Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:59 (1922724): wrapper (7.7.26015): starting
23:31:59 (1922724): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 23:31:59] Arguments: --nthreads 4
[2026-01-26 23:31:59] Threads: 4
[2026-01-26 23:31:59] Checking for CVMFS
[2026-01-26 23:31:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 23:31:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 23:31:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 23:31:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 23:31:59] 2.13.3.0 897907 8259 57068 155545 1 188 3882185 6144001 2664 130560 0 12242643 99.980 464946 112 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-26 23:31:59] CVMFS is ok
[2026-01-26 23:31:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 23:31:59] Checking for apptainer binary...
[2026-01-26 23:31:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 23:31:59] Running /usr/bin/apptainer --version
[2026-01-26 23:31:59] apptainer version 1.4.0
[2026-01-26 23:31:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 23:32:00] Zen
[2026-01-26 23:32:00] apptainer works
[2026-01-26 23:32:00] Set ATHENA_PROC_NUMBER=4
[2026-01-26 23:32:00] Set ATHENA_CORE_NUMBER=4
[2026-01-26 23:32:00] Starting ATLAS job with PandaID=6983305171
[2026-01-26 23:32:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:28:29]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:28:29] 2026-01-26 14:27:48,163 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 01:28:29] 2026-01-26 14:27:48,223 | INFO     | job 6983305171 has state=finished
[2026-01-27 01:28:29] 2026-01-26 14:27:48,223 | INFO     | preparing for final server update for job 6983305171 in state='finished'
[2026-01-27 01:28:29] 2026-01-26 14:27:48,223 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6983305171/jobReport.json
[2026-01-27 01:28:29] 2026-01-26 14:27:48,225 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/1/workernode_map.json
[2026-01-27 01:28:29] 2026-01-26 14:27:48,225 | INFO     | this job has now completed (state=finished)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,225 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,225 | INFO     | log transfer has been attempted: DONE
[2026-01-27 01:28:29] 2026-01-26 14:27:48,225 | INFO     | job 6983305171 has finished - writing final server update
[2026-01-27 01:28:29] 2026-01-26 14:27:48,225 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,228 | INFO     | using path: /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6983305171/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,229 | INFO     | extracted standard info from prmon json
[2026-01-27 01:28:29] 2026-01-26 14:27:48,229 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:28:29] 2026-01-26 14:27:48,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:28:29] 2026-01-26 14:27:48,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:28:29] 2026-01-26 14:27:48,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | sum of square deviations: 459366752.5
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | sum of deviations: 15205979045.000008
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | mean x: 1769434195.5
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | mean y: 2291572.01754386
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | intersect: -58569599301.34174
[2026-01-27 01:28:29] 2026-01-26 14:27:48,231 | INFO     | chi2: 1.8659673486331305
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | sum of square deviations: 401533110.0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | sum of deviations: 14508630400.000002
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | mean x: 1769434043.0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | mean y: 2289730.4403669727
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | intersect: -63932822736.5358
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | chi2: 1.8702751655030052
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | current chi2=1.8702751655030052 (change=-0.23086239279750953 %)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | right removable region: 108
[2026-01-27 01:28:29] 2026-01-26 14:27:48,232 | INFO     | sum of square deviations: 401533110.0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | sum of deviations: -4145738607.9999995
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | mean x: 1769434348.0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | mean y: 2341770.4220183487
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | intersect: 18271351493.74199
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | chi2: 0.015895755071400827
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | current chi2=0.015895755071400827 (change=99.1481225497839 %)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,233 | INFO     | sum of square deviations: 348769330.0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | sum of deviations: -3391676707.4999995
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | mean x: 1769434500.5
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | mean y: 2339574.7596153845
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | intersect: 17209557252.96758
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | chi2: 0.015572299650800456
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | current chi2=0.015572299650800456 (change=2.0348540798940857 %)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | left removable region: 20
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | sum of square deviations: 211285822.0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | sum of deviations: -971994892.5000005
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | mean x: 1769434622.5
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | mean y: 2331449.5795454546
[2026-01-27 01:28:29] 2026-01-26 14:27:48,234 | INFO     | intersect: 8142401613.315693
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | chi2: 0.00916896212773317
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | current memory leak: -4.60 B/s (using 88 data points, chi2=0.01)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | could have reported an average CPU frequency of 4138 MHz (7 samples)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | ..............................
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . Timing measurements:
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . get job = 0 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . initial setup = 7 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . payload setup = 3 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . stage-in = 0 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . payload execution = 6914 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . stage-out = 0 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | . log creation = 0 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,235 | INFO     | ..............................
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | 
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | job summary report
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | --------------------------------------------------
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | PanDA job id: 6983305171
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | task id: 48318042
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | errors: (none)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | pilot state: finished 
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | transexitcode: 0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | exeerrorcode: 0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | exeerrordiag: 
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | exitcode: 0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | exitmsg: OK
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | cpuconsumptiontime: 26566 s
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | nevents: 400
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | neventsw: 0
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | pid: 1931063
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | pgrp: 1931063
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | corecount: 4
[2026-01-27 01:28:29] 2026-01-26 14:27:48,291 | INFO     | event service: False
[2026-01-27 01:28:29] 2026-01-26 14:27:48,292 | INFO     | sizes: {0: 2284262, 11: 2284262, 6921: 2311532, 6922: 2320552, 6925: 2320802}
[2026-01-27 01:28:29] 2026-01-26 14:27:48,292 | INFO     | --------------------------------------------------
[2026-01-27 01:28:29] 2026-01-26 14:27:48,292 | INFO     | 
[2026-01-27 01:28:29] 2026-01-26 14:27:48,292 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2026-01-27 01:28:29] 2026-01-26 14:27:48,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,319 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,319 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:28:29] 2026-01-26 14:27:48,319 | INFO     | job 6983305171 has completed (purged errors)
[2026-01-27 01:28:29] 2026-01-26 14:27:48,319 | INFO     | overall cleanup function is called
[2026-01-27 01:28:29] 2026-01-26 14:27:49,326 | INFO     | --- collectZombieJob: --- 10, [1931063]
[2026-01-27 01:28:29] 2026-01-26 14:27:49,327 | INFO     | zombie collector waiting for pid 1931063
[2026-01-27 01:28:29] 2026-01-26 14:27:49,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:28:29] 2026-01-26 14:27:49,327 | INFO     | collected zombie processes
[2026-01-27 01:28:29] 2026-01-26 14:27:49,327 | INFO     | will attempt to kill all subprocesses of pid=1931063
[2026-01-27 01:28:29] 2026-01-26 14:27:49,448 | INFO     | process IDs to be killed: [1931063] (in reverse order)
[2026-01-27 01:28:29] 2026-01-26 14:27:49,499 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:28:29] 2026-01-26 14:27:49,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:28:29] 2026-01-26 14:27:49,503 | INFO     | did not find any defunct processes belonging to 1931063
[2026-01-27 01:28:29] 2026-01-26 14:27:49,506 | INFO     | did not find any defunct processes belonging to 1931063
[2026-01-27 01:28:29] 2026-01-26 14:27:49,506 | INFO     | ready for new job
[2026-01-27 01:28:29] 2026-01-26 14:27:49,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:28:29] 2026-01-26 14:27:49,508 | INFO     | **************************************
[2026-01-27 01:28:29] 2026-01-26 14:27:49,508 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:28:29] 2026-01-26 14:27:49,508 | INFO     | **************************************
[2026-01-27 01:28:29] 2026-01-26 14:27:49,508 | INFO     | 
[2026-01-27 01:28:29] 2026-01-26 14:27:49,509 | INFO     | architecture information:
[2026-01-27 01:28:29] 2026-01-26 14:27:49,510 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:28:29] 2026-01-26 14:27:49,521 | INFO     | cat /etc/os-release:
[2026-01-27 01:28:29] NAME="CentOS Linux"
[2026-01-27 01:28:29] VERSION="7 (Core)"
[2026-01-27 01:28:29] ID="centos"
[2026-01-27 01:28:29] ID_LIKE="rhel fedora"
[2026-01-27 01:28:29] VERSION_ID="7"
[2026-01-27 01:28:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:28:29] ANSI_COLOR="0;31"
[2026-01-27 01:28:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:28:29] HOME_URL="https://www.centos.org/"
[2026-01-27 01:28:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:28:29] 
[2026-01-27 01:28:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:28:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:28:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:28:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:28:29] 
[2026-01-27 01:28:29] 2026-01-26 14:27:49,522 | INFO     | **************************************
[2026-01-27 01:28:29] 2026-01-26 14:27:50,025 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2026-01-27 01:28:29] 2026-01-26 14:27:50,039 | INFO     | sufficient remaining disk space (196664623104 B)
[2026-01-27 01:28:29] 2026-01-26 14:27:50,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:28:29] 2026-01-26 14:27:50,040 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:28:29] 2026-01-26 14:27:50,040 | INFO     | update_server=False
[2026-01-27 01:28:29] 2026-01-26 14:27:50,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:28:29] 2026-01-26 14:27:50,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:28:29] 2026-01-26 14:27:50,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:28:29] 2026-01-26 14:27:50,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:28:29] 2026-01-26 14:27:50,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:28:29] 2026-01-26 14:27:50,576 | INFO     | aborting loop
[2026-01-27 01:28:29] 2026-01-26 14:27:50,925 | INFO     | all payload control threads have been joined
[2026-01-27 01:28:29] 2026-01-26 14:27:50,953 | INFO     | all data control threads have been joined
[2026-01-27 01:28:29] 2026-01-26 14:27:51,045 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:51,045 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:51,113 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:51,260 | INFO     | all job control threads have been joined
[2026-01-27 01:28:29] 2026-01-26 14:27:51,574 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:51,581 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:51,926 | INFO     | [payload] control thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:51,958 | INFO     | [data] control thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,063 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,077 | INFO     | [job] validate thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,082 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,224 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,265 | INFO     | [job] control thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,325 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:52,479 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:27:54,045 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:28:00,973 | INFO     | job.realtimelogging is not enabled
[2026-01-27 01:28:29] 2026-01-26 14:28:01,978 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:28:29] 2026-01-26 14:28:19,725 | INFO     | PID=1926541 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 01:28:29] 2026-01-26 14:28:19,725 | INFO     | .. there are 4 such processes running
[2026-01-27 01:28:29] 2026-01-26 14:28:19,726 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:28:29] 2026-01-26 14:28:19,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:28:29] 2026-01-26 14:28:19,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:28:29] 2026-01-26 14:28:22,928 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:28:29] 2026-01-26 14:28:24,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129120482223936)>', '<ExcThread(monitor, started 129119845074688)>']
[2026-01-27 01:28:29] 2026-01-26 14:28:24,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:28:29] 2026-01-26 14:28:24,751 | INFO     | [monitor] control thread has ended
[2026-01-27 01:28:29] 2026-01-26 14:28:29,331 | INFO     | all workflow threads have been joined
[2026-01-27 01:28:29] 2026-01-26 14:28:29,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:28:29] 2026-01-26 14:28:29,331 | INFO     | traces error code: 0
[2026-01-27 01:28:29] 2026-01-26 14:28:29,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:28:29] 2026-01-26 14:28:29,411 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:28:29] 2026-01-26 14:28:29,413 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:28:29] 2026-01-26 14:28:29,415 [wrapper] pilotpid: 1926541
[2026-01-27 01:28:29] 2026-01-26 14:28:29,417 [wrapper] Pilot exit status: 0
[2026-01-27 01:28:29] 2026-01-26 14:28:29,424 [wrapper] pandaids: 6983305171
[2026-01-27 01:28:29] 2026-01-26 14:28:29,459 [wrapper] cleanup supervisor_pilot 2037780 1926542
[2026-01-27 01:28:29] 2026-01-26 14:28:29,462 [wrapper] Test setup, not cleaning
[2026-01-27 01:28:29] 2026-01-26 14:28:29,464 [wrapper] apfmon messages muted
[2026-01-27 01:28:29] 2026-01-26 14:28:29,466 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:28:29] 2026-01-26 14:28:29,468 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:28:29]  *** Error codes and diagnostics ***
[2026-01-27 01:28:29]     "exeErrorCode": 0,
[2026-01-27 01:28:29]     "exeErrorDiag": "",
[2026-01-27 01:28:29]     "pilotErrorCode": 0,
[2026-01-27 01:28:29]     "pilotErrorDiag": "",
[2026-01-27 01:28:29]  *** Listing of results directory ***
[2026-01-27 01:28:29] total 679672
[2026-01-27 01:28:29] -rw-r--r-- 1 michael michael    584422 Jan 26 03:28 pilot3.tar.gz
[2026-01-27 01:28:29] -rwx------ 1 michael michael     36322 Jan 26 03:32 runpilot2-wrapper.sh
[2026-01-27 01:28:29] -rw-r--r-- 1 michael michael      5111 Jan 26 03:35 queuedata.json
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael       100 Jan 26 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:28:29] -rwxr-xr-x 1 michael michael      7986 Jan 26 23:31 run_atlas
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael       105 Jan 26 23:31 job.xml
[2026-01-27 01:28:29] -rw-r--r-- 2 michael michael 501759829 Jan 26 23:31 EVNT.48318040._000022.pool.root.1
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael      9823 Jan 26 23:31 init_data.xml
[2026-01-27 01:28:29] drwxrwx--x 2 michael michael      4096 Jan 26 23:31 shared
[2026-01-27 01:28:29] -rw-r--r-- 2 michael michael    597770 Jan 26 23:31 input.tar.gz
[2026-01-27 01:28:29] -rw-r--r-- 2 michael michael     15845 Jan 26 23:31 start_atlas.sh
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael         0 Jan 26 23:31 boinc_lockfile
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael      2533 Jan 26 23:32 pandaJob.out
[2026-01-27 01:28:29] -rw------- 1 michael michael        50 Jan 26 23:32 setup.sh.local
[2026-01-27 01:28:29] -rw------- 1 michael michael   1002189 Jan 26 23:32 agis_schedconf.cvmfs.json
[2026-01-27 01:28:29] -rw------- 1 michael michael   1516246 Jan 26 23:32 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:28:29] -rw------- 1 michael michael       417 Jan 26 23:32 workernode_map.json
[2026-01-27 01:28:29] drwx------ 5 michael michael      4096 Jan 26 23:32 pilot3
[2026-01-27 01:28:29] -rw------- 1 michael michael 187588675 Jan 27 01:27 HITS.48318042._001084.pool.root.1
[2026-01-27 01:28:29] -rw------- 1 michael michael      1037 Jan 27 01:27 memory_monitor_summary.json
[2026-01-27 01:28:29] -rw------- 1 michael michael    315897 Jan 27 01:27 log.48318042._001084.job.log.tgz.1
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael       530 Jan 27 01:27 boinc_task_state.xml
[2026-01-27 01:28:29] -rw------- 1 michael michael      6262 Jan 27 01:27 heartbeat.json
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael      8192 Jan 27 01:28 boinc_mmap_file
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael        27 Jan 27 01:28 wrapper_checkpoint.txt
[2026-01-27 01:28:29] -rw------- 1 michael michael        95 Jan 27 01:28 pilot_heartbeat.json
[2026-01-27 01:28:29] -rw------- 1 michael michael      4903 Jan 27 01:28 pilotlog.txt
[2026-01-27 01:28:29] -rw------- 1 michael michael   1024853 Jan 27 01:28 log.48318042._001084.job.log.1
[2026-01-27 01:28:29] -rw------- 1 michael michael       357 Jan 27 01:28 output.list
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael       620 Jan 27 01:28 runtime_log
[2026-01-27 01:28:29] -rw------- 1 michael michael   1361920 Jan 27 01:28 result.tar.gz
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael      9444 Jan 27 01:28 runtime_log.err
[2026-01-27 01:28:29] -rw------- 1 michael michael       641 Jan 27 01:28 P2iNDm5CI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmu27KDmQbApTo.diag
[2026-01-27 01:28:29] -rw-rw-r-- 1 michael michael     20977 Jan 27 01:28 stderr.txt
[2026-01-27 01:28:29] HITS file was successfully produced:
[2026-01-27 01:28:29] -rw------- 1 michael michael 187588675 Jan 27 01:27 shared/HITS.pool.root.1
[2026-01-27 01:28:29]  *** Contents of shared directory: ***
[2026-01-27 01:28:29] total 675136
[2026-01-27 01:28:29] -rw-r--r-- 2 michael michael 501759829 Jan 26 23:31 ATLAS.root_0
[2026-01-27 01:28:29] -rw-r--r-- 2 michael michael    597770 Jan 26 23:31 input.tar.gz
[2026-01-27 01:28:29] -rw-r--r-- 2 michael michael     15845 Jan 26 23:31 start_atlas.sh
[2026-01-27 01:28:29] -rw------- 1 michael michael 187588675 Jan 27 01:27 HITS.pool.root.1
[2026-01-27 01:28:29] -rw------- 1 michael michael   1361920 Jan 27 01:28 result.tar.gz
01:28:31 (1922724): run_atlas exited; CPU time 26648.998599
01:28:31 (1922724): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN