Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:03:06 (869169): wrapper (7.7.26015): starting
13:03:06 (869169): wrapper: running run_atlas (--nthreads 12)
[2026-01-25 13:03:06] Arguments: --nthreads 12
[2026-01-25 13:03:06] Threads: 12
[2026-01-25 13:03:06] Checking for CVMFS
[2026-01-25 13:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 13:03:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 13:03:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 13:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 13:03:06] 2.11.5.0 3459277 80106 371672 155520 2 625 31186589 45568001 29523 130560 0 616534250 99.784 401777301 21225 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-25 13:03:06] CVMFS is ok
[2026-01-25 13:03:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 13:03:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 13:03:06] Further information can be found at the LHC@home message board.
[2026-01-25 13:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 13:03:06] Checking for apptainer binary...
[2026-01-25 13:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 13:03:06] Running /usr/bin/apptainer --version
[2026-01-25 13:03:06] apptainer version 1.4.1-1.el9
[2026-01-25 13:03:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 13:03:07] wns0066.triumf.lcg
[2026-01-25 13:03:07] apptainer works
[2026-01-25 13:03:07] Set ATHENA_PROC_NUMBER=12
[2026-01-25 13:03:07] Set ATHENA_CORE_NUMBER=12
[2026-01-25 13:03:07] Starting ATLAS job with PandaID=6983305017
[2026-01-25 13:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 13:06:57]  *** The last 200 lines of the pilot log: ***
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | WARNING  | wrong length of table data, x=[1769375042.0], y=[1140.0] (must be same and length>=4)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | could have reported an average CPU frequency of 2761 MHz (4 samples)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | ..............................
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | . Timing measurements:
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . get job = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . initial setup = 13 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . payload setup = 11 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . stage-in = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . payload execution = 32 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . stage-out = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . log creation = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | ..............................
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6983305017/pilotlog.txt
[2026-01-25 13:06:57] 2026-01-25 21:06:24,398 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-25 13:06:57] - Log from pilotlog.txt -
[2026-01-25 13:06:57] 2026-01-25 21:06:24,328 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 13:06:57] 2026-01-25 21:06:24,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | WARNING  | found no stored workdir sizes
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | INFO     | will not add max space = 0 B to job metrics
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | WARNING  | wrong length of table data, x=[1769375042.0], y=[1140.0] (must be same and length>=4)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | could have reported an average CPU frequency of 2761 MHz (4 samples)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | ..............................
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | . Timing measurements:
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . get job = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . initial setup = 13 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . payload setup = 11 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . stage-in = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . payload execution = 32 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . stage-out = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . log creation = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | ..............................
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6983305017/pilotlog.txt
[2026-01-25 13:06:57] 2026-01-25 21:06:24,398 | WARNING  | 
[2026-01-25 13:06:57] [begin log extracts]
[2026-01-25 13:06:57] - Log from pilotlog.txt -
[2026-01-25 13:06:57] 2026-01-25 21:06:24,328 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 13:06:57] 2026-01-25 21:06:24,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | WARNING  | found no stored workdir sizes
[2026-01-25 13:06:57] 2026-01-25 21:06:24,329 | INFO     | will not add max space = 0 B to job metrics
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | WARNING  | wrong length of table data, x=[1769375042.0], y=[1140.0] (must be same and length>=4)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | could have reported an average CPU frequency of 2761 MHz (4 samples)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | ..............................
[2026-01-25 13:06:57] 2026-01-25 21:06:24,351 | INFO     | . Timing measurements:
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . get job = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . initial setup = 13 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . payload setup = 11 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . stage-in = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . payload execution = 32 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . stage-out = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | . log creation = 0 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | ..............................
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-25 13:06:57] 2026-01-25 21:06:24,352 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6983305017/pilotlog.txt
[2026-01-25 13:06:57] [end log extracts]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,398 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,399 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | 
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | job summary report
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | --------------------------------------------------
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | PanDA job id: 6983305017
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | task id: 48318042
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-25 13:04:16,993 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | pilot state: failed 
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | transexitcode: 65
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | exeerrorcode: 65
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | exitcode: 65
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,789 | INFO     | cpuconsumptiontime: 13 s
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | nevents: 0
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | neventsw: 0
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | pid: 877432
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | pgrp: 877432
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | corecount: 12
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | event service: False
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | sizes: {0: 2283809, 1: 2284270, 48: 2307446, 49: 2311738, 51: 2311766, 167: 2311932}
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | --------------------------------------------------
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | 
[2026-01-25 13:06:57] 2026-01-25 21:06:24,790 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | job 6983305017 has completed (purged errors)
[2026-01-25 13:06:57] 2026-01-25 21:06:24,854 | INFO     | overall cleanup function is called
[2026-01-25 13:06:57] 2026-01-25 21:06:25,861 | INFO     | --- collectZombieJob: --- 10, [877432]
[2026-01-25 13:06:57] 2026-01-25 21:06:25,861 | INFO     | zombie collector waiting for pid 877432
[2026-01-25 13:06:57] 2026-01-25 21:06:25,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 13:06:57] 2026-01-25 21:06:25,861 | INFO     | collected zombie processes
[2026-01-25 13:06:57] 2026-01-25 21:06:25,861 | INFO     | will attempt to kill all subprocesses of pid=877432
[2026-01-25 13:06:57] 2026-01-25 21:06:26,310 | INFO     | process IDs to be killed: [877432] (in reverse order)
[2026-01-25 13:06:57] 2026-01-25 21:06:26,383 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 13:06:57] 2026-01-25 21:06:26,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 13:06:57] 2026-01-25 21:06:26,416 | INFO     | did not find any defunct processes belonging to 877432
[2026-01-25 13:06:57] 2026-01-25 21:06:26,435 | INFO     | did not find any defunct processes belonging to 877432
[2026-01-25 13:06:57] 2026-01-25 21:06:26,435 | INFO     | ready for new job
[2026-01-25 13:06:57] 2026-01-25 21:06:26,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 13:06:57] 2026-01-25 21:06:26,437 | INFO     | **************************************
[2026-01-25 13:06:57] 2026-01-25 21:06:26,437 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 13:06:57] 2026-01-25 21:06:26,437 | INFO     | **************************************
[2026-01-25 13:06:57] 2026-01-25 21:06:26,437 | INFO     | 
[2026-01-25 13:06:57] 2026-01-25 21:06:26,439 | INFO     | architecture information:
[2026-01-25 13:06:57] 2026-01-25 21:06:26,439 | INFO     | executing command: cat /etc/os-release
[2026-01-25 13:06:57] 2026-01-25 21:06:26,453 | INFO     | cat /etc/os-release:
[2026-01-25 13:06:57] NAME="CentOS Linux"
[2026-01-25 13:06:57] VERSION="7 (Core)"
[2026-01-25 13:06:57] ID="centos"
[2026-01-25 13:06:57] ID_LIKE="rhel fedora"
[2026-01-25 13:06:57] VERSION_ID="7"
[2026-01-25 13:06:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 13:06:57] ANSI_COLOR="0;31"
[2026-01-25 13:06:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 13:06:57] HOME_URL="https://www.centos.org/"
[2026-01-25 13:06:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 13:06:57] 
[2026-01-25 13:06:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 13:06:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 13:06:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 13:06:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 13:06:57] 
[2026-01-25 13:06:57] 2026-01-25 21:06:26,453 | INFO     | **************************************
[2026-01-25 13:06:57] 2026-01-25 21:06:26,961 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-25 13:06:57] 2026-01-25 21:06:26,996 | INFO     | sufficient remaining disk space (1797604245504 B)
[2026-01-25 13:06:57] 2026-01-25 21:06:26,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 13:06:57] 2026-01-25 21:06:26,997 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 13:06:57] 2026-01-25 21:06:26,997 | INFO     | update_server=False
[2026-01-25 13:06:57] 2026-01-25 21:06:26,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 13:06:57] 2026-01-25 21:06:27,393 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-25 13:06:57] 2026-01-25 21:06:27,393 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-25 13:06:57] 2026-01-25 21:06:27,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 13:06:57] 2026-01-25 21:06:27,393 | INFO     | will abort loop
[2026-01-25 13:06:57] 2026-01-25 21:06:27,481 | INFO     | all payload control threads have been joined
[2026-01-25 13:06:57] 2026-01-25 21:06:27,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 13:06:57] 2026-01-25 21:06:27,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 13:06:57] 2026-01-25 21:06:27,948 | INFO     | all data control threads have been joined
[2026-01-25 13:06:57] 2026-01-25 21:06:28,003 | INFO     | [job] retrieve thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,015 | INFO     | all job control threads have been joined
[2026-01-25 13:06:57] 2026-01-25 21:06:28,097 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,180 | INFO     | [job] validate thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,184 | INFO     | [data] copytool_in thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,399 | INFO     | [job] job monitor thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,487 | INFO     | [payload] control thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,763 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,834 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,834 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:28,954 | INFO     | [data] control thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:29,021 | INFO     | [job] control thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:29,266 | INFO     | [payload] failed_post thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:29,430 | INFO     | [payload] validate_post thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:29,642 | INFO     | [data] copytool_out thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:29,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 13:06:57] 2026-01-25 21:06:30,809 | INFO     | [job] queue monitor thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:31,805 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 13:06:57] 2026-01-25 21:06:36,296 | INFO     | [monitor] cgroup control has ended
[2026-01-25 13:06:57] 2026-01-25 21:06:38,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830504417088)>', '<ExcThread(monitor, started 139829371205376)>']
[2026-01-25 13:06:57] 2026-01-25 21:06:43,054 | INFO     | all workflow threads have been joined
[2026-01-25 13:06:57] 2026-01-25 21:06:43,055 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 13:06:57] 2026-01-25 21:06:43,055 | INFO     | traces error code: 0
[2026-01-25 13:06:57] 2026-01-25 21:06:43,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 13:06:57] 2026-01-25 21:06:56,477 | INFO     | PID=872819 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-25 13:06:57] 2026-01-25 21:06:56,477 | INFO     | .. there are 35 such processes running
[2026-01-25 13:06:57] 2026-01-25 21:06:56,479 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 13:06:57] 2026-01-25 21:06:56,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 13:06:57] 2026-01-25 21:06:56,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 13:06:57] 2026-01-25 21:06:56,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 13:06:57] 2026-01-25 21:06:56,479 | CRITICAL | thread 'MainThread' is not alive
[2026-01-25 13:06:57] 2026-01-25 21:06:56,479 | INFO     | [monitor] control thread has ended
[2026-01-25 13:06:57] 2026-01-25 21:06:56,938 [wrapper] ==== pilot stdout END ====
[2026-01-25 13:06:57] 2026-01-25 21:06:56,984 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 13:06:57] 2026-01-25 21:06:57,045 [wrapper] pilotpid: 872819
[2026-01-25 13:06:57] 2026-01-25 21:06:57,072 [wrapper] Pilot exit status: 0
[2026-01-25 13:06:57] 2026-01-25 21:06:57,240 [wrapper] pandaids: 6983305017
[2026-01-25 13:06:57] 2026-01-25 21:06:57,296 [wrapper] cleanup supervisor_pilot  872825 872820
[2026-01-25 13:06:57] 2026-01-25 21:06:57,313 [wrapper] Test setup, not cleaning
[2026-01-25 13:06:57] 2026-01-25 21:06:57,334 [wrapper] apfmon messages muted
[2026-01-25 13:06:57] 2026-01-25 21:06:57,339 [wrapper] ==== wrapper stdout END ====
[2026-01-25 13:06:57] 2026-01-25 21:06:57,391 [wrapper] ==== wrapper stderr END ====
[2026-01-25 13:06:57]  *** Error codes and diagnostics ***
[2026-01-25 13:06:57]     "exeErrorCode": 65,
[2026-01-25 13:06:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-25 13:06:57]     "pilotErrorCode": 1305,
[2026-01-25 13:06:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-25 13:06:57]  *** Listing of results directory ***
[2026-01-25 13:06:57] total 491516
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc    584422 Jan 25 08:28 pilot3.tar.gz
[2026-01-25 13:06:57] -rwx------. 1 boinc boinc     36322 Jan 25 08:29 runpilot2-wrapper.sh
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc      5111 Jan 25 08:30 queuedata.json
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc       100 Jan 25 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 13:06:57] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 13:03 run_atlas
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc       105 Jan 25 13:03 job.xml
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc      6595 Jan 25 13:03 init_data.xml
[2026-01-25 13:06:57] -rw-r--r--. 2 boinc boinc 499171505 Jan 25 13:03 EVNT.48318040._000020.pool.root.1
[2026-01-25 13:06:57] -rw-r--r--. 2 boinc boinc     15845 Jan 25 13:03 start_atlas.sh
[2026-01-25 13:06:57] drwxrwx--x. 2 boinc boinc      4096 Jan 25 13:03 shared
[2026-01-25 13:06:57] -rw-r--r--. 2 boinc boinc    597767 Jan 25 13:03 input.tar.gz
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc         0 Jan 25 13:03 boinc_lockfile
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc      2530 Jan 25 13:03 pandaJob.out
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc   1004246 Jan 25 13:03 agis_schedconf.cvmfs.json
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc   1516246 Jan 25 13:03 agis_ddmendpoints.agis.ALL.json
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc       445 Jan 25 13:03 workernode_map.json
[2026-01-25 13:06:57] drwx------. 5 boinc boinc      4096 Jan 25 13:03 pilot3
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc       522 Jan 25 13:04 boinc_task_state.xml
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc       952 Jan 25 13:04 memory_monitor_summary.json
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc     20887 Jan 25 13:04 log.48318042._000976.job.log.tgz.1
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc      7016 Jan 25 13:06 heartbeat.json
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc        22 Jan 25 13:06 wrapper_checkpoint.txt
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc      8192 Jan 25 13:06 boinc_mmap_file
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc        95 Jan 25 13:06 pilot_heartbeat.json
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc       892 Jan 25 13:06 pilotlog.txt
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc     81566 Jan 25 13:06 log.48318042._000976.job.log.1
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc       188 Jan 25 13:06 output.list
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc       620 Jan 25 13:06 runtime_log
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc    122880 Jan 25 13:06 result.tar.gz
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc      8635 Jan 25 13:06 runtime_log.err
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc       643 Jan 25 13:06 NIGLDmrAI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmx7KDmlBfqJn.diag
[2026-01-25 13:06:57] -rw-r--r--. 1 boinc boinc     21643 Jan 25 13:06 stderr.txt
[2026-01-25 13:06:57] No HITS result produced
[2026-01-25 13:06:57]  *** Contents of shared directory: ***
[2026-01-25 13:06:57] total 488200
[2026-01-25 13:06:57] -rw-r--r--. 2 boinc boinc 499171505 Jan 25 13:03 ATLAS.root_0
[2026-01-25 13:06:57] -rw-r--r--. 2 boinc boinc     15845 Jan 25 13:03 start_atlas.sh
[2026-01-25 13:06:57] -rw-r--r--. 2 boinc boinc    597767 Jan 25 13:03 input.tar.gz
[2026-01-25 13:06:57] -rw-------. 1 boinc boinc    122880 Jan 25 13:06 result.tar.gz
13:06:59 (869169): run_atlas exited; CPU time 18.466280
13:06:59 (869169): called boinc_finish(0)

</stderr_txt>
]]>

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