Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:59:22 (738983): wrapper (7.7.26015): starting
15:59:22 (738983): wrapper: running run_atlas (--nthreads 6)
[2026-01-28 15:59:22] Arguments: --nthreads 6
[2026-01-28 15:59:22] Threads: 6
[2026-01-28 15:59:22] Checking for CVMFS
[2026-01-28 15:59:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 15:59:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 15:59:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 15:59:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 15:59:57] 2.13.3.0 739238 0 31836 155622 3 1 3896404 4096001 0 130560 0 0 0.000 1336 282 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-28 15:59:57] CVMFS is ok
[2026-01-28 15:59:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 15:59:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 15:59:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-28 15:59:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-28 15:59:57] Further information can be found at the LHC@home message board.
[2026-01-28 15:59:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 15:59:57] Checking for apptainer binary...
[2026-01-28 15:59:57] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2026-01-28 15:59:57] apptainer is not installed, using version from CVMFS
[2026-01-28 15:59:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 16:00:45] cachyos
[2026-01-28 16:00:45] apptainer works
[2026-01-28 16:00:45] Set ATHENA_PROC_NUMBER=6
[2026-01-28 16:00:45] Set ATHENA_CORE_NUMBER=6
[2026-01-28 16:00:45] Starting ATLAS job with PandaID=6983015530
[2026-01-28 16:00:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc1/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 18:26:29]  *** The last 200 lines of the pilot log: ***
[2026-01-28 18:26:29] 2026-01-28 17:25:55,944 | INFO     | intersect: -434589967535.69403
[2026-01-28 18:26:29] 2026-01-28 17:25:55,944 | INFO     | chi2: 14.644637324193578
[2026-01-28 18:26:29] 2026-01-28 17:25:55,944 | INFO     | current chi2=14.644637324193578 (change=5.027565750171186 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,945 | INFO     | right removable region: 133
[2026-01-28 18:26:29] 2026-01-28 17:25:55,945 | INFO     | sum of square deviations: 746021637.3134332
[2026-01-28 18:26:29] 2026-01-28 17:25:55,945 | INFO     | sum of deviations: 129650448787.52237
[2026-01-28 18:26:29] 2026-01-28 17:25:55,946 | INFO     | mean x: 1769617074.5373135
[2026-01-28 18:26:29] 2026-01-28 17:25:55,946 | INFO     | mean y: 2594852.395522388
[2026-01-28 18:26:29] 2026-01-28 17:25:55,946 | INFO     | intersect: -307537610981.3822
[2026-01-28 18:26:29] 2026-01-28 17:25:55,946 | INFO     | chi2: 9.509097052933651
[2026-01-28 18:26:29] 2026-01-28 17:25:55,946 | INFO     | current chi2=9.509097052933651 (change=38.33223215825098 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,946 | INFO     | sum of square deviations: 665581394.8062029
[2026-01-28 18:26:29] 2026-01-28 17:25:55,947 | INFO     | sum of deviations: 80758677283.76744
[2026-01-28 18:26:29] 2026-01-28 17:25:55,947 | INFO     | mean x: 1769617227.0387597
[2026-01-28 18:26:29] 2026-01-28 17:25:55,947 | INFO     | mean y: 2687516.0465116277
[2026-01-28 18:26:29] 2026-01-28 17:25:55,947 | INFO     | intersect: -214714772541.30716
[2026-01-28 18:26:29] 2026-01-28 17:25:55,948 | INFO     | chi2: 4.716683485469986
[2026-01-28 18:26:29] 2026-01-28 17:25:55,948 | INFO     | current chi2=4.716683485469986 (change=50.39819807060606 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,948 | INFO     | sum of square deviations: 591141264.7983859
[2026-01-28 18:26:29] 2026-01-28 17:25:55,948 | INFO     | sum of deviations: 45612616338.475815
[2026-01-28 18:26:29] 2026-01-28 17:25:55,949 | INFO     | mean x: 1769617379.5403225
[2026-01-28 18:26:29] 2026-01-28 17:25:55,949 | INFO     | mean y: 2759325.60483871
[2026-01-28 18:26:29] 2026-01-28 17:25:55,949 | INFO     | intersect: -136541385712.89268
[2026-01-28 18:26:29] 2026-01-28 17:25:55,949 | INFO     | chi2: 2.528828797177769
[2026-01-28 18:26:29] 2026-01-28 17:25:55,949 | INFO     | current chi2=2.528828797177769 (change=46.38544636357366 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,949 | INFO     | sum of square deviations: 522468684.78991646
[2026-01-28 18:26:29] 2026-01-28 17:25:55,950 | INFO     | sum of deviations: 19694629695.882362
[2026-01-28 18:26:29] 2026-01-28 17:25:55,950 | INFO     | mean x: 1769617532.0420167
[2026-01-28 18:26:29] 2026-01-28 17:25:55,950 | INFO     | mean y: 2816731.8235294116
[2026-01-28 18:26:29] 2026-01-28 17:25:55,950 | INFO     | intersect: -66703500816.99312
[2026-01-28 18:26:29] 2026-01-28 17:25:55,951 | INFO     | chi2: 1.3773223876864282
[2026-01-28 18:26:29] 2026-01-28 17:25:55,951 | INFO     | current chi2=1.3773223876864282 (change=45.53516674503424 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,951 | INFO     | sum of square deviations: 459366752.5
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | sum of deviations: 1739104479.5
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | mean x: 1769617684.5
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | mean y: 2860023.9210526315
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | intersect: -6696688921.159311
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | chi2: 0.7986767085095305
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | current chi2=0.7986767085095305 (change=42.0123628534699 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,952 | INFO     | sum of square deviations: 401533110.0
[2026-01-28 18:26:29] 2026-01-28 17:25:55,953 | INFO     | sum of deviations: -5741127972.0
[2026-01-28 18:26:29] 2026-01-28 17:25:55,953 | INFO     | mean x: 1769617837.0
[2026-01-28 18:26:29] 2026-01-28 17:25:55,953 | INFO     | mean y: 2879622.1651376146
[2026-01-28 18:26:29] 2026-01-28 17:25:55,953 | INFO     | intersect: 25304908796.672905
[2026-01-28 18:26:29] 2026-01-28 17:25:55,953 | INFO     | chi2: 0.6807490280647411
[2026-01-28 18:26:29] 2026-01-28 17:25:55,953 | INFO     | current chi2=0.6807490280647411 (change=14.765383688834866 %)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,954 | INFO     | left removable region: 60
[2026-01-28 18:26:29] 2026-01-28 17:25:55,954 | INFO     | sum of square deviations: 120605052.0
[2026-01-28 18:26:29] 2026-01-28 17:25:55,954 | INFO     | sum of deviations: 216546523.0
[2026-01-28 18:26:29] 2026-01-28 17:25:55,954 | INFO     | mean x: 1769618569.0
[2026-01-28 18:26:29] 2026-01-28 17:25:55,954 | INFO     | mean y: 2907032.7397260275
[2026-01-28 18:26:29] 2026-01-28 17:25:55,954 | INFO     | intersect: -3174445340.137536
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | chi2: 1.8459142758028903e-05
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | current memory leak: 1.80 B/s (using 73 data points, chi2=0.00)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | could have reported an average CPU frequency of 1918 MHz (8 samples)
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | ..............................
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | . Timing measurements:
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | . get job = 0 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | . initial setup = 16 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,955 | INFO     | . payload setup = 124 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,956 | INFO     | . stage-in = 0 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,956 | INFO     | . payload execution = 8437 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,956 | INFO     | . stage-out = 0 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,956 | INFO     | . log creation = 0 s
[2026-01-28 18:26:29] 2026-01-28 17:25:55,956 | INFO     | ..............................
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | 
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | job summary report
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | --------------------------------------------------
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | PanDA job id: 6983015530
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | task id: 48317931
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | errors: (none)
[2026-01-28 18:26:29] 2026-01-28 17:25:56,049 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | pilot state: finished 
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | transexitcode: 0
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | exeerrorcode: 0
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | exeerrordiag: 
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | exitcode: 0
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | exitmsg: OK
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | cpuconsumptiontime: 39330 s
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | nevents: 400
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | neventsw: 0
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | pid: 753867
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | pgrp: 753867
[2026-01-28 18:26:29] 2026-01-28 17:25:56,050 | INFO     | corecount: 6
[2026-01-28 18:26:29] 2026-01-28 17:25:56,051 | INFO     | event service: False
[2026-01-28 18:26:29] 2026-01-28 17:25:56,051 | INFO     | sizes: {0: 2283080, 1: 2284199, 8566: 2312045, 8567: 2321045, 8570: 2321101, 8573: 2321295}
[2026-01-28 18:26:29] 2026-01-28 17:25:56,051 | INFO     | --------------------------------------------------
[2026-01-28 18:26:29] 2026-01-28 17:25:56,051 | INFO     | 
[2026-01-28 18:26:29] 2026-01-28 17:25:56,051 | INFO     | executing command: ls -lF /var/lib/boinc1/slots/0
[2026-01-28 18:26:29] 2026-01-28 17:25:56,070 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,070 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,070 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,070 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | job 6983015530 has completed (purged errors)
[2026-01-28 18:26:29] 2026-01-28 17:25:56,072 | INFO     | overall cleanup function is called
[2026-01-28 18:26:29] 2026-01-28 17:25:57,125 | INFO     | --- collectZombieJob: --- 10, [753867]
[2026-01-28 18:26:29] 2026-01-28 17:25:57,125 | INFO     | zombie collector waiting for pid 753867
[2026-01-28 18:26:29] 2026-01-28 17:25:57,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 18:26:29] 2026-01-28 17:25:57,126 | INFO     | collected zombie processes
[2026-01-28 18:26:29] 2026-01-28 17:25:57,126 | INFO     | will attempt to kill all subprocesses of pid=753867
[2026-01-28 18:26:29] 2026-01-28 17:25:57,276 | INFO     | process IDs to be killed: [753867] (in reverse order)
[2026-01-28 18:26:29] 2026-01-28 17:25:57,331 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 18:26:29] 2026-01-28 17:25:57,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 18:26:29] 2026-01-28 17:25:57,337 | INFO     | did not find any defunct processes belonging to 753867
[2026-01-28 18:26:29] 2026-01-28 17:25:57,342 | INFO     | did not find any defunct processes belonging to 753867
[2026-01-28 18:26:29] 2026-01-28 17:25:57,342 | INFO     | ready for new job
[2026-01-28 18:26:29] 2026-01-28 17:25:57,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 18:26:29] 2026-01-28 17:25:57,344 | INFO     | **************************************
[2026-01-28 18:26:29] 2026-01-28 17:25:57,344 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 18:26:29] 2026-01-28 17:25:57,345 | INFO     | **************************************
[2026-01-28 18:26:29] 2026-01-28 17:25:57,345 | INFO     | 
[2026-01-28 18:26:29] 2026-01-28 17:25:57,346 | INFO     | architecture information:
[2026-01-28 18:26:29] 2026-01-28 17:25:57,346 | INFO     | executing command: cat /etc/os-release
[2026-01-28 18:26:29] 2026-01-28 17:25:57,358 | INFO     | cat /etc/os-release:
[2026-01-28 18:26:29] NAME="CentOS Linux"
[2026-01-28 18:26:29] VERSION="7 (Core)"
[2026-01-28 18:26:29] ID="centos"
[2026-01-28 18:26:29] ID_LIKE="rhel fedora"
[2026-01-28 18:26:29] VERSION_ID="7"
[2026-01-28 18:26:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 18:26:29] ANSI_COLOR="0;31"
[2026-01-28 18:26:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 18:26:29] HOME_URL="https://www.centos.org/"
[2026-01-28 18:26:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 18:26:29] 
[2026-01-28 18:26:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 18:26:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 18:26:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 18:26:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 18:26:29] 
[2026-01-28 18:26:29] 2026-01-28 17:25:57,358 | INFO     | **************************************
[2026-01-28 18:26:29] 2026-01-28 17:25:57,860 | INFO     | executing command: df -mP /var/lib/boinc1/slots/0
[2026-01-28 18:26:29] 2026-01-28 17:25:57,872 | INFO     | sufficient remaining disk space (18303942656 B)
[2026-01-28 18:26:29] 2026-01-28 17:25:57,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 18:26:29] 2026-01-28 17:25:57,873 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 18:26:29] 2026-01-28 17:25:57,873 | INFO     | update_server=False
[2026-01-28 18:26:29] 2026-01-28 17:25:57,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 18:26:29] 2026-01-28 17:25:57,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 18:26:29] 2026-01-28 17:25:57,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 18:26:29] 2026-01-28 17:25:57,918 | INFO     | aborting loop
[2026-01-28 18:26:29] 2026-01-28 17:25:58,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 18:26:29] 2026-01-28 17:25:58,357 | INFO     | all data control threads have been joined
[2026-01-28 18:26:29] 2026-01-28 17:25:58,658 | INFO     | all payload control threads have been joined
[2026-01-28 18:26:29] 2026-01-28 17:25:58,921 | INFO     | [job] retrieve thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:58,923 | INFO     | [job] queue monitor thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:58,923 | INFO     | [job] job monitor thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,122 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 18:26:29] 2026-01-28 17:25:59,362 | INFO     | [data] control thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,421 | INFO     | all job control threads have been joined
[2026-01-28 18:26:29] 2026-01-28 17:25:59,663 | INFO     | [payload] control thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,681 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,693 | INFO     | [job] validate thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,823 | INFO     | [payload] validate_post thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:25:59,994 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:00,079 | INFO     | [data] copytool_out thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:00,115 | INFO     | [data] copytool_in thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:00,133 | INFO     | [payload] failed_post thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:00,427 | INFO     | [job] control thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:03,245 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:08,766 | INFO     | job.realtimelogging is not enabled
[2026-01-28 18:26:29] 2026-01-28 17:26:09,771 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 18:26:29] 2026-01-28 17:26:13,954 | INFO     | [monitor] cgroup control has ended
[2026-01-28 18:26:29] 2026-01-28 17:26:14,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821324515136)>', '<ExcThread(monitor, started 139820705769216)>']
[2026-01-28 18:26:29] 2026-01-28 17:26:19,914 | INFO     | all workflow threads have been joined
[2026-01-28 18:26:29] 2026-01-28 17:26:19,915 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 18:26:29] 2026-01-28 17:26:19,915 | INFO     | traces error code: 0
[2026-01-28 18:26:29] 2026-01-28 17:26:19,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 18:26:29] 2026-01-28 17:26:28,657 | INFO     | PID=746579 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 18:26:29] 2026-01-28 17:26:28,658 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 18:26:29] 2026-01-28 17:26:28,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 18:26:29] 2026-01-28 17:26:28,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 18:26:29] 2026-01-28 17:26:28,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 18:26:29] 2026-01-28 17:26:28,658 | INFO     | [monitor] control thread has ended
[2026-01-28 18:26:29] 2026-01-28 17:26:28,751 [wrapper] ==== pilot stdout END ====
[2026-01-28 18:26:29] 2026-01-28 17:26:28,754 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 18:26:29] 2026-01-28 17:26:28,756 [wrapper] pilotpid: 746579
[2026-01-28 18:26:29] 2026-01-28 17:26:28,759 [wrapper] Pilot exit status: 0
[2026-01-28 18:26:29] 2026-01-28 17:26:28,995 [wrapper] pandaids: 6983015530
[2026-01-28 18:26:29] 2026-01-28 17:26:29,051 [wrapper] cleanup supervisor_pilot  853954 746580
[2026-01-28 18:26:29] 2026-01-28 17:26:29,054 [wrapper] Test setup, not cleaning
[2026-01-28 18:26:29] 2026-01-28 17:26:29,056 [wrapper] apfmon messages muted
[2026-01-28 18:26:29] 2026-01-28 17:26:29,058 [wrapper] ==== wrapper stdout END ====
[2026-01-28 18:26:29] 2026-01-28 17:26:29,061 [wrapper] ==== wrapper stderr END ====
[2026-01-28 18:26:29]  *** Error codes and diagnostics ***
[2026-01-28 18:26:29]     "exeErrorCode": 0,
[2026-01-28 18:26:29]     "exeErrorDiag": "",
[2026-01-28 18:26:29]     "pilotErrorCode": 0,
[2026-01-28 18:26:29]     "pilotErrorDiag": "",
[2026-01-28 18:26:29]  *** Listing of results directory ***
[2026-01-28 18:26:29] total 678128
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc    584422 25. Jan 15:11 pilot3.tar.gz
[2026-01-28 18:26:29] -rwx------ 1 boinc boinc     36322 25. Jan 15:11 runpilot2-wrapper.sh
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc      5111 25. Jan 15:11 queuedata.json
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc       100 28. Jan 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 18:26:29] -rwxr-xr-x 1 boinc boinc      7986 28. Jan 15:59 run_atlas
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc       105 28. Jan 15:59 job.xml
[2026-01-28 18:26:29] -rw-r--r-- 2 boinc boinc 503647126 28. Jan 15:59 EVNT.48317929._000018.pool.root.1
[2026-01-28 18:26:29] drwxrwx--x 1 boinc boinc        76 28. Jan 15:59 shared
[2026-01-28 18:26:29] -rw-r--r-- 2 boinc boinc    597754 28. Jan 15:59 input.tar.gz
[2026-01-28 18:26:29] -rw-r--r-- 2 boinc boinc     15845 28. Jan 15:59 start_atlas.sh
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc         0 28. Jan 15:59 boinc_setup_complete
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc         0 28. Jan 15:59 boinc_lockfile
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc      2505 28. Jan 16:00 pandaJob.out
[2026-01-28 18:26:29] -rw------- 1 boinc boinc   1005192 28. Jan 16:02 agis_schedconf.cvmfs.json
[2026-01-28 18:26:29] -rw------- 1 boinc boinc   1516246 28. Jan 16:02 agis_ddmendpoints.agis.ALL.json
[2026-01-28 18:26:29] -rw------- 1 boinc boinc       418 28. Jan 16:02 workernode_map.json
[2026-01-28 18:26:29] drwx------ 1 boinc boinc       414 28. Jan 16:03 pilot3
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc      9377 28. Jan 17:09 init_data.xml
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc       531 28. Jan 18:25 boinc_task_state.xml
[2026-01-28 18:26:29] -rw------- 1 boinc boinc 183712634 28. Jan 18:25 HITS.48317931._000881.pool.root.1
[2026-01-28 18:26:29] -rw------- 1 boinc boinc        95 28. Jan 18:25 pilot_heartbeat.json
[2026-01-28 18:26:29] -rw------- 1 boinc boinc      1033 28. Jan 18:25 memory_monitor_summary.json
[2026-01-28 18:26:29] -rw------- 1 boinc boinc    356621 28. Jan 18:25 log.48317931._000881.job.log.tgz.1
[2026-01-28 18:26:29] -rw------- 1 boinc boinc      6266 28. Jan 18:25 heartbeat.json
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc      8192 28. Jan 18:26 boinc_mmap_file
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc        27 28. Jan 18:26 wrapper_checkpoint.txt
[2026-01-28 18:26:29] -rw------- 1 boinc boinc       746 28. Jan 18:26 pilotlog.txt
[2026-01-28 18:26:29] -rw------- 1 boinc boinc   1205555 28. Jan 18:26 log.48317931._000881.job.log.1
[2026-01-28 18:26:29] -rw------- 1 boinc boinc       357 28. Jan 18:26 output.list
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc       620 28. Jan 18:26 runtime_log
[2026-01-28 18:26:29] -rw------- 1 boinc boinc   1576960 28. Jan 18:26 result.tar.gz
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc      8789 28. Jan 18:26 runtime_log.err
[2026-01-28 18:26:29] -rw------- 1 boinc boinc       643 28. Jan 18:26 3hvMDmz0F48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlz0KDmfTMO8n.diag
[2026-01-28 18:26:29] -rw-r--r-- 1 boinc boinc     21184 28. Jan 18:26 stderr.txt
[2026-01-28 18:26:29] HITS file was successfully produced:
[2026-01-28 18:26:29] -rw------- 1 boinc boinc 183712634 28. Jan 18:25 shared/HITS.pool.root.1
[2026-01-28 18:26:29]  *** Contents of shared directory: ***
[2026-01-28 18:26:29] total 673392
[2026-01-28 18:26:29] -rw-r--r-- 2 boinc boinc 503647126 28. Jan 15:59 ATLAS.root_0
[2026-01-28 18:26:29] -rw-r--r-- 2 boinc boinc    597754 28. Jan 15:59 input.tar.gz
[2026-01-28 18:26:29] -rw-r--r-- 2 boinc boinc     15845 28. Jan 15:59 start_atlas.sh
[2026-01-28 18:26:29] -rw------- 1 boinc boinc 183712634 28. Jan 18:25 HITS.pool.root.1
[2026-01-28 18:26:29] -rw------- 1 boinc boinc   1576960 28. Jan 18:26 result.tar.gz
18:26:30 (738983): run_atlas exited; CPU time 39477.530290
18:26:30 (738983): called boinc_finish(0)

</stderr_txt>
]]>

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