Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:23 (2138577): wrapper (7.7.26015): starting
01:52:23 (2138577): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 01:52:23] Arguments: --nthreads 2
[2026-01-26 01:52:23] Threads: 2
[2026-01-26 01:52:23] Checking for CVMFS
[2026-01-26 01:52:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 01:52:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 01:52:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 01:52:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 01:52:24] 2.9.2.0 1326838 7457 61148 155526 1 50 25206979 36864000 0 130560 0 2422032 99.982 229543 3727 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 01:52:24] CVMFS is ok
[2026-01-26 01:52:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 01:52:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 01:52:24] Further information can be found at the LHC@home message board.
[2026-01-26 01:52:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 01:52:24] Checking for apptainer binary...
[2026-01-26 01:52:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 01:52:24] Running /usr/bin/apptainer --version
[2026-01-26 01:52:24] apptainer version 1.4.1-1.1
[2026-01-26 01:52:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 01:52:24] thA334a
[2026-01-26 01:52:24] apptainer works
[2026-01-26 01:52:24] Set ATHENA_PROC_NUMBER=2
[2026-01-26 01:52:24] Set ATHENA_CORE_NUMBER=2
[2026-01-26 01:52:24] Starting ATLAS job with PandaID=6982689729
[2026-01-26 01:52:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 03:47:16]  *** The last 200 lines of the pilot log: ***
[2026-01-26 03:47:16] 2026-01-26 02:46:46,028 | INFO     | all job control threads have been joined
[2026-01-26 03:47:16] 2026-01-26 02:46:46,571 | INFO     | all data control threads have been joined
[2026-01-26 03:47:16] 2026-01-26 02:46:46,904 | INFO     | all payload control threads have been joined
[2026-01-26 03:47:16] 2026-01-26 02:46:46,996 | INFO     | [job] retrieve thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:46,997 | INFO     | [job] queue monitor thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,033 | INFO     | [job] control thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,476 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,550 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,577 | INFO     | [data] control thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,579 | INFO     | [job] validate thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,655 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,717 | INFO     | [data] copytool_in thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,804 | INFO     | [payload] validate_post thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,909 | INFO     | [payload] control thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:47,915 | WARNING  | process 2147011 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 03:47:16] 2026-01-26 02:46:47,936 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 03:47:16] 2026-01-26 02:46:47,936 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 03:47:16] 2026-01-26 02:46:47,936 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 03:47:16] 2026-01-26 02:46:47,936 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 03:47:16] 2026-01-26 02:46:47,936 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6982689729/payload.stdout) since it has not been created yet
[2026-01-26 03:47:16] 2026-01-26 02:46:47,937 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 03:47:16] 2026-01-26 02:46:47,945 | INFO     | sufficient remaining disk space (497690869760 B)
[2026-01-26 03:47:16] 2026-01-26 02:46:47,945 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 03:47:16] 2026-01-26 02:46:47,946 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6982689729/HITS.48310826._009620.pool.root.1 since it does not exist
[2026-01-26 03:47:16] 2026-01-26 02:46:47,972 | INFO     | number of running child processes to parent process 2147011: 1
[2026-01-26 03:47:16] 2026-01-26 02:46:47,972 | INFO     | maximum number of monitored processes: 6
[2026-01-26 03:47:16] 2026-01-26 02:46:47,972 | INFO     | aborting job monitoring since job object (job id=6982689729) has expired
[2026-01-26 03:47:16] 2026-01-26 02:46:47,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 03:47:16] 2026-01-26 02:46:47,972 | INFO     | will abort loop
[2026-01-26 03:47:16] 2026-01-26 02:46:47,996 | INFO     | [data] copytool_out thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:48,508 | INFO     | [payload] failed_post thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:48,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 03:47:16] 2026-01-26 02:46:48,977 | INFO     | [job] job monitor thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:50,511 | INFO     | [monitor] cgroup control has ended
[2026-01-26 03:47:16] 2026-01-26 02:46:52,909 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 03:47:16] 2026-01-26 02:46:54,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357061736256)>', '<ExcThread(monitor, started 140356410652416)>']
[2026-01-26 03:47:16] 2026-01-26 02:46:59,285 | INFO     | all workflow threads have been joined
[2026-01-26 03:47:16] 2026-01-26 02:46:59,286 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 03:47:16] 2026-01-26 02:46:59,286 | INFO     | traces error code: 0
[2026-01-26 03:47:16] 2026-01-26 02:46:59,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 03:47:16] 2026-01-26 02:47:16,862 | INFO     | PID=2142605 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 03:47:16] 2026-01-26 02:47:16,862 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 03:47:16] 2026-01-26 02:47:16,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 03:47:16] 2026-01-26 02:47:16,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 03:47:16] 2026-01-26 02:47:16,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 03:47:16] 2026-01-26 02:47:16,862 | INFO     | [monitor] control thread has ended
[2026-01-26 03:47:16] 2026-01-26 02:47:16,900 [wrapper] ==== pilot stdout END ====
[2026-01-26 03:47:16] 2026-01-26 02:47:16,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 03:47:16] 2026-01-26 02:47:16,904 [wrapper] pilotpid: 2142605
[2026-01-26 03:47:16] 2026-01-26 02:47:16,907 [wrapper] Pilot exit status: 0
[2026-01-26 03:47:16] 2026-01-26 02:47:16,912 [wrapper] pandaids: 6982689729
[2026-01-26 03:47:16] 2026-01-26 02:47:16,924 [wrapper] cleanup supervisor_pilot 2151820 2142606
[2026-01-26 03:47:16] 2026-01-26 02:47:16,926 [wrapper] Test setup, not cleaning
[2026-01-26 03:47:16] 2026-01-26 02:47:16,928 [wrapper] apfmon messages muted
[2026-01-26 03:47:16] 2026-01-26 02:47:16,930 [wrapper] ==== wrapper stdout END ====
[2026-01-26 03:47:16] 2026-01-26 02:47:16,932 [wrapper] ==== wrapper stderr END ====
[2026-01-26 03:47:16]  *** Error codes and diagnostics ***
[2026-01-26 03:47:16]     "exeErrorCode": 0,
[2026-01-26 03:47:16]     "exeErrorDiag": "",
[2026-01-26 03:47:16]     "pilotErrorCode": 0,
[2026-01-26 03:47:16]     "pilotErrorDiag": "",
[2026-01-26 03:47:16]  *** Listing of results directory ***
[2026-01-26 03:47:16] total 668928
[2026-01-26 03:47:16] -rwx------ 1 boinc boinc     36322 Jan 25 06:14 runpilot2-wrapper.sh
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc      5111 Jan 25 06:15 queuedata.json
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc    584422 Jan 25 06:15 pilot3.tar.gz
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc       100 Jan 26 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 03:47:16] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 01:52 run_atlas
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc       105 Jan 26 01:52 job.xml
[2026-01-26 03:47:16] -rw-r--r-- 2 boinc boinc 498040073 Jan 26 01:52 EVNT.48310824._000111.pool.root.1
[2026-01-26 03:47:16] -rw-r--r-- 2 boinc boinc    597757 Jan 26 01:52 input.tar.gz
[2026-01-26 03:47:16] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:52 start_atlas.sh
[2026-01-26 03:47:16] drwxrwx--x 2 boinc boinc      4096 Jan 26 01:52 shared
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc         0 Jan 26 01:52 boinc_setup_complete
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc      6207 Jan 26 01:52 init_data.xml
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc         0 Jan 26 01:52 boinc_lockfile
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc      2523 Jan 26 01:52 pandaJob.out
[2026-01-26 03:47:16] -rw------- 1 boinc boinc   1004246 Jan 26 01:52 agis_schedconf.cvmfs.json
[2026-01-26 03:47:16] -rw------- 1 boinc boinc   1516246 Jan 26 01:52 agis_ddmendpoints.agis.ALL.json
[2026-01-26 03:47:16] -rw------- 1 boinc boinc       420 Jan 26 01:52 workernode_map.json
[2026-01-26 03:47:16] drwx------ 5 boinc boinc      4096 Jan 26 01:52 pilot3
[2026-01-26 03:47:16] -rw------- 1 boinc boinc 180533178 Jan 26 03:46 HITS.48310826._009620.pool.root.1
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc       530 Jan 26 03:46 boinc_task_state.xml
[2026-01-26 03:47:16] -rw------- 1 boinc boinc      1011 Jan 26 03:46 memory_monitor_summary.json
[2026-01-26 03:47:16] -rw------- 1 boinc boinc    256096 Jan 26 03:46 log.48310826._009620.job.log.tgz.1
[2026-01-26 03:47:16] -rw------- 1 boinc boinc      6289 Jan 26 03:46 heartbeat.json
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc        27 Jan 26 03:47 wrapper_checkpoint.txt
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc      8192 Jan 26 03:47 boinc_mmap_file
[2026-01-26 03:47:16] -rw------- 1 boinc boinc       747 Jan 26 03:47 pilotlog.txt
[2026-01-26 03:47:16] -rw------- 1 boinc boinc        95 Jan 26 03:47 pilot_heartbeat.json
[2026-01-26 03:47:16] -rw------- 1 boinc boinc    986352 Jan 26 03:47 log.48310826._009620.job.log.1
[2026-01-26 03:47:16] -rw------- 1 boinc boinc       357 Jan 26 03:47 output.list
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc       620 Jan 26 03:47 runtime_log
[2026-01-26 03:47:16] -rw------- 1 boinc boinc   1259520 Jan 26 03:47 result.tar.gz
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc      8901 Jan 26 03:47 runtime_log.err
[2026-01-26 03:47:16] -rw------- 1 boinc boinc       658 Jan 26 03:47 Q30MDmQd738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuo6KDmgloFcn.diag
[2026-01-26 03:47:16] -rw-r--r-- 1 boinc boinc      8725 Jan 26 03:47 stderr.txt
[2026-01-26 03:47:17] HITS file was successfully produced:
[2026-01-26 03:47:17] -rw------- 1 boinc boinc 180533178 Jan 26 03:46 shared/HITS.pool.root.1
[2026-01-26 03:47:17]  *** Contents of shared directory: ***
[2026-01-26 03:47:17] total 664512
[2026-01-26 03:47:17] -rw-r--r-- 2 boinc boinc 498040073 Jan 26 01:52 ATLAS.root_0
[2026-01-26 03:47:17] -rw-r--r-- 2 boinc boinc    597757 Jan 26 01:52 input.tar.gz
[2026-01-26 03:47:17] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:52 start_atlas.sh
[2026-01-26 03:47:17] -rw------- 1 boinc boinc 180533178 Jan 26 03:46 HITS.pool.root.1
[2026-01-26 03:47:17] -rw------- 1 boinc boinc   1259520 Jan 26 03:47 result.tar.gz
03:47:18 (2138577): run_atlas exited; CPU time 13282.688039
03:47:18 (2138577): called boinc_finish(0)

</stderr_txt>
]]>

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