Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:07:12 (13539): wrapper (7.7.26015): starting
14:07:12 (13539): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 14:07:12] Arguments: --nthreads 8
[2026-01-25 14:07:12] Threads: 8
[2026-01-25 14:07:12] Checking for CVMFS
[2026-01-25 14:07:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 14:07:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 14:07:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 14:07:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 14:07:12] 2.11.2.0 2781 158408 87296 155518 2 49 11233487 20275200 1 130560 0 43447737 99.839 10492161 29884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 14:07:12] CVMFS is ok
[2026-01-25 14:07:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 14:07:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 14:07:12] Further information can be found at the LHC@home message board.
[2026-01-25 14:07:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 14:07:12] Checking for apptainer binary...
[2026-01-25 14:07:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 14:07:12] Running /usr/bin/apptainer --version
[2026-01-25 14:07:12] apptainer version 1.3.2-1.el7
[2026-01-25 14:07:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 14:07:14] c-115-16.aglt2.org
[2026-01-25 14:07:14] apptainer works
[2026-01-25 14:07:14] Set ATHENA_PROC_NUMBER=8
[2026-01-25 14:07:14] Set ATHENA_CORE_NUMBER=8
[2026-01-25 14:07:14] Starting ATLAS job with PandaID=6983014515
[2026-01-25 14:07:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 16:01:54]  *** The last 200 lines of the pilot log: ***
[2026-01-25 16:01:54] 2026-01-25 21:00:54,531 | INFO     | mean x: 1769371742.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,531 | INFO     | mean y: 2512073.0693069305
[2026-01-25 16:01:54] 2026-01-25 21:00:54,531 | INFO     | intersect: -7237661748.429822
[2026-01-25 16:01:54] 2026-01-25 21:00:54,531 | INFO     | chi2: 0.0008339922525393513
[2026-01-25 16:01:54] 2026-01-25 21:00:54,531 | INFO     | current chi2=0.0008339922525393513 (change=97.19486803910642 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,532 | INFO     | sum of square deviations: 274312120.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,532 | INFO     | sum of deviations: 735555934.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,532 | INFO     | mean x: 1769371894.5
[2026-01-25 16:01:54] 2026-01-25 21:00:54,532 | INFO     | mean y: 2513996.0416666665
[2026-01-25 16:01:54] 2026-01-25 21:00:54,533 | INFO     | intersect: -4741979234.70693
[2026-01-25 16:01:54] 2026-01-25 21:00:54,533 | INFO     | chi2: 0.0001894186005286821
[2026-01-25 16:01:54] 2026-01-25 21:00:54,533 | INFO     | current chi2=0.0001894186005286821 (change=77.28772660034458 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,533 | INFO     | sum of square deviations: 233641590.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | sum of deviations: 506678688.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | mean x: 1769372047.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | mean y: 2514847.736263736
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | intersect: -3834572151.020397
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | chi2: 0.0001016372716539745
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | current chi2=0.0001016372716539745 (change=46.34250735128602 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,534 | INFO     | sum of square deviations: 197203697.5
[2026-01-25 16:01:54] 2026-01-25 21:00:54,535 | INFO     | sum of deviations: 353371048.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,535 | INFO     | mean x: 1769372199.5
[2026-01-25 16:01:54] 2026-01-25 21:00:54,535 | INFO     | mean y: 2515488.465116279
[2026-01-25 16:01:54] 2026-01-25 21:00:54,535 | INFO     | intersect: -3168038189.613765
[2026-01-25 16:01:54] 2026-01-25 21:00:54,535 | INFO     | chi2: 7.285716435101715e-05
[2026-01-25 16:01:54] 2026-01-25 21:00:54,536 | INFO     | current chi2=7.285716435101715e-05 (change=28.316489447827394 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,536 | INFO     | sum of square deviations: 164765880.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,536 | INFO     | sum of deviations: 223422016.00000003
[2026-01-25 16:01:54] 2026-01-25 21:00:54,536 | INFO     | mean x: 1769372352.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,536 | INFO     | mean y: 2516098.962962963
[2026-01-25 16:01:54] 2026-01-25 21:00:54,536 | INFO     | intersect: -2396747255.431173
[2026-01-25 16:01:54] 2026-01-25 21:00:54,537 | INFO     | chi2: 4.2605354456231276e-05
[2026-01-25 16:01:54] 2026-01-25 21:00:54,537 | INFO     | current chi2=4.2605354456231276e-05 (change=41.52207976285799 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,537 | INFO     | sum of square deviations: 136095575.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,537 | INFO     | sum of deviations: 143416490.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,537 | INFO     | mean x: 1769372504.5
[2026-01-25 16:01:54] 2026-01-25 21:00:54,538 | INFO     | mean y: 2516519.1052631577
[2026-01-25 16:01:54] 2026-01-25 21:00:54,538 | INFO     | intersect: -1862034875.0006745
[2026-01-25 16:01:54] 2026-01-25 21:00:54,538 | INFO     | chi2: 2.619436002369226e-05
[2026-01-25 16:01:54] 2026-01-25 21:00:54,538 | INFO     | current chi2=2.619436002369226e-05 (change=38.51861964767392 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,538 | INFO     | sum of square deviations: 110960220.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,538 | INFO     | sum of deviations: 109513543.99999996
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | mean x: 1769372657.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | mean y: 2516724.676056338
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | intersect: -1743787223.9351335
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | chi2: 2.5702212914533042e-05
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | current chi2=2.5702212914533042e-05 (change=1.8788285291722318 %)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | left removable region: 80
[2026-01-25 16:01:54] 2026-01-25 21:00:54,539 | INFO     | sum of square deviations: 4837300.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,540 | INFO     | sum of deviations: 6769536.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,540 | INFO     | mean x: 1769373694.0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,540 | INFO     | mean y: 2516952.32
[2026-01-25 16:01:54] 2026-01-25 21:00:54,540 | INFO     | intersect: -2473624473.472484
[2026-01-25 16:01:54] 2026-01-25 21:00:54,540 | INFO     | chi2: 2.0858401962150648e-06
[2026-01-25 16:01:54] 2026-01-25 21:00:54,540 | INFO     | current memory leak: 1.40 B/s (using 25 data points, chi2=0.00)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | could have reported an average CPU frequency of 1745 MHz (7 samples)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | ..............................
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . Timing measurements:
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . get job = 0 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . initial setup = 8 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . payload setup = 8 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . stage-in = 0 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . payload execution = 6770 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,541 | INFO     | . stage-out = 0 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,542 | INFO     | . log creation = 0 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,542 | INFO     | ..............................
[2026-01-25 16:01:54] 2026-01-25 21:00:54,638 | INFO     | 
[2026-01-25 16:01:54] 2026-01-25 21:00:54,638 | INFO     | job summary report
[2026-01-25 16:01:54] 2026-01-25 21:00:54,639 | INFO     | --------------------------------------------------
[2026-01-25 16:01:54] 2026-01-25 21:00:54,639 | INFO     | PanDA job id: 6983014515
[2026-01-25 16:01:54] 2026-01-25 21:00:54,639 | INFO     | task id: 48317931
[2026-01-25 16:01:54] 2026-01-25 21:00:54,639 | INFO     | errors: (none)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,639 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 16:01:54] 2026-01-25 21:00:54,640 | INFO     | pilot state: finished 
[2026-01-25 16:01:54] 2026-01-25 21:00:54,640 | INFO     | transexitcode: 0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,640 | INFO     | exeerrorcode: 0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,640 | INFO     | exeerrordiag: 
[2026-01-25 16:01:54] 2026-01-25 21:00:54,640 | INFO     | exitcode: 0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,640 | INFO     | exitmsg: OK
[2026-01-25 16:01:54] 2026-01-25 21:00:54,641 | INFO     | cpuconsumptiontime: 50133 s
[2026-01-25 16:01:54] 2026-01-25 21:00:54,641 | INFO     | nevents: 400
[2026-01-25 16:01:54] 2026-01-25 21:00:54,641 | INFO     | neventsw: 0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,641 | INFO     | pid: 21606
[2026-01-25 16:01:54] 2026-01-25 21:00:54,641 | INFO     | pgrp: 21606
[2026-01-25 16:01:54] 2026-01-25 21:00:54,641 | INFO     | corecount: 8
[2026-01-25 16:01:54] 2026-01-25 21:00:54,642 | INFO     | event service: False
[2026-01-25 16:01:54] 2026-01-25 21:00:54,642 | INFO     | sizes: {0: 2283737, 1: 2284198, 11: 2284198, 6782: 2311329, 6785: 2320383, 6787: 2320521}
[2026-01-25 16:01:54] 2026-01-25 21:00:54,642 | INFO     | --------------------------------------------------
[2026-01-25 16:01:54] 2026-01-25 21:00:54,642 | INFO     | 
[2026-01-25 16:01:54] 2026-01-25 21:00:54,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 16:01:54] 2026-01-25 21:00:54,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,670 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,670 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,673 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,673 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 16:01:54] 2026-01-25 21:00:54,674 | INFO     | job 6983014515 has completed (purged errors)
[2026-01-25 16:01:54] 2026-01-25 21:00:54,674 | INFO     | overall cleanup function is called
[2026-01-25 16:01:54] 2026-01-25 21:00:55,677 | INFO     | --- collectZombieJob: --- 10, [21606]
[2026-01-25 16:01:54] 2026-01-25 21:00:55,678 | INFO     | zombie collector waiting for pid 21606
[2026-01-25 16:01:54] 2026-01-25 21:00:55,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 16:01:54] 2026-01-25 21:00:55,678 | INFO     | collected zombie processes
[2026-01-25 16:01:54] 2026-01-25 21:00:55,678 | INFO     | will attempt to kill all subprocesses of pid=21606
[2026-01-25 16:01:54] 2026-01-25 21:00:55,762 | INFO     | process IDs to be killed: [21606] (in reverse order)
[2026-01-25 16:01:54] 2026-01-25 21:00:55,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 16:01:54] 2026-01-25 21:00:55,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 16:01:54] 2026-01-25 21:00:55,822 | INFO     | did not find any defunct processes belonging to 21606
[2026-01-25 16:01:54] 2026-01-25 21:00:55,826 | INFO     | did not find any defunct processes belonging to 21606
[2026-01-25 16:01:54] 2026-01-25 21:00:55,826 | INFO     | ready for new job
[2026-01-25 16:01:54] 2026-01-25 21:00:55,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 16:01:54] 2026-01-25 21:00:55,828 | INFO     | **************************************
[2026-01-25 16:01:54] 2026-01-25 21:00:55,828 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 16:01:54] 2026-01-25 21:00:55,828 | INFO     | **************************************
[2026-01-25 16:01:54] 2026-01-25 21:00:55,829 | INFO     | 
[2026-01-25 16:01:54] 2026-01-25 21:00:55,829 | INFO     | architecture information:
[2026-01-25 16:01:54] 2026-01-25 21:00:55,830 | INFO     | executing command: cat /etc/os-release
[2026-01-25 16:01:54] 2026-01-25 21:00:55,848 | INFO     | cat /etc/os-release:
[2026-01-25 16:01:54] NAME="CentOS Linux"
[2026-01-25 16:01:54] VERSION="7 (Core)"
[2026-01-25 16:01:54] ID="centos"
[2026-01-25 16:01:54] ID_LIKE="rhel fedora"
[2026-01-25 16:01:54] VERSION_ID="7"
[2026-01-25 16:01:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 16:01:54] ANSI_COLOR="0;31"
[2026-01-25 16:01:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 16:01:54] HOME_URL="https://www.centos.org/"
[2026-01-25 16:01:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 16:01:54] 
[2026-01-25 16:01:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 16:01:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 16:01:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 16:01:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 16:01:54] 
[2026-01-25 16:01:54] 2026-01-25 21:00:55,848 | INFO     | **************************************
[2026-01-25 16:01:54] 2026-01-25 21:00:56,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 16:01:54] 2026-01-25 21:00:56,368 | INFO     | sufficient remaining disk space (18023972864 B)
[2026-01-25 16:01:54] 2026-01-25 21:00:56,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 16:01:54] 2026-01-25 21:00:56,369 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 16:01:54] 2026-01-25 21:00:56,369 | INFO     | update_server=False
[2026-01-25 16:01:54] 2026-01-25 21:00:56,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 16:01:54] 2026-01-25 21:00:56,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 16:01:54] 2026-01-25 21:00:56,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 16:01:54] 2026-01-25 21:00:56,952 | INFO     | all data control threads have been joined
[2026-01-25 16:01:54] 2026-01-25 21:00:56,999 | INFO     | all job control threads have been joined
[2026-01-25 16:01:54] 2026-01-25 21:00:57,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 16:01:54] 2026-01-25 21:00:57,267 | INFO     | aborting loop
[2026-01-25 16:01:54] 2026-01-25 21:00:57,375 | INFO     | [job] retrieve thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,376 | INFO     | [job] queue monitor thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,640 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,660 | INFO     | [payload] validate_post thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,693 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,745 | INFO     | all payload control threads have been joined
[2026-01-25 16:01:54] 2026-01-25 21:00:57,776 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,892 | INFO     | [data] copytool_in thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:57,958 | INFO     | [data] control thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,004 | INFO     | [job] control thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,273 | INFO     | [job] job monitor thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,376 | INFO     | [data] copytool_out thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,382 | INFO     | [payload] failed_post thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,516 | INFO     | [job] validate thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 16:01:54] 2026-01-25 21:00:58,663 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:00:58,750 | INFO     | [payload] control thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:01:02,573 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 16:01:54] 2026-01-25 21:01:26,979 | INFO     | PID=17227 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 16:01:54] 2026-01-25 21:01:26,980 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 16:01:54] 2026-01-25 21:01:26,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 16:01:54] 2026-01-25 21:01:26,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 16:01:54] 2026-01-25 21:01:47,443 | INFO     | [monitor] cgroup control has ended
[2026-01-25 16:01:54] 2026-01-25 21:01:48,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923055441728)>', '<ExcThread(monitor, started 139922065299200)>']
[2026-01-25 16:01:54] 2026-01-25 21:01:49,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 16:01:54] 2026-01-25 21:01:49,084 | INFO     | [monitor] control thread has ended
[2026-01-25 16:01:54] 2026-01-25 21:01:53,844 | INFO     | all workflow threads have been joined
[2026-01-25 16:01:54] 2026-01-25 21:01:53,845 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 16:01:54] 2026-01-25 21:01:53,845 | INFO     | traces error code: 0
[2026-01-25 16:01:54] 2026-01-25 21:01:53,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 16:01:54] 2026-01-25 21:01:53,958 [wrapper] ==== pilot stdout END ====
[2026-01-25 16:01:54] 2026-01-25 21:01:53,963 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 16:01:54] 2026-01-25 21:01:53,968 [wrapper] pilotpid: 17227
[2026-01-25 16:01:54] 2026-01-25 21:01:53,973 [wrapper] Pilot exit status: 0
[2026-01-25 16:01:54] 2026-01-25 21:01:53,991 [wrapper] pandaids: 6983014515
[2026-01-25 16:01:54] 2026-01-25 21:01:54,040 [wrapper] cleanup supervisor_pilot 30617 17228
[2026-01-25 16:01:54] 2026-01-25 21:01:54,045 [wrapper] Test setup, not cleaning
[2026-01-25 16:01:54] 2026-01-25 21:01:54,050 [wrapper] apfmon messages muted
[2026-01-25 16:01:54] 2026-01-25 21:01:54,054 [wrapper] ==== wrapper stdout END ====
[2026-01-25 16:01:54] 2026-01-25 21:01:54,059 [wrapper] ==== wrapper stderr END ====
[2026-01-25 16:01:54]  *** Error codes and diagnostics ***
[2026-01-25 16:01:54]     "exeErrorCode": 0,
[2026-01-25 16:01:54]     "exeErrorDiag": "",
[2026-01-25 16:01:54]     "pilotErrorCode": 0,
[2026-01-25 16:01:54]     "pilotErrorDiag": "",
[2026-01-25 16:01:54]  *** Listing of results directory ***
[2026-01-25 16:01:54] total 669524
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 09:11 pilot3.tar.gz
[2026-01-25 16:01:54] -rwx------ 1 boincer umatlas     36322 Jan 25 09:14 runpilot2-wrapper.sh
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 09:18 queuedata.json
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas       100 Jan 25 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 16:01:54] -rwxr-xr-x 1 boincer umatlas      7986 Jan 25 14:07 run_atlas
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas       105 Jan 25 14:07 job.xml
[2026-01-25 16:01:54] -rw-r--r-- 2 boincer umatlas 498119121 Jan 25 14:07 EVNT.48317929._000011.pool.root.1
[2026-01-25 16:01:54] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 14:07 start_atlas.sh
[2026-01-25 16:01:54] drwxrwx--x 2 boincer umatlas      4096 Jan 25 14:07 shared
[2026-01-25 16:01:54] -rw-r--r-- 2 boincer umatlas    597752 Jan 25 14:07 input.tar.gz
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas         0 Jan 25 14:07 boinc_lockfile
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas      2505 Jan 25 14:07 pandaJob.out
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas        57 Jan 25 14:07 setup.sh.local
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas   1004246 Jan 25 14:07 agis_schedconf.cvmfs.json
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas   1516246 Jan 25 14:07 agis_ddmendpoints.agis.ALL.json
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas       432 Jan 25 14:07 workernode_map.json
[2026-01-25 16:01:54] drwx------ 5 boincer umatlas      4096 Jan 25 14:07 pilot3
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas      5910 Jan 25 15:56 init_data.xml
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas 180879924 Jan 25 16:00 HITS.48317931._000523.pool.root.1
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas       530 Jan 25 16:00 boinc_task_state.xml
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas      1047 Jan 25 16:00 memory_monitor_summary.json
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas    353849 Jan 25 16:00 log.48317931._000523.job.log.tgz.1
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas      6393 Jan 25 16:00 heartbeat.json
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas        95 Jan 25 16:01 pilot_heartbeat.json
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas      8192 Jan 25 16:01 boinc_mmap_file
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas        27 Jan 25 16:01 wrapper_checkpoint.txt
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas      4742 Jan 25 16:01 pilotlog.txt
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas    967859 Jan 25 16:01 log.48317931._000523.job.log.1
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas       357 Jan 25 16:01 output.list
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas       620 Jan 25 16:01 runtime_log
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas   1341440 Jan 25 16:01 result.tar.gz
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas      9341 Jan 25 16:01 runtime_log.err
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas       658 Jan 25 16:01 mfQODmv3F48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK90KDm09Ik3n.diag
[2026-01-25 16:01:54] -rw-r--r-- 1 boincer umatlas     20862 Jan 25 16:01 stderr.txt
[2026-01-25 16:01:54] HITS file was successfully produced:
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas 180879924 Jan 25 16:00 shared/HITS.pool.root.1
[2026-01-25 16:01:54]  *** Contents of shared directory: ***
[2026-01-25 16:01:54] total 665008
[2026-01-25 16:01:54] -rw-r--r-- 2 boincer umatlas 498119121 Jan 25 14:07 ATLAS.root_0
[2026-01-25 16:01:54] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 14:07 start_atlas.sh
[2026-01-25 16:01:54] -rw-r--r-- 2 boincer umatlas    597752 Jan 25 14:07 input.tar.gz
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas 180879924 Jan 25 16:00 HITS.pool.root.1
[2026-01-25 16:01:54] -rw------- 1 boincer umatlas   1341440 Jan 25 16:01 result.tar.gz
16:01:56 (13539): run_atlas exited; CPU time 50101.459102
16:01:56 (13539): called boinc_finish(0)

</stderr_txt>
]]>

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