Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:08:26 (2830308): wrapper (7.7.26015): starting
16:08:26 (2830308): wrapper: running run_atlas (--nthreads 9)
[2026-01-25 16:08:26] Arguments: --nthreads 9
[2026-01-25 16:08:26] Threads: 9
[2026-01-25 16:08:26] Checking for CVMFS
[2026-01-25 16:08:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 16:08:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 16:08:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 16:08:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 16:08:26] 2.13.3.0 4160 1718 85748 155520 3 295 30462093 39288832 7464 16776704 0 2239549 99.892 1624064 60917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 16:08:26] CVMFS is ok
[2026-01-25 16:08:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 16:08:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 16:08:26] Further information can be found at the LHC@home message board.
[2026-01-25 16:08:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 16:08:26] Checking for apptainer binary...
[2026-01-25 16:08:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 16:08:26] Running /usr/bin/apptainer --version
[2026-01-25 16:08:26] apptainer version 1.4.5-2.el9
[2026-01-25 16:08:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 16:08:27] c-211-29.aglt2.org
[2026-01-25 16:08:27] apptainer works
[2026-01-25 16:08:27] Set ATHENA_PROC_NUMBER=9
[2026-01-25 16:08:27] Set ATHENA_CORE_NUMBER=9
[2026-01-25 16:08:27] Starting ATLAS job with PandaID=6983062634
[2026-01-25 16:08:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:43:49]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:43:49] 2026-01-26 16:43:14,320 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983062634/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,321 | INFO     | extracted standard info from prmon json
[2026-01-26 11:43:49] 2026-01-26 16:43:14,321 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:43:49] 2026-01-26 16:43:14,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:43:49] 2026-01-26 16:43:14,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:43:49] 2026-01-26 16:43:14,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:43:49] 2026-01-26 16:43:14,526 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:43:49] 2026-01-26 16:43:14,528 | INFO     | sum of square deviations: 477780097032.3814
[2026-01-26 11:43:49] 2026-01-26 16:43:14,568 | INFO     | sum of deviations: 10178199120.809631
[2026-01-26 11:43:49] 2026-01-26 16:43:14,568 | INFO     | mean x: 1769410560.952381
[2026-01-26 11:43:49] 2026-01-26 16:43:14,569 | INFO     | mean y: 2570615.2692640694
[2026-01-26 11:43:49] 2026-01-26 16:43:14,569 | INFO     | intersect: -35123322.02050172
[2026-01-26 11:43:49] 2026-01-26 16:43:14,570 | INFO     | chi2: 2.2622179261364406
[2026-01-26 11:43:49] 2026-01-26 16:43:14,572 | INFO     | sum of square deviations: 471602372505.3256
[2026-01-26 11:43:49] 2026-01-26 16:43:14,694 | INFO     | sum of deviations: 86065920688.80443
[2026-01-26 11:43:49] 2026-01-26 16:43:14,695 | INFO     | mean x: 1769410408.4565217
[2026-01-26 11:43:49] 2026-01-26 16:43:14,695 | INFO     | mean y: 2572482.0460869567
[2026-01-26 11:43:49] 2026-01-26 16:43:14,695 | INFO     | intersect: -320339243.5060239
[2026-01-26 11:43:49] 2026-01-26 16:43:14,697 | INFO     | chi2: 1.5594811459196125
[2026-01-26 11:43:49] 2026-01-26 16:43:14,697 | INFO     | current chi2=1.5594811459196125 (change=31.064062047152397 %)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,698 | INFO     | sum of square deviations: 465477856384.90283
[2026-01-26 11:43:49] 2026-01-26 16:43:14,763 | INFO     | sum of deviations: 85908043612.64893
[2026-01-26 11:43:49] 2026-01-26 16:43:14,763 | INFO     | mean x: 1769410255.9572053
[2026-01-26 11:43:49] 2026-01-26 16:43:14,763 | INFO     | mean y: 2572478.1152838427
[2026-01-26 11:43:49] 2026-01-26 16:43:14,763 | INFO     | intersect: -323987789.6877583
[2026-01-26 11:43:49] 2026-01-26 16:43:14,765 | INFO     | chi2: 1.5595156188843486
[2026-01-26 11:43:49] 2026-01-26 16:43:14,765 | INFO     | current chi2=1.5595156188843486 (change=-0.002210540654905034 %)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,765 | INFO     | right removable region: 1144
[2026-01-26 11:43:49] 2026-01-26 16:43:14,767 | INFO     | sum of square deviations: 471601701505.3259
[2026-01-26 11:43:49] 2026-01-26 16:43:14,847 | INFO     | sum of deviations: -184446264040.2389
[2026-01-26 11:43:49] 2026-01-26 16:43:14,848 | INFO     | mean x: 1769410713.4565217
[2026-01-26 11:43:49] 2026-01-26 16:43:14,848 | INFO     | mean y: 2575410.665217391
[2026-01-26 11:43:49] 2026-01-26 16:43:14,848 | INFO     | intersect: 694602590.8219104
[2026-01-26 11:43:49] 2026-01-26 16:43:14,850 | INFO     | chi2: 0.7701601044242925
[2026-01-26 11:43:49] 2026-01-26 16:43:14,850 | INFO     | current chi2=0.7701601044242925 (change=65.95552994579877 %)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,851 | INFO     | sum of square deviations: 465476795353.2315
[2026-01-26 11:43:49] 2026-01-26 16:43:14,934 | INFO     | sum of deviations: -201243815168.9301
[2026-01-26 11:43:49] 2026-01-26 16:43:14,934 | INFO     | mean x: 1769410865.9606986
[2026-01-26 11:43:49] 2026-01-26 16:43:14,935 | INFO     | mean y: 2575827.9126637555
[2026-01-26 11:43:49] 2026-01-26 16:43:14,935 | INFO     | intersect: 767561315.5288067
[2026-01-26 11:43:49] 2026-01-26 16:43:14,936 | INFO     | chi2: 0.7541168015670778
[2026-01-26 11:43:49] 2026-01-26 16:43:14,937 | INFO     | current chi2=0.7541168015670778 (change=2.0831126885243303 %)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,937 | INFO     | left removable region: 20
[2026-01-26 11:43:49] 2026-01-26 16:43:14,938 | INFO     | sum of square deviations: 440332176262.2527
[2026-01-26 11:43:49] 2026-01-26 16:43:14,994 | INFO     | sum of deviations: -111073939135.86015
[2026-01-26 11:43:49] 2026-01-26 16:43:14,994 | INFO     | mean x: 1769410835.4741993
[2026-01-26 11:43:49] 2026-01-26 16:43:14,995 | INFO     | mean y: 2577418.8496441282
[2026-01-26 11:43:49] 2026-01-26 16:43:14,995 | INFO     | intersect: 448911895.50333357
[2026-01-26 11:43:49] 2026-01-26 16:43:14,996 | INFO     | chi2: 0.04655817540168881
[2026-01-26 11:43:49] 2026-01-26 16:43:14,997 | INFO     | current memory leak: -0.25 B/s (using 1124 data points, chi2=0.05)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,998 | INFO     | could have reported an average CPU frequency of 2899 MHz (42 samples)
[2026-01-26 11:43:49] 2026-01-26 16:43:14,998 | INFO     | ..............................
[2026-01-26 11:43:49] 2026-01-26 16:43:14,998 | INFO     | . Timing measurements:
[2026-01-26 11:43:49] 2026-01-26 16:43:14,998 | INFO     | . get job = 0 s
[2026-01-26 11:43:49] 2026-01-26 16:43:14,999 | INFO     | . initial setup = 10 s
[2026-01-26 11:43:49] 2026-01-26 16:43:14,999 | INFO     | . payload setup = 10 s
[2026-01-26 11:43:49] 2026-01-26 16:43:14,999 | INFO     | . stage-in = 0 s
[2026-01-26 11:43:49] 2026-01-26 16:43:14,999 | INFO     | . payload execution = 70432 s
[2026-01-26 11:43:49] 2026-01-26 16:43:15,033 | INFO     | . stage-out = 4 s
[2026-01-26 11:43:49] 2026-01-26 16:43:15,034 | INFO     | . log creation = 0 s
[2026-01-26 11:43:49] 2026-01-26 16:43:15,034 | INFO     | ..............................
[2026-01-26 11:43:49] 2026-01-26 16:43:15,391 | INFO     | 
[2026-01-26 11:43:49] 2026-01-26 16:43:15,391 | INFO     | job summary report
[2026-01-26 11:43:49] 2026-01-26 16:43:15,391 | INFO     | --------------------------------------------------
[2026-01-26 11:43:49] 2026-01-26 16:43:15,391 | INFO     | PanDA job id: 6983062634
[2026-01-26 11:43:49] 2026-01-26 16:43:15,391 | INFO     | task id: 48310724
[2026-01-26 11:43:49] 2026-01-26 16:43:15,392 | INFO     | errors: (none)
[2026-01-26 11:43:49] 2026-01-26 16:43:15,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:43:49] 2026-01-26 16:43:15,392 | INFO     | pilot state: finished 
[2026-01-26 11:43:49] 2026-01-26 16:43:15,392 | INFO     | transexitcode: 0
[2026-01-26 11:43:49] 2026-01-26 16:43:15,392 | INFO     | exeerrorcode: 0
[2026-01-26 11:43:49] 2026-01-26 16:43:15,392 | INFO     | exeerrordiag: 
[2026-01-26 11:43:49] 2026-01-26 16:43:15,393 | INFO     | exitcode: 0
[2026-01-26 11:43:49] 2026-01-26 16:43:15,393 | INFO     | exitmsg: OK
[2026-01-26 11:43:49] 2026-01-26 16:43:15,393 | INFO     | cpuconsumptiontime: 69794 s
[2026-01-26 11:43:49] 2026-01-26 16:43:15,393 | INFO     | nevents: 400
[2026-01-26 11:43:49] 2026-01-26 16:43:15,393 | INFO     | neventsw: 0
[2026-01-26 11:43:49] 2026-01-26 16:43:15,393 | INFO     | pid: 2841074
[2026-01-26 11:43:49] 2026-01-26 16:43:15,394 | INFO     | pgrp: 2841074
[2026-01-26 11:43:49] 2026-01-26 16:43:15,394 | INFO     | corecount: 9
[2026-01-26 11:43:49] 2026-01-26 16:43:15,394 | INFO     | event service: False
[2026-01-26 11:43:49] 2026-01-26 16:43:15,394 | INFO     | sizes: {0: 2283822, 1: 2283822, 2: 2284311, 70447: 2340235, 70451: 2349233, 70453: 2349289, 70455: 2349611}
[2026-01-26 11:43:49] 2026-01-26 16:43:15,394 | INFO     | --------------------------------------------------
[2026-01-26 11:43:49] 2026-01-26 16:43:15,394 | INFO     | 
[2026-01-26 11:43:49] 2026-01-26 16:43:15,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 11:43:49] 2026-01-26 16:43:15,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,559 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:43:49] 2026-01-26 16:43:15,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,559 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:43:49] 2026-01-26 16:43:15,560 | INFO     | job 6983062634 has completed (purged errors)
[2026-01-26 11:43:49] 2026-01-26 16:43:15,560 | INFO     | overall cleanup function is called
[2026-01-26 11:43:49] 2026-01-26 16:43:15,578 | INFO     | PID=2834996 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 11:43:49] 2026-01-26 16:43:15,579 | INFO     | .. there are 10 such processes running
[2026-01-26 11:43:49] 2026-01-26 16:43:16,574 | INFO     | --- collectZombieJob: --- 10, [2841074]
[2026-01-26 11:43:49] 2026-01-26 16:43:16,574 | INFO     | zombie collector waiting for pid 2841074
[2026-01-26 11:43:49] 2026-01-26 16:43:16,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:43:49] 2026-01-26 16:43:16,575 | INFO     | collected zombie processes
[2026-01-26 11:43:49] 2026-01-26 16:43:16,575 | INFO     | will attempt to kill all subprocesses of pid=2841074
[2026-01-26 11:43:49] 2026-01-26 16:43:17,352 | INFO     | process IDs to be killed: [2841074] (in reverse order)
[2026-01-26 11:43:49] 2026-01-26 16:43:17,443 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:43:49] 2026-01-26 16:43:17,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:43:49] 2026-01-26 16:43:17,455 | INFO     | did not find any defunct processes belonging to 2841074
[2026-01-26 11:43:49] 2026-01-26 16:43:17,468 | INFO     | did not find any defunct processes belonging to 2841074
[2026-01-26 11:43:49] 2026-01-26 16:43:17,468 | INFO     | ready for new job
[2026-01-26 11:43:49] 2026-01-26 16:43:17,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:43:49] 2026-01-26 16:43:17,473 | INFO     | **************************************
[2026-01-26 11:43:49] 2026-01-26 16:43:17,474 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:43:49] 2026-01-26 16:43:17,474 | INFO     | **************************************
[2026-01-26 11:43:49] 2026-01-26 16:43:17,474 | INFO     | 
[2026-01-26 11:43:49] 2026-01-26 16:43:17,476 | INFO     | architecture information:
[2026-01-26 11:43:49] 2026-01-26 16:43:17,477 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:43:49] 2026-01-26 16:43:17,495 | INFO     | cat /etc/os-release:
[2026-01-26 11:43:49] NAME="CentOS Linux"
[2026-01-26 11:43:49] VERSION="7 (Core)"
[2026-01-26 11:43:49] ID="centos"
[2026-01-26 11:43:49] ID_LIKE="rhel fedora"
[2026-01-26 11:43:49] VERSION_ID="7"
[2026-01-26 11:43:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:43:49] ANSI_COLOR="0;31"
[2026-01-26 11:43:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:43:49] HOME_URL="https://www.centos.org/"
[2026-01-26 11:43:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:43:49] 
[2026-01-26 11:43:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:43:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:43:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:43:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:43:49] 
[2026-01-26 11:43:49] 2026-01-26 16:43:17,495 | INFO     | **************************************
[2026-01-26 11:43:49] 2026-01-26 16:43:17,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 11:43:49] 2026-01-26 16:43:18,022 | INFO     | sufficient remaining disk space (48834281472 B)
[2026-01-26 11:43:49] 2026-01-26 16:43:18,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:43:49] 2026-01-26 16:43:18,023 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:43:49] 2026-01-26 16:43:18,023 | INFO     | update_server=False
[2026-01-26 11:43:49] 2026-01-26 16:43:18,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:43:49] 2026-01-26 16:43:18,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:43:49] 2026-01-26 16:43:18,087 | INFO     | all payload control threads have been joined
[2026-01-26 11:43:49] 2026-01-26 16:43:18,137 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 11:43:49] 2026-01-26 16:43:18,138 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 11:43:49] 2026-01-26 16:43:18,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:43:49] 2026-01-26 16:43:18,138 | INFO     | will abort loop
[2026-01-26 11:43:49] 2026-01-26 16:43:18,407 | INFO     | all job control threads have been joined
[2026-01-26 11:43:49] 2026-01-26 16:43:18,942 | INFO     | all data control threads have been joined
[2026-01-26 11:43:49] 2026-01-26 16:43:19,032 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,096 | INFO     | [payload] control thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,144 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,155 | INFO     | [job] validate thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,299 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,413 | INFO     | [job] control thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:43:49] 2026-01-26 16:43:19,587 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:19,948 | INFO     | [data] control thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:20,031 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:20,061 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:20,101 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:43:49] 2026-01-26 16:43:20,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:20,217 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:20,222 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:20,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:43:49] 2026-01-26 16:43:20,505 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:21,436 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:23,573 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:43:49] 2026-01-26 16:43:23,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021721388864)>', '<ExcThread(monitor, started 140021361272576)>']
[2026-01-26 11:43:49] 2026-01-26 16:43:28,678 | INFO     | all workflow threads have been joined
[2026-01-26 11:43:49] 2026-01-26 16:43:28,678 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:43:49] 2026-01-26 16:43:28,679 | INFO     | traces error code: 0
[2026-01-26 11:43:49] 2026-01-26 16:43:28,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:43:49] 2026-01-26 16:43:48,842 | INFO     | PID=2834996 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 11:43:49] 2026-01-26 16:43:48,843 | INFO     | .. there are 10 such processes running
[2026-01-26 11:43:49] 2026-01-26 16:43:48,844 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:43:49] 2026-01-26 16:43:48,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:43:49] 2026-01-26 16:43:48,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:43:49] 2026-01-26 16:43:48,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:43:49] 2026-01-26 16:43:48,847 | INFO     | [monitor] control thread has ended
[2026-01-26 11:43:49] 2026-01-26 16:43:49,189 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:43:49] 2026-01-26 16:43:49,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:43:49] 2026-01-26 16:43:49,195 [wrapper] pilotpid: 2834996
[2026-01-26 11:43:49] 2026-01-26 16:43:49,198 [wrapper] Pilot exit status: 0
[2026-01-26 11:43:49] 2026-01-26 16:43:49,213 [wrapper] pandaids: 6983062634
[2026-01-26 11:43:49] 2026-01-26 16:43:49,269 [wrapper] cleanup supervisor_pilot  275268 2834997
[2026-01-26 11:43:49] 2026-01-26 16:43:49,273 [wrapper] Test setup, not cleaning
[2026-01-26 11:43:49] 2026-01-26 16:43:49,276 [wrapper] apfmon messages muted
[2026-01-26 11:43:49] 2026-01-26 16:43:49,279 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:43:49] 2026-01-26 16:43:49,283 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:43:49]  *** Error codes and diagnostics ***
[2026-01-26 11:43:49]     "exeErrorCode": 0,
[2026-01-26 11:43:49]     "exeErrorDiag": "",
[2026-01-26 11:43:49]     "pilotErrorCode": 0,
[2026-01-26 11:43:49]     "pilotErrorDiag": "",
[2026-01-26 11:43:49]  *** Listing of results directory ***
[2026-01-26 11:43:49] total 678288
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:28 queuedata.json
[2026-01-26 11:43:49] -rwx------. 1 boincer umatlas     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas       100 Jan 25 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:43:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 25 16:08 run_atlas
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas       105 Jan 25 16:08 job.xml
[2026-01-26 11:43:49] -rw-r--r--. 2 boincer umatlas 492454090 Jan 25 16:08 EVNT.48310721._000207.pool.root.1
[2026-01-26 11:43:49] -rw-r--r--. 2 boincer umatlas     15845 Jan 25 16:08 start_atlas.sh
[2026-01-26 11:43:49] drwxrwx--x. 2 boincer umatlas      4096 Jan 25 16:08 shared
[2026-01-26 11:43:49] -rw-r--r--. 2 boincer umatlas    597765 Jan 25 16:08 input.tar.gz
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas         0 Jan 25 16:08 boinc_lockfile
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas      2535 Jan 25 16:08 pandaJob.out
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas        57 Jan 25 16:08 setup.sh.local
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas   1004246 Jan 25 16:08 agis_schedconf.cvmfs.json
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas       435 Jan 25 16:08 workernode_map.json
[2026-01-26 11:43:49] drwx------. 5 boincer umatlas      4096 Jan 25 16:08 pilot3
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas      6523 Jan 26 11:39 init_data.xml
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas       532 Jan 26 11:42 boinc_task_state.xml
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas 179582053 Jan 26 11:42 HITS.48310724._010322.pool.root.1
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas      1039 Jan 26 11:43 memory_monitor_summary.json
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas   1516246 Jan 26 11:43 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas   1128502 Jan 26 11:43 log.48310724._010322.job.log.tgz.1
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas      6377 Jan 26 11:43 heartbeat.json
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 11:43 boinc_mmap_file
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas        28 Jan 26 11:43 wrapper_checkpoint.txt
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas        95 Jan 26 11:43 pilot_heartbeat.json
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas       823 Jan 26 11:43 pilotlog.txt
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas   8164156 Jan 26 11:43 log.48310724._010322.job.log.1
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas       357 Jan 26 11:43 output.list
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas       620 Jan 26 11:43 runtime_log
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas   9308160 Jan 26 11:43 result.tar.gz
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas      9342 Jan 26 11:43 runtime_log.err
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas       658 Jan 26 11:43 FnNKDm59H48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmG1KDmuEiRvm.diag
[2026-01-26 11:43:49] -rw-r--r--. 1 boincer umatlas     21247 Jan 26 11:43 stderr.txt
[2026-01-26 11:43:49] HITS file was successfully produced:
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas 179582053 Jan 26 11:42 shared/HITS.pool.root.1
[2026-01-26 11:43:49]  *** Contents of shared directory: ***
[2026-01-26 11:43:49] total 665992
[2026-01-26 11:43:49] -rw-r--r--. 2 boincer umatlas 492454090 Jan 25 16:08 ATLAS.root_0
[2026-01-26 11:43:49] -rw-r--r--. 2 boincer umatlas     15845 Jan 25 16:08 start_atlas.sh
[2026-01-26 11:43:49] -rw-r--r--. 2 boincer umatlas    597765 Jan 25 16:08 input.tar.gz
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas 179582053 Jan 26 11:42 HITS.pool.root.1
[2026-01-26 11:43:49] -rw-------. 1 boincer umatlas   9308160 Jan 26 11:43 result.tar.gz
11:43:50 (2830308): run_atlas exited; CPU time 72371.011648
11:43:50 (2830308): called boinc_finish(0)

</stderr_txt>
]]>

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