Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:59:24 (2266051): wrapper (7.7.26015): starting
09:59:24 (2266051): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 09:59:24] Arguments: --nthreads 4
[2026-01-27 09:59:24] Threads: 4
[2026-01-27 09:59:24] Checking for CVMFS
[2026-01-27 09:59:24] No cvmfs_config command found, will try listing directly
[2026-01-27 09:59:24] CVMFS is ok
[2026-01-27 09:59:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 09:59:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 09:59:24] Further information can be found at the LHC@home message board.
[2026-01-27 09:59:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 09:59:24] Checking for apptainer binary...
[2026-01-27 09:59:24] which: no apptainer in ((null))
[2026-01-27 09:59:24] apptainer is not installed, using version from CVMFS
[2026-01-27 09:59:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 09:59:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-27 09:59:24] apptainer works
[2026-01-27 09:59:24] Set ATHENA_PROC_NUMBER=4
[2026-01-27 09:59:24] Set ATHENA_CORE_NUMBER=4
[2026-01-27 09:59:24] Starting ATLAS job with PandaID=6983015933
[2026-01-27 09:59:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:12:23]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:12:23] 2026-01-27 11:57:10,581 | INFO     | intersect: -3385604607.5590606
[2026-01-27 13:12:23] 2026-01-27 11:57:10,581 | INFO     | chi2: 0.0006242621788539788
[2026-01-27 13:12:23] 2026-01-27 11:57:10,581 | INFO     | current chi2=0.0006242621788539788 (change=88.20912813647415 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,582 | INFO     | sum of square deviations: 1132458442.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,583 | INFO     | sum of deviations: 1781933372.4999995
[2026-01-27 13:12:23] 2026-01-27 11:57:10,583 | INFO     | mean x: 1769510300.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,583 | INFO     | mean y: 2324113.2662337665
[2026-01-27 13:12:23] 2026-01-27 11:57:10,583 | INFO     | intersect: -2782015990.6254396
[2026-01-27 13:12:23] 2026-01-27 11:57:10,583 | INFO     | chi2: 0.0003529046159989715
[2026-01-27 13:12:23] 2026-01-27 11:57:10,583 | INFO     | current chi2=0.0003529046159989715 (change=43.46852525218904 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,584 | INFO     | sum of square deviations: 1025693650.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,584 | INFO     | sum of deviations: 1303058637.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,585 | INFO     | mean x: 1769510453.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,585 | INFO     | mean y: 2324795.5033557047
[2026-01-27 13:12:23] 2026-01-27 11:57:10,585 | INFO     | intersect: -2245691343.6659107
[2026-01-27 13:12:23] 2026-01-27 11:57:10,585 | INFO     | chi2: 0.00015598386645756629
[2026-01-27 13:12:23] 2026-01-27 11:57:10,585 | INFO     | current chi2=0.00015598386645756629 (change=55.79999257985878 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,585 | INFO     | sum of square deviations: 925859220.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,586 | INFO     | sum of deviations: 1037224754.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,586 | INFO     | mean x: 1769510605.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,587 | INFO     | mean y: 2325201.5208333335
[2026-01-27 13:12:23] 2026-01-27 11:57:10,587 | INFO     | intersect: -1980028231.623013
[2026-01-27 13:12:23] 2026-01-27 11:57:10,587 | INFO     | chi2: 0.00011592085626449774
[2026-01-27 13:12:23] 2026-01-27 11:57:10,587 | INFO     | current chi2=0.00011592085626449774 (change=25.68407304095597 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,587 | INFO     | sum of square deviations: 832722590.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,588 | INFO     | sum of deviations: 768865533.0000001
[2026-01-27 13:12:23] 2026-01-27 11:57:10,588 | INFO     | mean x: 1769510758.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,588 | INFO     | mean y: 2325640.856115108
[2026-01-27 13:12:23] 2026-01-27 11:57:10,589 | INFO     | intersect: -1631490768.6385574
[2026-01-27 13:12:23] 2026-01-27 11:57:10,589 | INFO     | chi2: 5.622926260731932e-05
[2026-01-27 13:12:23] 2026-01-27 11:57:10,589 | INFO     | current chi2=5.622926260731932e-05 (change=51.49340298261732 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,589 | INFO     | sum of square deviations: 746051197.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,590 | INFO     | sum of deviations: 599636222.0000001
[2026-01-27 13:12:23] 2026-01-27 11:57:10,590 | INFO     | mean x: 1769510910.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,590 | INFO     | mean y: 2325937.805970149
[2026-01-27 13:12:23] 2026-01-27 11:57:10,590 | INFO     | intersect: -1419912697.713411
[2026-01-27 13:12:23] 2026-01-27 11:57:10,591 | INFO     | chi2: 3.565254064698097e-05
[2026-01-27 13:12:23] 2026-01-27 11:57:10,591 | INFO     | current chi2=3.565254064698097e-05 (change=36.59433008047289 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,591 | INFO     | sum of square deviations: 665612480.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | sum of deviations: 499267920.0000005
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | mean x: 1769511063.0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | mean y: 2326127.604651163
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | intersect: -1324962849.6708348
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | chi2: 3.187157924466561e-05
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | current chi2=3.187157924466561e-05 (change=10.605026552674378 %)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,592 | INFO     | left removable region: 90
[2026-01-27 13:12:23] 2026-01-27 11:57:10,593 | INFO     | sum of square deviations: 147126479.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,593 | INFO     | sum of deviations: 183123738.49999997
[2026-01-27 13:12:23] 2026-01-27 11:57:10,593 | INFO     | mean x: 1769512252.5
[2026-01-27 13:12:23] 2026-01-27 11:57:10,593 | INFO     | mean y: 2326902.2435897435
[2026-01-27 13:12:23] 2026-01-27 11:57:10,593 | INFO     | intersect: -2200129787.405916
[2026-01-27 13:12:23] 2026-01-27 11:57:10,593 | INFO     | chi2: 9.828930620053871e-06
[2026-01-27 13:12:23] 2026-01-27 11:57:10,594 | INFO     | current memory leak: 1.24 B/s (using 78 data points, chi2=0.00)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,594 | INFO     | could have reported an average CPU frequency of 2697 MHz (9 samples)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,594 | INFO     | ..............................
[2026-01-27 13:12:23] 2026-01-27 11:57:10,594 | INFO     | . Timing measurements:
[2026-01-27 13:12:23] 2026-01-27 11:57:10,594 | INFO     | . get job = 0 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | . initial setup = 8 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | . payload setup = 9 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | . stage-in = 0 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | . payload execution = 10616 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | . stage-out = 1 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | . log creation = 0 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,595 | INFO     | ..............................
[2026-01-27 13:12:23] 2026-01-27 11:57:10,931 | INFO     | 
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | job summary report
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | --------------------------------------------------
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | PanDA job id: 6983015933
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | task id: 48317931
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | errors: (none)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | pilot state: finished 
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | transexitcode: 0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | exeerrorcode: 0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | exeerrordiag: 
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | exitcode: 0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,932 | INFO     | exitmsg: OK
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | cpuconsumptiontime: 39962 s
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | nevents: 400
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | neventsw: 0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | pid: 2276055
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | pgrp: 2276055
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | corecount: 4
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | event service: False
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | sizes: {0: 2283755, 1: 2284216, 12: 2284216, 10629: 2313400, 10631: 2322422, 10633: 2322864}
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | --------------------------------------------------
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | 
[2026-01-27 13:12:23] 2026-01-27 11:57:10,933 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2026-01-27 13:12:23] 2026-01-27 11:57:10,966 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | job 6983015933 has completed (purged errors)
[2026-01-27 13:12:23] 2026-01-27 11:57:10,968 | INFO     | overall cleanup function is called
[2026-01-27 13:12:23] 2026-01-27 11:57:11,977 | INFO     | --- collectZombieJob: --- 10, [2276055]
[2026-01-27 13:12:23] 2026-01-27 11:57:11,977 | INFO     | zombie collector waiting for pid 2276055
[2026-01-27 13:12:23] 2026-01-27 11:57:11,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:12:23] 2026-01-27 11:57:11,977 | INFO     | collected zombie processes
[2026-01-27 13:12:23] 2026-01-27 11:57:11,978 | INFO     | will attempt to kill all subprocesses of pid=2276055
[2026-01-27 13:12:23] 2026-01-27 11:57:12,848 | INFO     | process IDs to be killed: [2276055] (in reverse order)
[2026-01-27 13:12:23] 2026-01-27 11:57:13,123 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:12:23] 2026-01-27 11:57:13,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:12:23] 2026-01-27 11:57:13,157 | INFO     | did not find any defunct processes belonging to 2276055
[2026-01-27 13:12:23] 2026-01-27 11:57:13,191 | INFO     | did not find any defunct processes belonging to 2276055
[2026-01-27 13:12:23] 2026-01-27 11:57:13,191 | INFO     | ready for new job
[2026-01-27 13:12:23] 2026-01-27 11:57:13,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:12:23] 2026-01-27 11:57:13,194 | INFO     | **************************************
[2026-01-27 13:12:23] 2026-01-27 11:57:13,194 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:12:23] 2026-01-27 11:57:13,194 | INFO     | **************************************
[2026-01-27 13:12:23] 2026-01-27 11:57:13,194 | INFO     | 
[2026-01-27 13:12:23] 2026-01-27 11:57:13,203 | INFO     | architecture information:
[2026-01-27 13:12:23] 2026-01-27 11:57:13,203 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:12:23] 2026-01-27 11:57:13,230 | INFO     | cat /etc/os-release:
[2026-01-27 13:12:23] NAME="CentOS Linux"
[2026-01-27 13:12:23] VERSION="7 (Core)"
[2026-01-27 13:12:23] ID="centos"
[2026-01-27 13:12:23] ID_LIKE="rhel fedora"
[2026-01-27 13:12:23] VERSION_ID="7"
[2026-01-27 13:12:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:12:23] ANSI_COLOR="0;31"
[2026-01-27 13:12:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:12:23] HOME_URL="https://www.centos.org/"
[2026-01-27 13:12:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:12:23] 
[2026-01-27 13:12:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:12:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:12:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:12:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:12:23] 
[2026-01-27 13:12:23] 2026-01-27 11:57:13,230 | INFO     | **************************************
[2026-01-27 13:12:23] 2026-01-27 11:57:13,733 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2026-01-27 13:12:23] 2026-01-27 11:57:13,759 | INFO     | sufficient remaining disk space (3277235159040 B)
[2026-01-27 13:12:23] 2026-01-27 11:57:13,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:12:23] 2026-01-27 11:57:13,760 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:12:23] 2026-01-27 11:57:13,760 | INFO     | update_server=False
[2026-01-27 13:12:23] 2026-01-27 11:57:13,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:12:23] 2026-01-27 11:57:13,981 | INFO     | all data control threads have been joined
[2026-01-27 13:12:23] 2026-01-27 11:57:14,031 | INFO     | all payload control threads have been joined
[2026-01-27 13:12:23] 2026-01-27 11:57:14,101 | INFO     | all job control threads have been joined
[2026-01-27 13:12:23] 2026-01-27 11:57:14,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:12:23] 2026-01-27 11:57:14,228 | INFO     | aborting loop
[2026-01-27 13:12:23] 2026-01-27 11:57:14,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:12:23] 2026-01-27 11:57:14,765 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:14,771 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:14,941 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:14,986 | INFO     | [data] control thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,036 | INFO     | [payload] control thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,048 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,058 | INFO     | [job] validate thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,106 | INFO     | [job] control thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,233 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,490 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:15,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:12:23] 2026-01-27 11:57:15,735 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:16,264 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:16,266 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:16,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:12:23] 2026-01-27 11:57:16,707 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:20,559 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:24,266 | INFO     | job.realtimelogging is not enabled
[2026-01-27 13:12:23] 2026-01-27 11:57:25,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:12:23] 2026-01-27 11:57:43,703 | INFO     | PID=2270065 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 13:12:23] 2026-01-27 11:57:43,704 | INFO     | .. there are 11 such processes running
[2026-01-27 13:12:23] 2026-01-27 11:57:43,705 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:12:23] 2026-01-27 11:57:43,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:12:23] 2026-01-27 11:57:43,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:12:23] 2026-01-27 11:58:03,380 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:12:23] 2026-01-27 11:58:03,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22554346149696)>', '<ExcThread(monitor, started 22554105620224)>']
[2026-01-27 13:12:23] 2026-01-27 11:58:03,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:12:23] 2026-01-27 11:58:03,805 | INFO     | [monitor] control thread has ended
[2026-01-27 13:12:23] 2026-01-27 11:58:08,683 | INFO     | all workflow threads have been joined
[2026-01-27 13:12:23] 2026-01-27 11:58:08,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:12:23] 2026-01-27 11:58:08,684 | INFO     | traces error code: 0
[2026-01-27 13:12:23] 2026-01-27 11:58:08,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:12:23] 2026-01-27 11:58:08,841 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:12:23] 2026-01-27 11:58:08,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:12:23] 2026-01-27 11:58:08,849 [wrapper] pilotpid: 2270065
[2026-01-27 13:12:23] 2026-01-27 11:58:08,852 [wrapper] Pilot exit status: 0
[2026-01-27 13:12:23] 2026-01-27 11:58:08,870 [wrapper] pandaids: 6983015933
[2026-01-27 13:12:23] 2026-01-27 11:58:09,054 [wrapper] cleanup supervisor_pilot 2500699 2270066
[2026-01-27 13:12:23] 2026-01-27 11:58:09,060 [wrapper] Test setup, not cleaning
[2026-01-27 13:12:23] 2026-01-27 11:58:09,067 [wrapper] apfmon messages muted
[2026-01-27 13:12:23] 2026-01-27 11:58:09,074 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:12:23] 2026-01-27 11:58:09,078 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:12:23]  *** Error codes and diagnostics ***
[2026-01-27 13:12:23]     "exeErrorCode": 0,
[2026-01-27 13:12:23]     "exeErrorDiag": "",
[2026-01-27 13:12:23]     "pilotErrorCode": 0,
[2026-01-27 13:12:23]     "pilotErrorDiag": "",
[2026-01-27 13:12:23]  *** Listing of results directory ***
[2026-01-27 13:12:23] total 672348
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc    584422 Jan 25 15:11 pilot3.tar.gz
[2026-01-27 13:12:23] -rwx------ 1 boinc boinc     36322 Jan 25 15:11 runpilot2-wrapper.sh
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc      5111 Jan 25 15:11 queuedata.json
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc       100 Jan 27 09:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:12:23] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 09:59 run_atlas
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc       105 Jan 27 09:59 job.xml
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc      6692 Jan 27 09:59 init_data.xml
[2026-01-27 13:12:23] -rw-r--r-- 2 boinc boinc 498665641 Jan 27 09:59 EVNT.48317929._000024.pool.root.1
[2026-01-27 13:12:23] -rw-r--r-- 2 boinc boinc     15845 Jan 27 09:59 start_atlas.sh
[2026-01-27 13:12:23] drwxrwx--x 2 boinc boinc      4096 Jan 27 09:59 shared
[2026-01-27 13:12:23] -rw-r--r-- 2 boinc boinc    597760 Jan 27 09:59 input.tar.gz
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc         0 Jan 27 09:59 boinc_lockfile
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc      2508 Jan 27 09:59 pandaJob.out
[2026-01-27 13:12:23] -rw------- 1 boinc boinc   1003573 Jan 27 09:59 agis_schedconf.cvmfs.json
[2026-01-27 13:12:23] -rw------- 1 boinc boinc   1516246 Jan 27 09:59 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:12:23] -rw------- 1 boinc boinc       440 Jan 27 09:59 workernode_map.json
[2026-01-27 13:12:23] drwx------ 5 boinc boinc      4096 Jan 27 09:59 pilot3
[2026-01-27 13:12:23] -rw------- 1 boinc boinc 182186380 Jan 27 12:56 HITS.48317931._001210.pool.root.1
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc       529 Jan 27 12:56 boinc_task_state.xml
[2026-01-27 13:12:23] -rw------- 1 boinc boinc      1028 Jan 27 12:57 memory_monitor_summary.json
[2026-01-27 13:12:23] -rw------- 1 boinc boinc    386648 Jan 27 12:57 log.48317931._001210.job.log.tgz.1
[2026-01-27 13:12:23] -rw------- 1 boinc boinc      6350 Jan 27 12:57 heartbeat.json
[2026-01-27 13:12:23] -rw------- 1 boinc boinc        95 Jan 27 12:57 pilot_heartbeat.json
[2026-01-27 13:12:23] -rw------- 1 boinc boinc      4905 Jan 27 12:58 pilotlog.txt
[2026-01-27 13:12:23] -rw------- 1 boinc boinc   1457166 Jan 27 12:58 log.48317931._001210.job.log.1
[2026-01-27 13:12:23] -rw------- 1 boinc boinc       357 Jan 27 12:58 output.list
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc       620 Jan 27 12:58 runtime_log
[2026-01-27 13:12:23] -rw------- 1 boinc boinc   1863680 Jan 27 12:58 result.tar.gz
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc      9222 Jan 27 12:58 runtime_log.err
[2026-01-27 13:12:23] -rw------- 1 boinc boinc       666 Jan 27 12:58 nTQMDmB1F48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmz10KDmXOuDjn.diag
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc        26 Jan 27 13:12 wrapper_checkpoint.txt
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc      8192 Jan 27 13:12 boinc_mmap_file
[2026-01-27 13:12:23] -rw-r--r-- 1 boinc boinc     20740 Jan 27 13:12 stderr.txt
[2026-01-27 13:12:23] HITS file was successfully produced:
[2026-01-27 13:12:23] -rw------- 1 boinc boinc 182186380 Jan 27 12:56 shared/HITS.pool.root.1
[2026-01-27 13:12:23]  *** Contents of shared directory: ***
[2026-01-27 13:12:23] total 667328
[2026-01-27 13:12:23] -rw-r--r-- 2 boinc boinc 498665641 Jan 27 09:59 ATLAS.root_0
[2026-01-27 13:12:23] -rw-r--r-- 2 boinc boinc     15845 Jan 27 09:59 start_atlas.sh
[2026-01-27 13:12:23] -rw-r--r-- 2 boinc boinc    597760 Jan 27 09:59 input.tar.gz
[2026-01-27 13:12:23] -rw------- 1 boinc boinc 182186380 Jan 27 12:56 HITS.pool.root.1
[2026-01-27 13:12:23] -rw------- 1 boinc boinc   1863680 Jan 27 12:58 result.tar.gz
13:12:24 (2266051): run_atlas exited; CPU time 40699.286792
13:12:24 (2266051): called boinc_finish(0)

</stderr_txt>
]]>

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