFO     | [payload] control thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:25,038 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:29,578 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:42:01] 2026-01-26 14:41:30,583 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:42:01] 2026-01-26 14:41:48,530 | INFO     | PID=462409 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 14:42:01] 2026-01-26 14:41:48,530 | INFO     | .. there are 3 such processes running
[2026-01-26 14:42:01] 2026-01-26 14:41:48,531 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:42:01] 2026-01-26 14:41:48,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:42:01] 2026-01-26 14:41:48,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:42:01] 2026-01-26 14:41:53,919 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:42:01] 2026-01-26 14:41:54,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134432093357888)>', '<ExcThread(monitor, started 134431469729536)>']
[2026-01-26 14:42:01] 2026-01-26 14:41:55,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:42:01] 2026-01-26 14:41:55,570 | INFO     | [monitor] control thread has ended
[2026-01-26 14:42:01] 2026-01-26 14:41:59,701 | INFO     | all workflow threads have been joined
[2026-01-26 14:42:01] 2026-01-26 14:41:59,701 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:42:01] 2026-01-26 14:41:59,701 | INFO     | traces error code: 0
[2026-01-26 14:42:01] 2026-01-26 14:41:59,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:42:01] 2026-01-26 14:42:00,337 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:42:01] 2026-01-26 14:42:00,345 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:42:01] 2026-01-26 14:42:00,353 [wrapper] pilotpid: 462409
[2026-01-26 14:42:01] 2026-01-26 14:42:00,360 [wrapper] Pilot exit status: 0
[2026-01-26 14:42:01] 2026-01-26 14:42:00,388 [wrapper] pandaids: 6982977357
[2026-01-26 14:42:01] 2026-01-26 14:42:00,447 [wrapper] cleanup supervisor_pilot  498568 462410
[2026-01-26 14:42:01] 2026-01-26 14:42:00,454 [wrapper] Test setup, not cleaning
[2026-01-26 14:42:01] 2026-01-26 14:42:00,462 [wrapper] apfmon messages muted
[2026-01-26 14:42:01] 2026-01-26 14:42:00,471 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:42:01] 2026-01-26 14:42:00,478 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:42:01]  *** Error codes and diagnostics ***
[2026-01-26 14:42:01]     "exeErrorCode": 0,
[2026-01-26 14:42:01]     "exeErrorDiag": "",
[2026-01-26 14:42:01]     "pilotErrorCode": 0,
[2026-01-26 14:42:01]     "pilotErrorDiag": "",
[2026-01-26 14:42:01]  *** Listing of results directory ***
[2026-01-26 14:42:01] total 412256
[2026-01-26 14:42:01] -rwx------ 1 boinc boinc     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-26 14:42:01] -rw-r--r-- 1 boinc boinc    584422 Jan 25 11:29 pilot3.tar.gz
[2026-01-26 14:42:01] -rw-r--r-- 1 boinc boinc      5111 Jan 25 11:31 queuedata.json
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc       100 Jan 26 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:42:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 12:16 run_atlas
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc       105 Jan 26 12:16 job.xml
[2026-01-26 14:42:01] -rw-r--r-- 2 boinc boinc 249799447 Jan 26 12:17 EVNT.48330011._000006.pool.root.1
[2026-01-26 14:42:01] drwxrwx--x 2 boinc boinc      4096 Jan 26 12:17 shared
[2026-01-26 14:42:01] -rw-r--r-- 2 boinc boinc    597768 Jan 26 12:17 input.tar.gz
[2026-01-26 14:42:01] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:17 start_atlas.sh
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc      9470 Jan 26 12:17 init_data.xml
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc         0 Jan 26 12:17 boinc_setup_complete
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc         0 Jan 26 12:17 boinc_lockfile
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc      2603 Jan 26 12:17 pandaJob.out
[2026-01-26 14:42:01] -rw------- 1 boinc boinc   1002189 Jan 26 12:17 agis_schedconf.cvmfs.json
[2026-01-26 14:42:01] -rw------- 1 boinc boinc   1516246 Jan 26 12:17 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:42:01] -rw------- 1 boinc boinc       426 Jan 26 12:17 workernode_map.json
[2026-01-26 14:42:01] drwx------ 5 boinc boinc      4096 Jan 26 12:17 pilot3
[2026-01-26 14:42:01] -rw------- 1 boinc boinc 164995202 Jan 26 14:40 HITS.48330013._000148.pool.root.1
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc       529 Jan 26 14:40 boinc_task_state.xml
[2026-01-26 14:42:01] -rw------- 1 boinc boinc      1024 Jan 26 14:41 memory_monitor_summary.json
[2026-01-26 14:42:01] -rw------- 1 boinc boinc    456940 Jan 26 14:41 log.48330013._000148.job.log.tgz.1
[2026-01-26 14:42:01] -rw------- 1 boinc boinc      6295 Jan 26 14:41 heartbeat.json
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 14:41 boinc_mmap_file
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc        27 Jan 26 14:41 wrapper_checkpoint.txt
[2026-01-26 14:42:01] -rw------- 1 boinc boinc        95 Jan 26 14:41 pilot_heartbeat.json
[2026-01-26 14:42:01] -rw------- 1 boinc boinc      4914 Jan 26 14:41 pilotlog.txt
[2026-01-26 14:42:01] -rw------- 1 boinc boinc   1250032 Jan 26 14:42 log.48330013._000148.job.log.1
[2026-01-26 14:42:01] -rw------- 1 boinc boinc       357 Jan 26 14:42 output.list
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc       620 Jan 26 14:42 runtime_log
[2026-01-26 14:42:01] -rw------- 1 boinc boinc   1720320 Jan 26 14:42 result.tar.gz
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc      9176 Jan 26 14:42 runtime_log.err
[2026-01-26 14:42:01] -rw------- 1 boinc boinc       654 Jan 26 14:42 NdyNDmiTD48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpp0KDmdqzPMo.diag
[2026-01-26 14:42:01] -rw-rw-r-- 1 boinc boinc     21018 Jan 26 14:42 stderr.txt
[2026-01-26 14:42:01] HITS file was successfully produced:
[2026-01-26 14:42:01] -rw------- 1 boinc boinc 164995202 Jan 26 14:40 shared/HITS.pool.root.1
[2026-01-26 14:42:01]  *** Contents of shared directory: ***
[2026-01-26 14:42:01] total 407368
[2026-01-26 14:42:01] -rw-r--r-- 2 boinc boinc 249799447 Jan 26 12:17 ATLAS.root_0
[2026-01-26 14:42:01] -rw-r--r-- 2 boinc boinc    597768 Jan 26 12:17 input.tar.gz
[2026-01-26 14:42:01] -rw-r--r-- 2 boinc boinc     15845 Jan 26 12:17 start_atlas.sh
[2026-01-26 14:42:01] -rw------- 1 boinc boinc 164995202 Jan 26 14:40 HITS.pool.root.1
[2026-01-26 14:42:01] -rw------- 1 boinc boinc   1720320 Jan 26 14:42 result.tar.gz
14:42:02 (458309): run_atlas exited; CPU time 46275.919461
14:42:02 (458309): called boinc_finish(0)

</stderr_txt>
]]>

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