Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:28:19 (173201): wrapper (7.7.26015): starting
05:28:19 (173201): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 05:28:19] Arguments: --nthreads 12
[2026-01-27 05:28:19] Threads: 12
[2026-01-27 05:28:19] Checking for CVMFS
[2026-01-27 05:28:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 05:28:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 05:28:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 05:28:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 05:28:20] 2.13.3.0 3278 1911 48656 155574 0 50 2111283 4096000 912 130560 0 514453 99.966 77994 650 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 05:28:20] CVMFS is ok
[2026-01-27 05:28:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 05:28:20] Checking for apptainer binary...
[2026-01-27 05:28:20] apptainer is not installed, using version from CVMFS
[2026-01-27 05:28:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 05:28:21] g630
[2026-01-27 05:28:21] apptainer works
[2026-01-27 05:28:21] Set ATHENA_PROC_NUMBER=12
[2026-01-27 05:28:21] Set ATHENA_CORE_NUMBER=12
[2026-01-27 05:28:21] Starting ATLAS job with PandaID=6980224216
[2026-01-27 05:28:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 11:35:34]  *** The last 200 lines of the pilot log: ***
[2026-01-27 11:35:34] 2026-01-27 11:34:44,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,455 | INFO     | log transfer has been attempted: DONE
[2026-01-27 11:35:34] 2026-01-27 11:34:44,455 | INFO     | job 6980224216 has finished - writing final server update
[2026-01-27 11:35:34] 2026-01-27 11:34:44,455 | INFO     | total number of processed events: 400 (read)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,456 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6980224216/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,456 | INFO     | extracted standard info from prmon json
[2026-01-27 11:35:34] 2026-01-27 11:34:44,456 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 11:35:34] 2026-01-27 11:34:44,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 11:35:34] 2026-01-27 11:34:44,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 11:35:34] 2026-01-27 11:34:44,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 11:35:34] 2026-01-27 11:34:44,470 | INFO     | fitting pss+swap vs Time
[2026-01-27 11:35:34] 2026-01-27 11:34:44,471 | INFO     | sum of square deviations: 14467136370.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,482 | INFO     | sum of deviations: 29429817006.499985
[2026-01-27 11:35:34] 2026-01-27 11:34:44,482 | INFO     | mean x: 1769502703.5
[2026-01-27 11:35:34] 2026-01-27 11:34:44,482 | INFO     | mean y: 2684765.2527777776
[2026-01-27 11:35:34] 2026-01-27 11:34:44,482 | INFO     | intersect: -3596931594.51974
[2026-01-27 11:35:34] 2026-01-27 11:34:44,482 | INFO     | chi2: 2.8138065916861263
[2026-01-27 11:35:34] 2026-01-27 11:34:44,483 | INFO     | sum of square deviations: 13872669410.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,494 | INFO     | sum of deviations: 53334979730.00001
[2026-01-27 11:35:34] 2026-01-27 11:34:44,494 | INFO     | mean x: 1769502551.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,494 | INFO     | mean y: 2690826.2169014085
[2026-01-27 11:35:34] 2026-01-27 11:34:44,494 | INFO     | intersect: -6800353339.29445
[2026-01-27 11:35:34] 2026-01-27 11:34:44,494 | INFO     | chi2: 2.1098122755614916
[2026-01-27 11:35:34] 2026-01-27 11:34:44,494 | INFO     | current chi2=2.1098122755614916 (change=25.019285909866955 %)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,495 | INFO     | sum of square deviations: 13294714387.5
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | sum of deviations: 52121207525.000015
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | mean x: 1769502398.5
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | mean y: 2690505.942857143
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | intersect: -6934547785.909374
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | chi2: 2.110367375510054
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | current chi2=2.110367375510054 (change=-0.026310395241891646 %)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,506 | INFO     | right removable region: 349
[2026-01-27 11:35:34] 2026-01-27 11:34:44,507 | INFO     | sum of square deviations: 13872669410.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,518 | INFO     | sum of deviations: -45765681879.99999
[2026-01-27 11:35:34] 2026-01-27 11:34:44,518 | INFO     | mean x: 1769502856.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,518 | INFO     | mean y: 2703972.304225352
[2026-01-27 11:35:34] 2026-01-27 11:34:44,518 | INFO     | intersect: 5840261431.510445
[2026-01-27 11:35:34] 2026-01-27 11:34:44,518 | INFO     | chi2: 1.032574582931705
[2026-01-27 11:35:34] 2026-01-27 11:34:44,518 | INFO     | current chi2=1.032574582931705 (change=63.30328509490938 %)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,519 | INFO     | sum of square deviations: 13294714387.5
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | sum of deviations: -59857449778.5
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | mean x: 1769503008.5
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | mean y: 2707678.202857143
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | intersect: 7969628544.421685
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | chi2: 0.9647322481953227
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | current chi2=0.9647322481953227 (change=6.570211571910198 %)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,530 | INFO     | left removable region: 20
[2026-01-27 11:35:34] 2026-01-27 11:34:44,531 | INFO     | sum of square deviations: 11042365180.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,532 | INFO     | sum of deviations: -37629316928.00001
[2026-01-27 11:35:34] 2026-01-27 11:34:44,532 | INFO     | mean x: 1769502978.0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,532 | INFO     | mean y: 2714860.3951367782
[2026-01-27 11:35:34] 2026-01-27 11:34:44,542 | INFO     | intersect: 6032690076.646935
[2026-01-27 11:35:34] 2026-01-27 11:34:44,542 | INFO     | chi2: 0.18921719625701788
[2026-01-27 11:35:34] 2026-01-27 11:34:44,542 | INFO     | current memory leak: -3.41 B/s (using 329 data points, chi2=0.19)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,542 | INFO     | could have reported an average CPU frequency of 3403 MHz (16 samples)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | ..............................
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . Timing measurements:
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . get job = 0 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . initial setup = 11 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . payload setup = 11 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . stage-in = 0 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . payload execution = 21925 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . stage-out = 7 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | . log creation = 0 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,543 | INFO     | ..............................
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | 
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | job summary report
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | --------------------------------------------------
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | PanDA job id: 6980224216
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | task id: 48314251
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | errors: (none)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | pilot state: finished 
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | transexitcode: 0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | exeerrorcode: 0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | exeerrordiag: 
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | exitcode: 0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,901 | INFO     | exitmsg: OK
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | cpuconsumptiontime: 43438 s
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | nevents: 400
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | neventsw: 0
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | pid: 181586
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | pgrp: 181586
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | corecount: 12
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | event service: False
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | sizes: {0: 2283916, 1: 2284433, 2: 2284433, 21940: 2318499, 21948: 2327543, 21950: 2327599, 21951: 2327921}
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | --------------------------------------------------
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | 
[2026-01-27 11:35:34] 2026-01-27 11:34:44,902 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | job 6980224216 has completed (purged errors)
[2026-01-27 11:35:34] 2026-01-27 11:34:44,941 | INFO     | overall cleanup function is called
[2026-01-27 11:35:34] 2026-01-27 11:34:45,957 | INFO     | --- collectZombieJob: --- 10, [181586]
[2026-01-27 11:35:34] 2026-01-27 11:34:45,957 | INFO     | zombie collector waiting for pid 181586
[2026-01-27 11:35:34] 2026-01-27 11:34:45,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 11:35:34] 2026-01-27 11:34:45,957 | INFO     | collected zombie processes
[2026-01-27 11:35:34] 2026-01-27 11:34:45,957 | INFO     | will attempt to kill all subprocesses of pid=181586
[2026-01-27 11:35:34] 2026-01-27 11:34:46,129 | INFO     | process IDs to be killed: [181586] (in reverse order)
[2026-01-27 11:35:34] 2026-01-27 11:34:46,194 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 11:35:34] 2026-01-27 11:34:46,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 11:35:34] 2026-01-27 11:34:46,196 | INFO     | did not find any defunct processes belonging to 181586
[2026-01-27 11:35:34] 2026-01-27 11:34:46,206 | INFO     | did not find any defunct processes belonging to 181586
[2026-01-27 11:35:34] 2026-01-27 11:34:46,206 | INFO     | ready for new job
[2026-01-27 11:35:34] 2026-01-27 11:34:46,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 11:35:34] 2026-01-27 11:34:46,207 | INFO     | **************************************
[2026-01-27 11:35:34] 2026-01-27 11:34:46,207 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 11:35:34] 2026-01-27 11:34:46,207 | INFO     | **************************************
[2026-01-27 11:35:34] 2026-01-27 11:34:46,207 | INFO     | 
[2026-01-27 11:35:34] 2026-01-27 11:34:46,208 | INFO     | architecture information:
[2026-01-27 11:35:34] 2026-01-27 11:34:46,208 | INFO     | executing command: cat /etc/os-release
[2026-01-27 11:35:34] 2026-01-27 11:34:46,234 | INFO     | cat /etc/os-release:
[2026-01-27 11:35:34] NAME="CentOS Linux"
[2026-01-27 11:35:34] VERSION="7 (Core)"
[2026-01-27 11:35:34] ID="centos"
[2026-01-27 11:35:34] ID_LIKE="rhel fedora"
[2026-01-27 11:35:34] VERSION_ID="7"
[2026-01-27 11:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 11:35:34] ANSI_COLOR="0;31"
[2026-01-27 11:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 11:35:34] HOME_URL="https://www.centos.org/"
[2026-01-27 11:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 11:35:34] 
[2026-01-27 11:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 11:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 11:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 11:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 11:35:34] 
[2026-01-27 11:35:34] 2026-01-27 11:34:46,234 | INFO     | **************************************
[2026-01-27 11:35:34] 2026-01-27 11:34:46,739 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 11:35:34] 2026-01-27 11:34:46,768 | INFO     | sufficient remaining disk space (194072543232 B)
[2026-01-27 11:35:34] 2026-01-27 11:34:46,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 11:35:34] 2026-01-27 11:34:46,769 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 11:35:34] 2026-01-27 11:34:46,769 | INFO     | update_server=False
[2026-01-27 11:35:34] 2026-01-27 11:34:46,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 11:35:34] 2026-01-27 11:34:46,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 11:35:34] 2026-01-27 11:34:47,457 | INFO     | all data control threads have been joined
[2026-01-27 11:35:34] 2026-01-27 11:34:47,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 11:35:34] 2026-01-27 11:34:47,492 | INFO     | aborting loop
[2026-01-27 11:35:34] 2026-01-27 11:34:47,556 | INFO     | all payload control threads have been joined
[2026-01-27 11:35:34] 2026-01-27 11:34:47,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 11:35:34] 2026-01-27 11:34:47,774 | INFO     | [job] retrieve thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,047 | INFO     | [payload] validate_post thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,326 | INFO     | [data] copytool_in thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,356 | INFO     | all job control threads have been joined
[2026-01-27 11:35:34] 2026-01-27 11:34:48,462 | INFO     | [data] control thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,472 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,497 | INFO     | [job] job monitor thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,561 | INFO     | [payload] control thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,691 | INFO     | [payload] failed_post thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,769 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:48,769 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:49,077 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:49,148 | INFO     | [job] validate thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:49,361 | INFO     | [job] control thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:49,762 | INFO     | [data] copytool_out thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:49,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 11:35:34] 2026-01-27 11:34:50,775 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:34:50,780 | INFO     | [job] queue monitor thread has finished
[2026-01-27 11:35:34] 2026-01-27 11:35:16,943 | INFO     | PID=177211 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 11:35:34] 2026-01-27 11:35:16,943 | INFO     | .. there are 2 such processes running
[2026-01-27 11:35:34] 2026-01-27 11:35:16,943 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 11:35:34] 2026-01-27 11:35:16,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 11:35:34] 2026-01-27 11:35:16,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 11:35:34] 2026-01-27 11:35:28,099 | INFO     | [monitor] cgroup control has ended
[2026-01-27 11:35:34] 2026-01-27 11:35:29,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125377337575232)>', '<ExcThread(monitor, started 125376403601152)>']
[2026-01-27 11:35:34] 2026-01-27 11:35:30,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 11:35:34] 2026-01-27 11:35:30,023 | INFO     | [monitor] control thread has ended
[2026-01-27 11:35:34] 2026-01-27 11:35:34,129 | INFO     | all workflow threads have been joined
[2026-01-27 11:35:34] 2026-01-27 11:35:34,129 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 11:35:34] 2026-01-27 11:35:34,129 | INFO     | traces error code: 0
[2026-01-27 11:35:34] 2026-01-27 11:35:34,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 11:35:34] 2026-01-27 11:35:34,312 [wrapper] ==== pilot stdout END ====
[2026-01-27 11:35:34] 2026-01-27 11:35:34,315 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 11:35:34] 2026-01-27 11:35:34,318 [wrapper] pilotpid: 177211
[2026-01-27 11:35:34] 2026-01-27 11:35:34,320 [wrapper] Pilot exit status: 0
[2026-01-27 11:35:34] 2026-01-27 11:35:34,339 [wrapper] pandaids: 6980224216
[2026-01-27 11:35:34] 2026-01-27 11:35:34,373 [wrapper] cleanup supervisor_pilot  201927 177212
[2026-01-27 11:35:34] 2026-01-27 11:35:34,376 [wrapper] Test setup, not cleaning
[2026-01-27 11:35:34] 2026-01-27 11:35:34,379 [wrapper] apfmon messages muted
[2026-01-27 11:35:34] 2026-01-27 11:35:34,387 [wrapper] ==== wrapper stdout END ====
[2026-01-27 11:35:34] 2026-01-27 11:35:34,389 [wrapper] ==== wrapper stderr END ====
[2026-01-27 11:35:34]  *** Error codes and diagnostics ***
[2026-01-27 11:35:34]     "exeErrorCode": 0,
[2026-01-27 11:35:34]     "exeErrorDiag": "",
[2026-01-27 11:35:34]     "pilotErrorCode": 0,
[2026-01-27 11:35:34]     "pilotErrorDiag": "",
[2026-01-27 11:35:34]  *** Listing of results directory ***
[2026-01-27 11:35:34] total 434940
[2026-01-27 11:35:34] -rw-r--r-- 1 boinc boinc    584422 Jan 24 01:50 pilot3.tar.gz
[2026-01-27 11:35:34] -rw-r--r-- 1 boinc boinc      5111 Jan 24 01:50 queuedata.json
[2026-01-27 11:35:34] -rwx------ 1 boinc boinc     36322 Jan 24 01:51 runpilot2-wrapper.sh
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc       100 Jan 27 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 11:35:34] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 05:28 run_atlas
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc       105 Jan 27 05:28 job.xml
[2026-01-27 11:35:34] -rw-r--r-- 2 boinc boinc 255160984 Jan 27 05:28 EVNT.48314249._000005.pool.root.1
[2026-01-27 11:35:34] drwxrwx--x 2 boinc boinc      4096 Jan 27 05:28 shared
[2026-01-27 11:35:34] -rw-r--r-- 2 boinc boinc    597771 Jan 27 05:28 input.tar.gz
[2026-01-27 11:35:34] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:28 start_atlas.sh
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc      9312 Jan 27 05:28 init_data.xml
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc         0 Jan 27 05:28 boinc_setup_complete
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc         0 Jan 27 05:28 boinc_lockfile
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc      2628 Jan 27 05:28 pandaJob.out
[2026-01-27 11:35:34] -rw------- 1 boinc boinc   1004335 Jan 27 05:28 agis_schedconf.cvmfs.json
[2026-01-27 11:35:34] -rw------- 1 boinc boinc       413 Jan 27 05:28 workernode_map.json
[2026-01-27 11:35:34] drwx------ 5 boinc boinc      4096 Jan 27 05:28 pilot3
[2026-01-27 11:35:34] -rw------- 1 boinc boinc 178710638 Jan 27 11:33 HITS.48314251._000172.pool.root.1
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc       530 Jan 27 11:33 boinc_task_state.xml
[2026-01-27 11:35:34] -rw------- 1 boinc boinc        95 Jan 27 11:34 pilot_heartbeat.json
[2026-01-27 11:35:34] -rw------- 1 boinc boinc      1022 Jan 27 11:34 memory_monitor_summary.json
[2026-01-27 11:35:34] -rw------- 1 boinc boinc   1516246 Jan 27 11:34 agis_ddmendpoints.agis.ALL.json
[2026-01-27 11:35:34] -rw------- 1 boinc boinc    642253 Jan 27 11:34 log.48314251._000172.job.log.tgz.1
[2026-01-27 11:35:34] -rw------- 1 boinc boinc      6283 Jan 27 11:34 heartbeat.json
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 11:35 boinc_mmap_file
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc        28 Jan 27 11:35 wrapper_checkpoint.txt
[2026-01-27 11:35:34] -rw------- 1 boinc boinc      4842 Jan 27 11:35 pilotlog.txt
[2026-01-27 11:35:34] -rw------- 1 boinc boinc   3136487 Jan 27 11:35 log.48314251._000172.job.log.1
[2026-01-27 11:35:34] -rw------- 1 boinc boinc       357 Jan 27 11:35 output.list
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc       620 Jan 27 11:35 runtime_log
[2026-01-27 11:35:34] -rw------- 1 boinc boinc   3799040 Jan 27 11:35 result.tar.gz
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc      9147 Jan 27 11:35 runtime_log.err
[2026-01-27 11:35:34] -rw------- 1 boinc boinc       651 Jan 27 11:35 JuRLDm3yh38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmPxKDmmBnVon.diag
[2026-01-27 11:35:34] -rw-rw-r-- 1 boinc boinc     20850 Jan 27 11:35 stderr.txt
[2026-01-27 11:35:34] HITS file was successfully produced:
[2026-01-27 11:35:34] -rw------- 1 boinc boinc 178710638 Jan 27 11:33 shared/HITS.pool.root.1
[2026-01-27 11:35:34]  *** Contents of shared directory: ***
[2026-01-27 11:35:34] total 428028
[2026-01-27 11:35:34] -rw-r--r-- 2 boinc boinc 255160984 Jan 27 05:28 ATLAS.root_0
[2026-01-27 11:35:34] -rw-r--r-- 2 boinc boinc    597771 Jan 27 05:28 input.tar.gz
[2026-01-27 11:35:34] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:28 start_atlas.sh
[2026-01-27 11:35:34] -rw------- 1 boinc boinc 178710638 Jan 27 11:33 HITS.pool.root.1
[2026-01-27 11:35:34] -rw------- 1 boinc boinc   3799040 Jan 27 11:35 result.tar.gz
11:35:36 (173201): run_atlas exited; CPU time 43558.226270
11:35:36 (173201): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN