Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:45:30 (2479202): wrapper (7.7.26015): starting
12:45:30 (2479202): wrapper: running run_atlas (--nthreads 12)
[2026-01-25 12:45:30] Arguments: --nthreads 12
[2026-01-25 12:45:30] Threads: 12
[2026-01-25 12:45:30] Checking for CVMFS
[2026-01-25 12:45:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 12:45:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 12:45:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 12:45:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 12:45:33] 2.11.5.0 3857663 80104 233692 155520 2 449 39603055 45568000 21059 130560 0 351282381 99.770 239867081 18929 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-25 12:45:33] CVMFS is ok
[2026-01-25 12:45:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 12:45:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 12:45:34] Further information can be found at the LHC@home message board.
[2026-01-25 12:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 12:45:34] Checking for apptainer binary...
[2026-01-25 12:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 12:45:34] Running /usr/bin/apptainer --version
[2026-01-25 12:45:34] apptainer version 1.4.1-1.el9
[2026-01-25 12:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 12:45:36] wns0075.triumf.lcg
[2026-01-25 12:45:36] apptainer works
[2026-01-25 12:45:36] Set ATHENA_PROC_NUMBER=12
[2026-01-25 12:45:36] Set ATHENA_CORE_NUMBER=12
[2026-01-25 12:45:36] Starting ATLAS job with PandaID=6983061966
[2026-01-25 12:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 12:52:02]  *** The last 200 lines of the pilot log: ***
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | wrong length of table data, x=[1769374084.0], y=[2011.0] (must be same and length>=4)
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | could have reported an average CPU frequency of 1349 MHz (4 samples)
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | ..............................
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . Timing measurements:
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . get job = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . initial setup = 31 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . payload setup = 28 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . stage-in = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . payload execution = 75 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | . stage-out = 1 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | . log creation = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | ..............................
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6983061966/pilotlog.txt
[2026-01-25 12:52:02] 2026-01-25 20:50:55,020 | INFO     | PID=2484229 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 12:52:02] 2026-01-25 20:50:55,021 | INFO     | .. there are 28 such processes running
[2026-01-25 12:52:02] 2026-01-25 20:50:55,035 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-25 12:52:02] - Log from pilotlog.txt -
[2026-01-25 12:52:02] 2026-01-25 20:50:54,942 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 12:52:02] 2026-01-25 20:50:54,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | wrong length of table data, x=[1769374084.0], y=[2011.0] (must be same and length>=4)
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | could have reported an average CPU frequency of 1349 MHz (4 samples)
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | ..............................
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . Timing measurements:
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . get job = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . initial setup = 31 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . payload setup = 28 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . stage-in = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . payload execution = 75 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | . stage-out = 1 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | . log creation = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | ..............................
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6983061966/pilotlog.txt
[2026-01-25 12:52:02] 2026-01-25 20:50:55,020 | INFO     | PID=2484229 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 12:52:02] 2026-01-25 20:50:55,021 | INFO     | .. there are 28 such processes running
[2026-01-25 12:52:02] 2026-01-25 20:50:55,035 | WARNING  | 
[2026-01-25 12:52:02] [begin log extracts]
[2026-01-25 12:52:02] - Log from pilotlog.txt -
[2026-01-25 12:52:02] 2026-01-25 20:50:54,942 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 12:52:02] 2026-01-25 20:50:54,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 12:52:02] 2026-01-25 20:50:54,976 | WARNING  | wrong length of table data, x=[1769374084.0], y=[2011.0] (must be same and length>=4)
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | could have reported an average CPU frequency of 1349 MHz (4 samples)
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | ..............................
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . Timing measurements:
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . get job = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . initial setup = 31 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . payload setup = 28 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . stage-in = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,977 | INFO     | . payload execution = 75 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | . stage-out = 1 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | . log creation = 0 s
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | ..............................
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-25 12:52:02] 2026-01-25 20:50:54,978 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6983061966/pilotlog.txt
[2026-01-25 12:52:02] 2026-01-25 20:50:55,020 | INFO     | PID=2484229 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 12:52:02] 2026-01-25 20:50:55,021 | INFO     | .. there are 28 such processes running
[2026-01-25 12:52:02] [end log extracts]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,036 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-25 12:52:02] 2026-01-25 20:50:55,037 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-25 12:52:02] 2026-01-25 20:50:55,332 | INFO     | 
[2026-01-25 12:52:02] 2026-01-25 20:50:55,332 | INFO     | job summary report
[2026-01-25 12:52:02] 2026-01-25 20:50:55,332 | INFO     | --------------------------------------------------
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | PanDA job id: 6983061966
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | task id: 48310724
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-25 12:48:46,860 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | pilot state: failed 
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | transexitcode: 65
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | exeerrorcode: 65
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | exitcode: 65
[2026-01-25 12:52:02] 2026-01-25 20:50:55,333 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | cpuconsumptiontime: 26 s
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | nevents: 0
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | neventsw: 0
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | pid: 2495734
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | pgrp: 2495734
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | corecount: 12
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | event service: False
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | sizes: {0: 2283761, 1: 2283845, 2: 2283845, 3: 2284306, 14: 2284306, 107: 2307591, 108: 2307695, 109: 2312015, 110: 2312071, 226: 2312237}
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | --------------------------------------------------
[2026-01-25 12:52:02] 2026-01-25 20:50:55,334 | INFO     | 
[2026-01-25 12:52:02] 2026-01-25 20:50:55,335 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-25 12:52:02] 2026-01-25 20:50:55,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,440 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,442 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 12:52:02] 2026-01-25 20:50:55,443 | INFO     | job 6983061966 has completed (purged errors)
[2026-01-25 12:52:02] 2026-01-25 20:50:55,460 | INFO     | overall cleanup function is called
[2026-01-25 12:52:02] 2026-01-25 20:50:56,469 | INFO     | --- collectZombieJob: --- 10, [2495734]
[2026-01-25 12:52:02] 2026-01-25 20:50:56,469 | INFO     | zombie collector waiting for pid 2495734
[2026-01-25 12:52:02] 2026-01-25 20:50:56,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 12:52:02] 2026-01-25 20:50:56,470 | INFO     | collected zombie processes
[2026-01-25 12:52:02] 2026-01-25 20:50:56,470 | INFO     | will attempt to kill all subprocesses of pid=2495734
[2026-01-25 12:52:02] 2026-01-25 20:50:57,920 | INFO     | process IDs to be killed: [2495734] (in reverse order)
[2026-01-25 12:52:02] 2026-01-25 20:50:58,290 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 12:52:02] 2026-01-25 20:50:58,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 12:52:02] 2026-01-25 20:50:58,309 | INFO     | did not find any defunct processes belonging to 2495734
[2026-01-25 12:52:02] 2026-01-25 20:50:58,324 | INFO     | did not find any defunct processes belonging to 2495734
[2026-01-25 12:52:02] 2026-01-25 20:50:58,324 | INFO     | ready for new job
[2026-01-25 12:52:02] 2026-01-25 20:50:58,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 12:52:02] 2026-01-25 20:50:58,338 | INFO     | **************************************
[2026-01-25 12:52:02] 2026-01-25 20:50:58,339 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 12:52:02] 2026-01-25 20:50:58,339 | INFO     | **************************************
[2026-01-25 12:52:02] 2026-01-25 20:50:58,339 | INFO     | 
[2026-01-25 12:52:02] 2026-01-25 20:50:58,355 | INFO     | architecture information:
[2026-01-25 12:52:02] 2026-01-25 20:50:58,360 | INFO     | executing command: cat /etc/os-release
[2026-01-25 12:52:02] 2026-01-25 20:50:58,417 | INFO     | cat /etc/os-release:
[2026-01-25 12:52:02] NAME="CentOS Linux"
[2026-01-25 12:52:02] VERSION="7 (Core)"
[2026-01-25 12:52:02] ID="centos"
[2026-01-25 12:52:02] ID_LIKE="rhel fedora"
[2026-01-25 12:52:02] VERSION_ID="7"
[2026-01-25 12:52:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 12:52:02] ANSI_COLOR="0;31"
[2026-01-25 12:52:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 12:52:02] HOME_URL="https://www.centos.org/"
[2026-01-25 12:52:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 12:52:02] 
[2026-01-25 12:52:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 12:52:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 12:52:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 12:52:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 12:52:02] 
[2026-01-25 12:52:02] 2026-01-25 20:50:58,418 | INFO     | **************************************
[2026-01-25 12:52:02] 2026-01-25 20:50:58,922 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-25 12:52:02] 2026-01-25 20:50:59,070 | INFO     | sufficient remaining disk space (1908262567936 B)
[2026-01-25 12:52:02] 2026-01-25 20:50:59,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 12:52:02] 2026-01-25 20:50:59,070 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 12:52:02] 2026-01-25 20:50:59,071 | INFO     | update_server=False
[2026-01-25 12:52:02] 2026-01-25 20:50:59,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 12:52:02] 2026-01-25 20:50:59,171 | INFO     | all job control threads have been joined
[2026-01-25 12:52:02] 2026-01-25 20:50:59,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 12:52:02] 2026-01-25 20:50:59,330 | INFO     | all data control threads have been joined
[2026-01-25 12:52:02] 2026-01-25 20:50:59,885 | INFO     | all payload control threads have been joined
[2026-01-25 12:52:02] 2026-01-25 20:50:59,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 12:52:02] 2026-01-25 20:50:59,977 | INFO     | aborting loop
[2026-01-25 12:52:02] 2026-01-25 20:51:00,076 | INFO     | [job] retrieve thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,079 | INFO     | [payload] validate_post thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 12:52:02] 2026-01-25 20:51:00,185 | INFO     | [job] control thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,336 | INFO     | [data] control thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,546 | INFO     | [payload] failed_post thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,769 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,777 | INFO     | [data] copytool_in thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,797 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,891 | INFO     | [payload] control thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:00,983 | INFO     | [job] job monitor thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:01,127 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:01,171 | INFO     | [job] queue monitor thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:01,217 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:01,218 | INFO     | [data] copytool_out thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:01,218 | INFO     | [job] validate thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:02,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 12:52:02] 2026-01-25 20:51:06,498 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 12:52:02] 2026-01-25 20:51:28,015 | INFO     | PID=2484229 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 12:52:02] 2026-01-25 20:51:28,016 | INFO     | .. there are 28 such processes running
[2026-01-25 12:52:02] 2026-01-25 20:51:28,017 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 12:52:02] 2026-01-25 20:51:28,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 12:52:02] 2026-01-25 20:51:28,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 12:52:02] 2026-01-25 20:51:53,916 | INFO     | [monitor] cgroup control has ended
[2026-01-25 12:52:02] 2026-01-25 20:51:54,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509920171840)>', '<ExcThread(monitor, started 140509234321152)>']
[2026-01-25 12:52:02] 2026-01-25 20:51:55,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 12:52:02] 2026-01-25 20:51:55,186 | INFO     | [monitor] control thread has ended
[2026-01-25 12:52:02] 2026-01-25 20:51:59,752 | INFO     | all workflow threads have been joined
[2026-01-25 12:52:02] 2026-01-25 20:51:59,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 12:52:02] 2026-01-25 20:51:59,753 | INFO     | traces error code: 0
[2026-01-25 12:52:02] 2026-01-25 20:51:59,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 12:52:02] 2026-01-25 20:52:00,980 [wrapper] ==== pilot stdout END ====
[2026-01-25 12:52:02] 2026-01-25 20:52:01,019 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 12:52:02] 2026-01-25 20:52:01,051 [wrapper] pilotpid: 2484229
[2026-01-25 12:52:02] 2026-01-25 20:52:01,095 [wrapper] Pilot exit status: 0
[2026-01-25 12:52:02] 2026-01-25 20:52:01,240 [wrapper] pandaids: 6983061966
[2026-01-25 12:52:02] 2026-01-25 20:52:02,031 [wrapper] cleanup supervisor_pilot 2484239 2484230
[2026-01-25 12:52:02] 2026-01-25 20:52:02,066 [wrapper] Test setup, not cleaning
[2026-01-25 12:52:02] 2026-01-25 20:52:02,093 [wrapper] apfmon messages muted
[2026-01-25 12:52:02] 2026-01-25 20:52:02,112 [wrapper] ==== wrapper stdout END ====
[2026-01-25 12:52:02] 2026-01-25 20:52:02,164 [wrapper] ==== wrapper stderr END ====
[2026-01-25 12:52:02]  *** Error codes and diagnostics ***
[2026-01-25 12:52:02]     "exeErrorCode": 65,
[2026-01-25 12:52:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-25 12:52:02]     "pilotErrorCode": 1305,
[2026-01-25 12:52:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-25 12:52:02]  *** Listing of results directory ***
[2026-01-25 12:52:02] total 489148
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc    584422 Jan 25 08:28 pilot3.tar.gz
[2026-01-25 12:52:02] -rwx------. 1 boinc boinc     36322 Jan 25 08:28 runpilot2-wrapper.sh
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc      5111 Jan 25 08:28 queuedata.json
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc       100 Jan 25 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 12:52:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 12:45 run_atlas
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc       105 Jan 25 12:45 job.xml
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc      6594 Jan 25 12:45 init_data.xml
[2026-01-25 12:52:02] -rw-r--r--. 2 boinc boinc 496723875 Jan 25 12:45 EVNT.48310721._000199.pool.root.1
[2026-01-25 12:52:02] -rw-r--r--. 2 boinc boinc     15845 Jan 25 12:45 start_atlas.sh
[2026-01-25 12:52:02] drwxrwx--x. 2 boinc boinc      4096 Jan 25 12:45 shared
[2026-01-25 12:52:02] -rw-r--r--. 2 boinc boinc    597760 Jan 25 12:45 input.tar.gz
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc         0 Jan 25 12:45 boinc_lockfile
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc      2534 Jan 25 12:45 pandaJob.out
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc   1004246 Jan 25 12:46 agis_schedconf.cvmfs.json
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc   1516246 Jan 25 12:46 agis_ddmendpoints.agis.ALL.json
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc       445 Jan 25 12:46 workernode_map.json
[2026-01-25 12:52:02] drwx------. 5 boinc boinc      4096 Jan 25 12:46 pilot3
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc       524 Jan 25 12:48 boinc_task_state.xml
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc       954 Jan 25 12:48 memory_monitor_summary.json
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc     22170 Jan 25 12:48 log.48310724._009938.job.log.tgz.1
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc      7063 Jan 25 12:50 heartbeat.json
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc        95 Jan 25 12:51 pilot_heartbeat.json
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc      4819 Jan 25 12:51 pilotlog.txt
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc        23 Jan 25 12:52 wrapper_checkpoint.txt
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc      8192 Jan 25 12:52 boinc_mmap_file
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc     89021 Jan 25 12:52 log.48310724._009938.job.log.1
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc       188 Jan 25 12:52 output.list
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc       620 Jan 25 12:52 runtime_log
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc    133120 Jan 25 12:52 result.tar.gz
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc      8635 Jan 25 12:52 runtime_log.err
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc       643 Jan 25 12:52 b8NODmk9H48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrr7KDmOt0gVn.diag
[2026-01-25 12:52:02] -rw-r--r--. 1 boinc boinc     22067 Jan 25 12:52 stderr.txt
[2026-01-25 12:52:02] No HITS result produced
[2026-01-25 12:52:02]  *** Contents of shared directory: ***
[2026-01-25 12:52:02] total 485820
[2026-01-25 12:52:02] -rw-r--r--. 2 boinc boinc 496723875 Jan 25 12:45 ATLAS.root_0
[2026-01-25 12:52:02] -rw-r--r--. 2 boinc boinc     15845 Jan 25 12:45 start_atlas.sh
[2026-01-25 12:52:02] -rw-r--r--. 2 boinc boinc    597760 Jan 25 12:45 input.tar.gz
[2026-01-25 12:52:02] -rw-------. 1 boinc boinc    133120 Jan 25 12:52 result.tar.gz
12:52:04 (2479202): run_atlas exited; CPU time 35.400844
12:52:04 (2479202): called boinc_finish(0)

</stderr_txt>
]]>

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