Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:05:24 (2512956): wrapper (7.7.26015): starting
16:05:24 (2512956): wrapper: running run_atlas (--nthreads 3)
[2026-01-26 16:05:24] Arguments: --nthreads 3
[2026-01-26 16:05:24] Threads: 3
[2026-01-26 16:05:24] Checking for CVMFS
[2026-01-26 16:05:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:05:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:05:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:05:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:05:25] 2.9.2.0 1281698 8558 93184 155549 2 50 17970916 36864000 0 130560 0 3610413 99.987 265802 5441 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 16:05:25] CVMFS is ok
[2026-01-26 16:05:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:05:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:05:25] Further information can be found at the LHC@home message board.
[2026-01-26 16:05:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:05:25] Checking for apptainer binary...
[2026-01-26 16:05:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:05:25] Running /usr/bin/apptainer --version
[2026-01-26 16:05:25] apptainer version 1.4.1-1.1
[2026-01-26 16:05:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:05:25] thA371a
[2026-01-26 16:05:25] apptainer works
[2026-01-26 16:05:25] Set ATHENA_PROC_NUMBER=3
[2026-01-26 16:05:25] Set ATHENA_CORE_NUMBER=3
[2026-01-26 16:05:25] Starting ATLAS job with PandaID=6983304938
[2026-01-26 16:05:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:36:07]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:36:07] 2026-01-26 16:35:37,126 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:36:07] 2026-01-26 16:35:37,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:36:07] 2026-01-26 16:35:37,128 | INFO     | did not find any defunct processes belonging to 2521422
[2026-01-26 17:36:07] 2026-01-26 16:35:37,129 | INFO     | did not find any defunct processes belonging to 2521422
[2026-01-26 17:36:07] 2026-01-26 16:35:37,129 | INFO     | ready for new job
[2026-01-26 17:36:07] 2026-01-26 16:35:37,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:36:07] 2026-01-26 16:35:37,130 | INFO     | **************************************
[2026-01-26 17:36:07] 2026-01-26 16:35:37,130 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:36:07] 2026-01-26 16:35:37,130 | INFO     | **************************************
[2026-01-26 17:36:07] 2026-01-26 16:35:37,130 | INFO     | 
[2026-01-26 17:36:07] 2026-01-26 16:35:37,130 | INFO     | architecture information:
[2026-01-26 17:36:07] 2026-01-26 16:35:37,130 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:36:07] 2026-01-26 16:35:37,139 | INFO     | cat /etc/os-release:
[2026-01-26 17:36:07] NAME="CentOS Linux"
[2026-01-26 17:36:07] VERSION="7 (Core)"
[2026-01-26 17:36:07] ID="centos"
[2026-01-26 17:36:07] ID_LIKE="rhel fedora"
[2026-01-26 17:36:07] VERSION_ID="7"
[2026-01-26 17:36:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:36:07] ANSI_COLOR="0;31"
[2026-01-26 17:36:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:36:07] HOME_URL="https://www.centos.org/"
[2026-01-26 17:36:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:36:07] 
[2026-01-26 17:36:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:36:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:36:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:36:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:36:07] 
[2026-01-26 17:36:07] 2026-01-26 16:35:37,139 | INFO     | **************************************
[2026-01-26 17:36:07] 2026-01-26 16:35:37,642 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 17:36:07] 2026-01-26 16:35:37,654 | INFO     | sufficient remaining disk space (236708691968 B)
[2026-01-26 17:36:07] 2026-01-26 16:35:37,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:36:07] 2026-01-26 16:35:37,654 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:36:07] 2026-01-26 16:35:37,654 | INFO     | update_server=False
[2026-01-26 17:36:07] 2026-01-26 16:35:37,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:36:07] 2026-01-26 16:35:37,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:36:07] 2026-01-26 16:35:37,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:36:07] 2026-01-26 16:35:37,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:36:07] 2026-01-26 16:35:37,983 | INFO     | all job control threads have been joined
[2026-01-26 17:36:07] 2026-01-26 16:35:38,056 | INFO     | all data control threads have been joined
[2026-01-26 17:36:07] 2026-01-26 16:35:38,191 | INFO     | all payload control threads have been joined
[2026-01-26 17:36:07] 2026-01-26 16:35:38,660 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:38,660 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:38,989 | INFO     | [job] control thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,062 | INFO     | [data] control thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,197 | INFO     | [payload] control thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,236 | INFO     | [job] validate thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,342 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,342 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,413 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,474 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,741 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:39,917 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:40,248 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:40,310 | WARNING  | process 2521422 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:36:07] 2026-01-26 16:35:40,338 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:36:07] 2026-01-26 16:35:40,373 | INFO     | number of running child processes to parent process 2521422: 1
[2026-01-26 17:36:07] 2026-01-26 16:35:40,373 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:36:07] 2026-01-26 16:35:40,373 | INFO     | aborting job monitoring since job object (job id=6983304938) has expired
[2026-01-26 17:36:07] 2026-01-26 16:35:40,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:36:07] 2026-01-26 16:35:40,373 | INFO     | will abort loop
[2026-01-26 17:36:07] 2026-01-26 16:35:40,397 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:36:07] 2026-01-26 16:35:40,723 | INFO     | job.realtimelogging is not enabled
[2026-01-26 17:36:07] 2026-01-26 16:35:41,379 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:41,658 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:41,729 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:36:07] 2026-01-26 16:35:42,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273775286080)>', '<ExcThread(monitor, started 140273162123008)>']
[2026-01-26 17:36:07] 2026-01-26 16:35:47,405 | INFO     | all workflow threads have been joined
[2026-01-26 17:36:07] 2026-01-26 16:35:47,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:36:07] 2026-01-26 16:35:47,405 | INFO     | traces error code: 0
[2026-01-26 17:36:07] 2026-01-26 16:35:47,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:36:07] 2026-01-26 16:36:07,218 | INFO     | PID=2516995 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 17:36:07] 2026-01-26 16:36:07,219 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:36:07] 2026-01-26 16:36:07,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:36:07] 2026-01-26 16:36:07,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:36:07] 2026-01-26 16:36:07,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:36:07] 2026-01-26 16:36:07,219 | INFO     | [monitor] control thread has ended
[2026-01-26 17:36:07] 2026-01-26 16:36:07,265 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:36:07] 2026-01-26 16:36:07,267 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:36:07] 2026-01-26 16:36:07,270 [wrapper] pilotpid: 2516995
[2026-01-26 17:36:07] 2026-01-26 16:36:07,272 [wrapper] Pilot exit status: 0
[2026-01-26 17:36:07] 2026-01-26 16:36:07,279 [wrapper] pandaids: 6983304938
[2026-01-26 17:36:07] 2026-01-26 16:36:07,294 [wrapper] cleanup supervisor_pilot 2526659 2516996
[2026-01-26 17:36:07] 2026-01-26 16:36:07,296 [wrapper] Test setup, not cleaning
[2026-01-26 17:36:07] 2026-01-26 16:36:07,298 [wrapper] apfmon messages muted
[2026-01-26 17:36:07] 2026-01-26 16:36:07,300 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:36:07] 2026-01-26 16:36:07,302 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:36:07]  *** Error codes and diagnostics ***
[2026-01-26 17:36:07]     "exeErrorCode": 0,
[2026-01-26 17:36:07]     "exeErrorDiag": "",
[2026-01-26 17:36:07]     "pilotErrorCode": 0,
[2026-01-26 17:36:07]     "pilotErrorDiag": "",
[2026-01-26 17:36:07]  *** Listing of results directory ***
[2026-01-26 17:36:07] total 672532
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc    584422 Jan 25 17:28 pilot3.tar.gz
[2026-01-26 17:36:07] -rwx------ 1 boinc boinc     36322 Jan 25 17:32 runpilot2-wrapper.sh
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc      5111 Jan 25 17:35 queuedata.json
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc       100 Jan 26 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:36:07] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:05 run_atlas
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc       105 Jan 26 16:05 job.xml
[2026-01-26 17:36:07] -rw-r--r-- 2 boinc boinc 496698676 Jan 26 16:05 EVNT.48318040._000018.pool.root.1
[2026-01-26 17:36:07] -rw-r--r-- 2 boinc boinc    597766 Jan 26 16:05 input.tar.gz
[2026-01-26 17:36:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:05 start_atlas.sh
[2026-01-26 17:36:07] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:05 shared
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:05 boinc_setup_complete
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc      6440 Jan 26 16:05 init_data.xml
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:05 boinc_lockfile
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc      2531 Jan 26 16:05 pandaJob.out
[2026-01-26 17:36:07] -rw------- 1 boinc boinc   1002189 Jan 26 16:05 agis_schedconf.cvmfs.json
[2026-01-26 17:36:07] -rw------- 1 boinc boinc   1516246 Jan 26 16:05 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:36:07] -rw------- 1 boinc boinc       427 Jan 26 16:05 workernode_map.json
[2026-01-26 17:36:07] drwx------ 5 boinc boinc      4096 Jan 26 16:05 pilot3
[2026-01-26 17:36:07] -rw------- 1 boinc boinc 185896868 Jan 26 17:35 HITS.48318042._000897.pool.root.1
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc       530 Jan 26 17:35 boinc_task_state.xml
[2026-01-26 17:36:07] -rw------- 1 boinc boinc      1019 Jan 26 17:35 memory_monitor_summary.json
[2026-01-26 17:36:07] -rw------- 1 boinc boinc    288175 Jan 26 17:35 log.48318042._000897.job.log.tgz.1
[2026-01-26 17:36:07] -rw------- 1 boinc boinc      6307 Jan 26 17:35 heartbeat.json
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc      8192 Jan 26 17:36 boinc_mmap_file
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc        27 Jan 26 17:36 wrapper_checkpoint.txt
[2026-01-26 17:36:07] -rw------- 1 boinc boinc       747 Jan 26 17:36 pilotlog.txt
[2026-01-26 17:36:07] -rw------- 1 boinc boinc        95 Jan 26 17:36 pilot_heartbeat.json
[2026-01-26 17:36:07] -rw------- 1 boinc boinc    786511 Jan 26 17:36 log.48318042._000897.job.log.1
[2026-01-26 17:36:07] -rw------- 1 boinc boinc       357 Jan 26 17:36 output.list
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc       620 Jan 26 17:36 runtime_log
[2026-01-26 17:36:07] -rw------- 1 boinc boinc   1095680 Jan 26 17:36 result.tar.gz
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc      8901 Jan 26 17:36 runtime_log.err
[2026-01-26 17:36:07] -rw------- 1 boinc boinc       658 Jan 26 17:36 hsuLDm5CI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV17KDmv4dFLo.diag
[2026-01-26 17:36:07] -rw-r--r-- 1 boinc boinc     10695 Jan 26 17:36 stderr.txt
[2026-01-26 17:36:07] HITS file was successfully produced:
[2026-01-26 17:36:07] -rw------- 1 boinc boinc 185896868 Jan 26 17:35 shared/HITS.pool.root.1
[2026-01-26 17:36:07]  *** Contents of shared directory: ***
[2026-01-26 17:36:07] total 668280
[2026-01-26 17:36:07] -rw-r--r-- 2 boinc boinc 496698676 Jan 26 16:05 ATLAS.root_0
[2026-01-26 17:36:07] -rw-r--r-- 2 boinc boinc    597766 Jan 26 16:05 input.tar.gz
[2026-01-26 17:36:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:05 start_atlas.sh
[2026-01-26 17:36:07] -rw------- 1 boinc boinc 185896868 Jan 26 17:35 HITS.pool.root.1
[2026-01-26 17:36:07] -rw------- 1 boinc boinc   1095680 Jan 26 17:36 result.tar.gz
17:36:09 (2512956): run_atlas exited; CPU time 15564.239844
17:36:09 (2512956): called boinc_finish(0)

</stderr_txt>
]]>

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