Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:23 (782): wrapper (7.7.26015): starting
15:22:23 (782): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 15:22:23] Arguments: --nthreads 8
[2026-01-25 15:22:23] Threads: 8
[2026-01-25 15:22:23] Checking for CVMFS
[2026-01-25 15:22:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 15:22:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 15:22:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 15:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 15:22:23] 2.11.2.0 2860 152588 84884 155520 1 49 11051475 20275201 1 130560 0 38561291 99.818 10329592 30721 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 15:22:23] CVMFS is ok
[2026-01-25 15:22:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 15:22:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 15:22:23] Further information can be found at the LHC@home message board.
[2026-01-25 15:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 15:22:23] Checking for apptainer binary...
[2026-01-25 15:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 15:22:23] Running /usr/bin/apptainer --version
[2026-01-25 15:22:23] apptainer version 1.3.2-1.el7
[2026-01-25 15:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 15:22:24] c-204-9.aglt2.org
[2026-01-25 15:22:24] apptainer works
[2026-01-25 15:22:24] Set ATHENA_PROC_NUMBER=8
[2026-01-25 15:22:24] Set ATHENA_CORE_NUMBER=8
[2026-01-25 15:22:24] Starting ATLAS job with PandaID=6983062189
[2026-01-25 15:22:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 17:30:07]  *** The last 200 lines of the pilot log: ***
[2026-01-25 17:30:07] 2026-01-25 22:29:15,273 | INFO     | job 6983062189 has finished - writing final server update
[2026-01-25 17:30:07] 2026-01-25 22:29:15,274 | INFO     | total number of processed events: 400 (read)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,276 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983062189/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,277 | INFO     | extracted standard info from prmon json
[2026-01-25 17:30:07] 2026-01-25 22:29:15,277 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 17:30:07] 2026-01-25 22:29:15,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 17:30:07] 2026-01-25 22:29:15,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 17:30:07] 2026-01-25 22:29:15,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 17:30:07] 2026-01-25 22:29:15,281 | INFO     | fitting pss+swap vs Time
[2026-01-25 17:30:07] 2026-01-25 22:29:15,282 | INFO     | sum of square deviations: 591173875.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,282 | INFO     | sum of deviations: -5990759400.499998
[2026-01-25 17:30:07] 2026-01-25 22:29:15,283 | INFO     | monitor loop #573: job 0:6983062189 is in state 'finished'
[2026-01-25 17:30:07] 2026-01-25 22:29:15,283 | INFO     | mean x: 1769376345.5
[2026-01-25 17:30:07] 2026-01-25 22:29:15,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,284 | INFO     | mean y: 2561152.540322581
[2026-01-25 17:30:07] 2026-01-25 22:29:15,284 | INFO     | intersect: 17932832470.477802
[2026-01-25 17:30:07] 2026-01-25 22:29:15,284 | INFO     | chi2: 1.6536443499522535
[2026-01-25 17:30:07] 2026-01-25 22:29:15,284 | INFO     | sum of square deviations: 522502820.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,285 | INFO     | sum of deviations: -4818391403.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,285 | INFO     | mean x: 1769376193.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,285 | INFO     | mean y: 2563757.470588235
[2026-01-25 17:30:07] 2026-01-25 22:29:15,285 | INFO     | intersect: 16319312128.367552
[2026-01-25 17:30:07] 2026-01-25 22:29:15,286 | INFO     | chi2: 1.6555174340342425
[2026-01-25 17:30:07] 2026-01-25 22:29:15,286 | INFO     | current chi2=1.6555174340342425 (change=-0.11327006814028802 %)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,286 | INFO     | right removable region: 118
[2026-01-25 17:30:07] 2026-01-25 22:29:15,286 | INFO     | sum of square deviations: 522502820.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,287 | INFO     | sum of deviations: -25146218612.000004
[2026-01-25 17:30:07] 2026-01-25 22:29:15,287 | INFO     | mean x: 1769376498.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,287 | INFO     | mean y: 2602931.8655462186
[2026-01-25 17:30:07] 2026-01-25 22:29:15,287 | INFO     | intersect: 85156455739.0963
[2026-01-25 17:30:07] 2026-01-25 22:29:15,287 | INFO     | chi2: 0.14091143396445963
[2026-01-25 17:30:07] 2026-01-25 22:29:15,288 | INFO     | current chi2=0.14091143396445963 (change=91.47873398723684 %)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,288 | INFO     | sum of square deviations: 459366752.5
[2026-01-25 17:30:07] 2026-01-25 22:29:15,288 | INFO     | sum of deviations: -25688199830.000004
[2026-01-25 17:30:07] 2026-01-25 22:29:15,289 | INFO     | mean x: 1769376650.5
[2026-01-25 17:30:07] 2026-01-25 22:29:15,289 | INFO     | mean y: 2604109.50877193
[2026-01-25 17:30:07] 2026-01-25 22:29:15,289 | INFO     | intersect: 98947729600.67082
[2026-01-25 17:30:07] 2026-01-25 22:29:15,289 | INFO     | chi2: 0.09963214050588207
[2026-01-25 17:30:07] 2026-01-25 22:29:15,289 | INFO     | current chi2=0.09963214050588207 (change=29.29449534165477 %)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,289 | INFO     | sum of square deviations: 401533110.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,290 | INFO     | sum of deviations: -23041106904.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,290 | INFO     | mean x: 1769376803.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,290 | INFO     | mean y: 2597112.880733945
[2026-01-25 17:30:07] 2026-01-25 22:29:15,290 | INFO     | intersect: 101534448549.44283
[2026-01-25 17:30:07] 2026-01-25 22:29:15,291 | INFO     | chi2: 0.09876102562201468
[2026-01-25 17:30:07] 2026-01-25 22:29:15,291 | INFO     | current chi2=0.09876102562201468 (change=0.8743311941751964 %)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,291 | INFO     | left removable region: 30
[2026-01-25 17:30:07] 2026-01-25 22:29:15,291 | INFO     | sum of square deviations: 211285822.0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,292 | INFO     | sum of deviations: -12723372313.999998
[2026-01-25 17:30:07] 2026-01-25 22:29:15,292 | INFO     | mean x: 1769377077.5
[2026-01-25 17:30:07] 2026-01-25 22:29:15,292 | INFO     | mean y: 2572524.6818181816
[2026-01-25 17:30:07] 2026-01-25 22:29:15,292 | INFO     | intersect: 106552283753.7189
[2026-01-25 17:30:07] 2026-01-25 22:29:15,292 | INFO     | chi2: 0.08997568927420524
[2026-01-25 17:30:07] 2026-01-25 22:29:15,293 | INFO     | current memory leak: -60.22 B/s (using 88 data points, chi2=0.09)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,293 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,293 | INFO     | ..............................
[2026-01-25 17:30:07] 2026-01-25 22:29:15,293 | INFO     | . Timing measurements:
[2026-01-25 17:30:07] 2026-01-25 22:29:15,293 | INFO     | . get job = 0 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,293 | INFO     | . initial setup = 8 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,294 | INFO     | . payload setup = 8 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,294 | INFO     | . stage-in = 0 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,294 | INFO     | . payload execution = 7556 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,294 | INFO     | . stage-out = 0 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,294 | INFO     | . log creation = 0 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,294 | INFO     | ..............................
[2026-01-25 17:30:07] 2026-01-25 22:29:15,377 | INFO     | 
[2026-01-25 17:30:07] 2026-01-25 22:29:15,377 | INFO     | job summary report
[2026-01-25 17:30:07] 2026-01-25 22:29:15,377 | INFO     | --------------------------------------------------
[2026-01-25 17:30:07] 2026-01-25 22:29:15,378 | INFO     | PanDA job id: 6983062189
[2026-01-25 17:30:07] 2026-01-25 22:29:15,378 | INFO     | task id: 48310724
[2026-01-25 17:30:07] 2026-01-25 22:29:15,378 | INFO     | errors: (none)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,378 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 17:30:07] 2026-01-25 22:29:15,378 | INFO     | pilot state: finished 
[2026-01-25 17:30:07] 2026-01-25 22:29:15,378 | INFO     | transexitcode: 0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,379 | INFO     | exeerrorcode: 0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,379 | INFO     | exeerrordiag: 
[2026-01-25 17:30:07] 2026-01-25 22:29:15,379 | INFO     | exitcode: 0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,379 | INFO     | exitmsg: OK
[2026-01-25 17:30:07] 2026-01-25 22:29:15,379 | INFO     | cpuconsumptiontime: 54326 s
[2026-01-25 17:30:07] 2026-01-25 22:29:15,379 | INFO     | nevents: 400
[2026-01-25 17:30:07] 2026-01-25 22:29:15,380 | INFO     | neventsw: 0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,380 | INFO     | pid: 9046
[2026-01-25 17:30:07] 2026-01-25 22:29:15,380 | INFO     | pgrp: 9046
[2026-01-25 17:30:07] 2026-01-25 22:29:15,380 | INFO     | corecount: 8
[2026-01-25 17:30:07] 2026-01-25 22:29:15,380 | INFO     | event service: False
[2026-01-25 17:30:07] 2026-01-25 22:29:15,380 | INFO     | sizes: {0: 2283165, 1: 2284283, 12: 2284283, 7568: 2311799, 7569: 2320797, 7572: 2320853, 7575: 2321175}
[2026-01-25 17:30:07] 2026-01-25 22:29:15,381 | INFO     | --------------------------------------------------
[2026-01-25 17:30:07] 2026-01-25 22:29:15,381 | INFO     | 
[2026-01-25 17:30:07] 2026-01-25 22:29:15,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 17:30:07] 2026-01-25 22:29:15,410 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,410 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,410 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 17:30:07] 2026-01-25 22:29:15,413 | INFO     | job 6983062189 has completed (purged errors)
[2026-01-25 17:30:07] 2026-01-25 22:29:15,414 | INFO     | overall cleanup function is called
[2026-01-25 17:30:07] 2026-01-25 22:29:16,346 | INFO     | PID=4568 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 17:30:07] 2026-01-25 22:29:16,418 | INFO     | --- collectZombieJob: --- 10, [9046]
[2026-01-25 17:30:07] 2026-01-25 22:29:16,418 | INFO     | zombie collector waiting for pid 9046
[2026-01-25 17:30:07] 2026-01-25 22:29:16,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 17:30:07] 2026-01-25 22:29:16,419 | INFO     | collected zombie processes
[2026-01-25 17:30:07] 2026-01-25 22:29:16,419 | INFO     | will attempt to kill all subprocesses of pid=9046
[2026-01-25 17:30:07] 2026-01-25 22:29:16,507 | INFO     | process IDs to be killed: [9046] (in reverse order)
[2026-01-25 17:30:07] 2026-01-25 22:29:16,566 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 17:30:07] 2026-01-25 22:29:16,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 17:30:07] 2026-01-25 22:29:16,571 | INFO     | did not find any defunct processes belonging to 9046
[2026-01-25 17:30:07] 2026-01-25 22:29:16,574 | INFO     | did not find any defunct processes belonging to 9046
[2026-01-25 17:30:07] 2026-01-25 22:29:16,574 | INFO     | ready for new job
[2026-01-25 17:30:07] 2026-01-25 22:29:16,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 17:30:07] 2026-01-25 22:29:16,576 | INFO     | **************************************
[2026-01-25 17:30:07] 2026-01-25 22:29:16,577 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 17:30:07] 2026-01-25 22:29:16,577 | INFO     | **************************************
[2026-01-25 17:30:07] 2026-01-25 22:29:16,577 | INFO     | 
[2026-01-25 17:30:07] 2026-01-25 22:29:16,577 | INFO     | architecture information:
[2026-01-25 17:30:07] 2026-01-25 22:29:16,578 | INFO     | executing command: cat /etc/os-release
[2026-01-25 17:30:07] 2026-01-25 22:29:16,594 | INFO     | cat /etc/os-release:
[2026-01-25 17:30:07] NAME="CentOS Linux"
[2026-01-25 17:30:07] VERSION="7 (Core)"
[2026-01-25 17:30:07] ID="centos"
[2026-01-25 17:30:07] ID_LIKE="rhel fedora"
[2026-01-25 17:30:07] VERSION_ID="7"
[2026-01-25 17:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 17:30:07] ANSI_COLOR="0;31"
[2026-01-25 17:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 17:30:07] HOME_URL="https://www.centos.org/"
[2026-01-25 17:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 17:30:07] 
[2026-01-25 17:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 17:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 17:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 17:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 17:30:07] 
[2026-01-25 17:30:07] 2026-01-25 22:29:16,594 | INFO     | **************************************
[2026-01-25 17:30:07] 2026-01-25 22:29:17,097 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 17:30:07] 2026-01-25 22:29:17,117 | INFO     | sufficient remaining disk space (18040750080 B)
[2026-01-25 17:30:07] 2026-01-25 22:29:17,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 17:30:07] 2026-01-25 22:29:17,118 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 17:30:07] 2026-01-25 22:29:17,118 | INFO     | update_server=False
[2026-01-25 17:30:07] 2026-01-25 22:29:17,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 17:30:07] 2026-01-25 22:29:17,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 17:30:07] 2026-01-25 22:29:17,119 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-25 17:30:07] 2026-01-25 22:29:17,120 | INFO     | aborting loop
[2026-01-25 17:30:07] 2026-01-25 22:29:17,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 17:30:07] 2026-01-25 22:29:17,120 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 17:30:07] 2026-01-25 22:29:17,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 17:30:07] 2026-01-25 22:29:17,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 17:30:07] 2026-01-25 22:29:17,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 17:30:07] 2026-01-25 22:29:17,633 | INFO     | all data control threads have been joined
[2026-01-25 17:30:07] 2026-01-25 22:29:18,122 | INFO     | [job] retrieve thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,126 | INFO     | [job] job monitor thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,127 | INFO     | [job] queue monitor thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,198 | INFO     | [data] copytool_in thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,217 | INFO     | [payload] failed_post thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,256 | INFO     | all job control threads have been joined
[2026-01-25 17:30:07] 2026-01-25 22:29:18,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 17:30:07] 2026-01-25 22:29:18,380 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,539 | INFO     | all payload control threads have been joined
[2026-01-25 17:30:07] 2026-01-25 22:29:18,638 | INFO     | [data] control thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,743 | INFO     | [payload] validate_post thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:18,931 | INFO     | [job] validate thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:19,127 | INFO     | [data] copytool_out thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:19,261 | INFO     | [job] control thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:19,298 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:19,301 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:19,544 | INFO     | [payload] control thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:19,593 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:22,343 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 17:30:07] 2026-01-25 22:29:59,868 | INFO     | [monitor] cgroup control has ended
[2026-01-25 17:30:07] 2026-01-25 22:30:01,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011490899776)>', '<ExcThread(monitor, started 140010724501248)>']
[2026-01-25 17:30:07] 2026-01-25 22:30:02,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 17:30:07] 2026-01-25 22:30:02,352 | INFO     | [monitor] control thread has ended
[2026-01-25 17:30:07] 2026-01-25 22:30:06,970 | INFO     | all workflow threads have been joined
[2026-01-25 17:30:07] 2026-01-25 22:30:06,970 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 17:30:07] 2026-01-25 22:30:06,971 | INFO     | traces error code: 0
[2026-01-25 17:30:07] 2026-01-25 22:30:06,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 17:30:07] 2026-01-25 22:30:07,097 [wrapper] ==== pilot stdout END ====
[2026-01-25 17:30:07] 2026-01-25 22:30:07,101 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 17:30:07] 2026-01-25 22:30:07,106 [wrapper] pilotpid: 4568
[2026-01-25 17:30:07] 2026-01-25 22:30:07,110 [wrapper] Pilot exit status: 0
[2026-01-25 17:30:07] 2026-01-25 22:30:07,130 [wrapper] pandaids: 6983062189
[2026-01-25 17:30:07] 2026-01-25 22:30:07,183 [wrapper] cleanup supervisor_pilot 22066 4569
[2026-01-25 17:30:07] 2026-01-25 22:30:07,189 [wrapper] Test setup, not cleaning
[2026-01-25 17:30:07] 2026-01-25 22:30:07,194 [wrapper] apfmon messages muted
[2026-01-25 17:30:07] 2026-01-25 22:30:07,199 [wrapper] ==== wrapper stdout END ====
[2026-01-25 17:30:07] 2026-01-25 22:30:07,203 [wrapper] ==== wrapper stderr END ====
[2026-01-25 17:30:07]  *** Error codes and diagnostics ***
[2026-01-25 17:30:07]     "exeErrorCode": 0,
[2026-01-25 17:30:07]     "exeErrorDiag": "",
[2026-01-25 17:30:07]     "pilotErrorCode": 0,
[2026-01-25 17:30:07]     "pilotErrorDiag": "",
[2026-01-25 17:30:07]  *** Listing of results directory ***
[2026-01-25 17:30:07] total 660728
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-25 17:30:07] -rwx------ 1 boincer umatlas     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 11:28 queuedata.json
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas       100 Jan 25 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 17:30:07] -rwxr-xr-x 1 boincer umatlas      7986 Jan 25 15:22 run_atlas
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas       105 Jan 25 15:22 job.xml
[2026-01-25 17:30:07] -rw-r--r-- 2 boincer umatlas 490622643 Jan 25 15:22 EVNT.48310721._000203.pool.root.1
[2026-01-25 17:30:07] -rw-r--r-- 2 boincer umatlas    597765 Jan 25 15:22 input.tar.gz
[2026-01-25 17:30:07] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 15:22 start_atlas.sh
[2026-01-25 17:30:07] drwxrwx--x 2 boincer umatlas      4096 Jan 25 15:22 shared
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas         0 Jan 25 15:22 boinc_lockfile
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas      2535 Jan 25 15:22 pandaJob.out
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas        57 Jan 25 15:22 setup.sh.local
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas   1004246 Jan 25 15:22 agis_schedconf.cvmfs.json
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas   1516246 Jan 25 15:22 agis_ddmendpoints.agis.ALL.json
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas       431 Jan 25 15:22 workernode_map.json
[2026-01-25 17:30:07] drwx------ 5 boincer umatlas      4096 Jan 25 15:22 pilot3
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas      5909 Jan 25 17:27 init_data.xml
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas        95 Jan 25 17:28 pilot_heartbeat.json
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas 179148777 Jan 25 17:28 HITS.48310724._010113.pool.root.1
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas       530 Jan 25 17:29 boinc_task_state.xml
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas      1048 Jan 25 17:29 memory_monitor_summary.json
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas    361833 Jan 25 17:29 log.48310724._010113.job.log.tgz.1
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas      6403 Jan 25 17:29 heartbeat.json
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas      8192 Jan 25 17:29 boinc_mmap_file
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas        27 Jan 25 17:29 wrapper_checkpoint.txt
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas      4548 Jan 25 17:30 pilotlog.txt
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas   1073404 Jan 25 17:30 log.48310724._010113.job.log.1
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas       357 Jan 25 17:30 output.list
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas       620 Jan 25 17:30 runtime_log
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas   1454080 Jan 25 17:30 result.tar.gz
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas      9336 Jan 25 17:30 runtime_log.err
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas       657 Jan 25 17:30 NyOMDmu9H48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9F1KDmaXjIIm.diag
[2026-01-25 17:30:07] -rw-r--r-- 1 boincer umatlas     21090 Jan 25 17:30 stderr.txt
[2026-01-25 17:30:07] HITS file was successfully produced:
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas 179148777 Jan 25 17:28 shared/HITS.pool.root.1
[2026-01-25 17:30:07]  *** Contents of shared directory: ***
[2026-01-25 17:30:07] total 656100
[2026-01-25 17:30:07] -rw-r--r-- 2 boincer umatlas 490622643 Jan 25 15:22 ATLAS.root_0
[2026-01-25 17:30:07] -rw-r--r-- 2 boincer umatlas    597765 Jan 25 15:22 input.tar.gz
[2026-01-25 17:30:07] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 15:22 start_atlas.sh
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas 179148777 Jan 25 17:28 HITS.pool.root.1
[2026-01-25 17:30:07] -rw------- 1 boincer umatlas   1454080 Jan 25 17:30 result.tar.gz
17:30:08 (782): run_atlas exited; CPU time 54274.165554
17:30:08 (782): called boinc_finish(0)

</stderr_txt>
]]>

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