Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
13:48:01 (795776): wrapper (7.7.26015): starting
13:48:01 (795776): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 13:48:01] Arguments: --nthreads 4
[2026-01-26 13:48:01] Threads: 4
[2026-01-26 13:48:01] Checking for CVMFS
[2026-01-26 13:48:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:48:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:48:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:48:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:48:02] 2.13.3.0 12410 878 29704 155545 1 50 20714204 33554432 0 130560 0 586699 99.989 36732 189 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-26 13:48:02] CVMFS is ok
[2026-01-26 13:48:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:48:02] Checking for apptainer binary...
[2026-01-26 13:48:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:48:02] Running /usr/bin/apptainer --version
[2026-01-26 13:48:02] apptainer version 1.4.5
[2026-01-26 13:48:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:48:02] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-26 13:48:02] apptainer works
[2026-01-26 13:48:02] Set ATHENA_PROC_NUMBER=4
[2026-01-26 13:48:02] Set ATHENA_CORE_NUMBER=4
[2026-01-26 13:48:02] Starting ATLAS job with PandaID=6982691969
[2026-01-26 13:48:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 15:17:31]  *** The last 200 lines of the pilot log: ***
[2026-01-26 15:17:31]  storage_token=
[2026-01-26 15:17:31]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/log.48329566._000016.job.log.tgz.1
[2026-01-26 15:17:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/e3/log.48329566._000016.job.log.tgz.1
[2026-01-26 15:17:31]  workdir=None
[2026-01-26 15:17:31] ]
[2026-01-26 15:17:31] 2026-01-26 13:17:09,639 | INFO     | transferring file log.48329566._000016.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/log.48329566._000016.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-26 15:17:31] 2026-01-26 13:17:09,640 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/log.48329566._000016.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48329566._000016.job
[2026-01-26 15:17:31] 2026-01-26 13:17:09,648 | INFO     | adding to output.list: log.48329566._000016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/e3/log.48329566._000016.job.log.tg
[2026-01-26 15:17:31] 2026-01-26 13:17:09,649 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 15:17:31] 2026-01-26 13:17:09,649 | INFO     | summary of transferred files:
[2026-01-26 15:17:31] 2026-01-26 13:17:09,649 | INFO     |  -- lfn=log.48329566._000016.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 15:17:31] 2026-01-26 13:17:09,649 | INFO     | stage-out finished correctly
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | WARNING  | process 804470 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2513619 B
[2026-01-26 15:17:31] 2026-01-26 13:17:10,170 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15829 B
[2026-01-26 15:17:31] 2026-01-26 13:17:10,171 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-26 15:17:31] 2026-01-26 13:17:10,177 | INFO     | sufficient remaining disk space (68897734656 B)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,177 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,177 | INFO     | size of work directory /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969: 2822765 B (within 5033164800 B limit)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,177 | INFO     | pfn file=/home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/HITS.48329566._000016.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,177 | INFO     | total size of present files: 0 B (workdir size: 2822765 B)
[2026-01-26 15:17:31] 2026-01-26 13:17:10,178 | INFO     | output file size check: skipping output file /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/HITS.48329566._000016.pool.root.1 since it does not exist
[2026-01-26 15:17:31] 2026-01-26 13:17:10,272 | INFO     | number of running child processes to parent process 804470: 1
[2026-01-26 15:17:31] 2026-01-26 13:17:10,272 | INFO     | maximum number of monitored processes: 6
[2026-01-26 15:17:31] 2026-01-26 13:17:11,002 | INFO     | time since job start (5334s) is within the limit (349056.0s)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,018 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 15:17:31] 2026-01-26 13:17:11,048 | INFO     | job 6982691969 has state=finished
[2026-01-26 15:17:31] 2026-01-26 13:17:11,048 | INFO     | preparing for final server update for job 6982691969 in state='finished'
[2026-01-26 15:17:31] 2026-01-26 13:17:11,048 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/jobReport.json
[2026-01-26 15:17:31] 2026-01-26 13:17:11,050 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-26 15:17:31] 2026-01-26 13:17:11,050 | INFO     | this job has now completed (state=finished)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,050 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,050 | INFO     | log transfer has been attempted: DONE
[2026-01-26 15:17:31] 2026-01-26 13:17:11,050 | INFO     | job 6982691969 has finished - writing final server update
[2026-01-26 15:17:31] 2026-01-26 13:17:11,050 | INFO     | total number of processed events: 400 (read)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,052 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6982691969/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,053 | INFO     | extracted standard info from prmon json
[2026-01-26 15:17:31] 2026-01-26 13:17:11,053 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 15:17:31] 2026-01-26 13:17:11,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 15:17:31] 2026-01-26 13:17:11,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 15:17:31] 2026-01-26 13:17:11,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | fitting pss+swap vs Time
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | sum of square deviations: 164765880.0
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | sum of deviations: -8887664986.000002
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | mean x: 1769430859.0
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | mean y: 2422649.4197530863
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | intersect: 95447600320.19847
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | chi2: 0.13296533374365363
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | current memory leak: -53.94 B/s (using 81 data points, chi2=0.13)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | could have reported an average CPU frequency of 4188 MHz (6 samples)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | ..............................
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | . Timing measurements:
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | . get job = 0 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | . initial setup = 4 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | . payload setup = 2 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,054 | INFO     | . stage-in = 0 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,055 | INFO     | . payload execution = 5313 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,055 | INFO     | . stage-out = 0 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,055 | INFO     | . log creation = 0 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,055 | INFO     | ..............................
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | 
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | job summary report
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | --------------------------------------------------
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | PanDA job id: 6982691969
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | task id: 48329566
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | errors: (none)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,084 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | pilot state: finished 
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | transexitcode: 0
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | exeerrorcode: 0
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | exeerrordiag: 
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | exitcode: 0
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | exitmsg: OK
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | cpuconsumptiontime: 20301 s
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | nevents: 400
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | neventsw: 0
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | pid: 804470
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | pgrp: 804470
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | corecount: 4
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | event service: False
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | sizes: {0: 2284347, 10: 2284347, 5320: 2311063, 5321: 2320061, 5323: 2320339}
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | --------------------------------------------------
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | 
[2026-01-26 15:17:31] 2026-01-26 13:17:11,085 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-26 15:17:31] 2026-01-26 13:17:11,094 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,094 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,094 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | job 6982691969 has completed (purged errors)
[2026-01-26 15:17:31] 2026-01-26 13:17:11,095 | INFO     | overall cleanup function is called
[2026-01-26 15:17:31] 2026-01-26 13:17:12,102 | INFO     | --- collectZombieJob: --- 10, [804470]
[2026-01-26 15:17:31] 2026-01-26 13:17:12,102 | INFO     | zombie collector waiting for pid 804470
[2026-01-26 15:17:31] 2026-01-26 13:17:12,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 15:17:31] 2026-01-26 13:17:12,102 | INFO     | collected zombie processes
[2026-01-26 15:17:31] 2026-01-26 13:17:12,102 | INFO     | will attempt to kill all subprocesses of pid=804470
[2026-01-26 15:17:31] 2026-01-26 13:17:12,196 | INFO     | process IDs to be killed: [804470] (in reverse order)
[2026-01-26 15:17:31] 2026-01-26 13:17:12,229 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 15:17:31] 2026-01-26 13:17:12,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 15:17:31] 2026-01-26 13:17:12,232 | INFO     | did not find any defunct processes belonging to 804470
[2026-01-26 15:17:31] 2026-01-26 13:17:12,235 | INFO     | did not find any defunct processes belonging to 804470
[2026-01-26 15:17:31] 2026-01-26 13:17:12,235 | INFO     | ready for new job
[2026-01-26 15:17:31] 2026-01-26 13:17:12,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 15:17:31] 2026-01-26 13:17:12,236 | INFO     | **************************************
[2026-01-26 15:17:31] 2026-01-26 13:17:12,236 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 15:17:31] 2026-01-26 13:17:12,236 | INFO     | **************************************
[2026-01-26 15:17:31] 2026-01-26 13:17:12,236 | INFO     | 
[2026-01-26 15:17:31] 2026-01-26 13:17:12,237 | INFO     | architecture information:
[2026-01-26 15:17:31] 2026-01-26 13:17:12,237 | INFO     | executing command: cat /etc/os-release
[2026-01-26 15:17:31] 2026-01-26 13:17:12,244 | INFO     | cat /etc/os-release:
[2026-01-26 15:17:31] NAME="CentOS Linux"
[2026-01-26 15:17:31] VERSION="7 (Core)"
[2026-01-26 15:17:31] ID="centos"
[2026-01-26 15:17:31] ID_LIKE="rhel fedora"
[2026-01-26 15:17:31] VERSION_ID="7"
[2026-01-26 15:17:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 15:17:31] ANSI_COLOR="0;31"
[2026-01-26 15:17:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 15:17:31] HOME_URL="https://www.centos.org/"
[2026-01-26 15:17:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 15:17:31] 
[2026-01-26 15:17:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 15:17:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 15:17:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 15:17:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 15:17:31] 
[2026-01-26 15:17:31] 2026-01-26 13:17:12,244 | INFO     | **************************************
[2026-01-26 15:17:31] 2026-01-26 13:17:12,747 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-26 15:17:31] 2026-01-26 13:17:12,754 | INFO     | sufficient remaining disk space (68901928960 B)
[2026-01-26 15:17:31] 2026-01-26 13:17:12,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 15:17:31] 2026-01-26 13:17:12,754 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 15:17:31] 2026-01-26 13:17:12,754 | INFO     | update_server=False
[2026-01-26 15:17:31] 2026-01-26 13:17:12,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:17:31] 2026-01-26 13:17:12,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 15:17:31] 2026-01-26 13:17:12,775 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 15:17:31] 2026-01-26 13:17:12,775 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 15:17:31] 2026-01-26 13:17:12,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:17:31] 2026-01-26 13:17:12,775 | INFO     | will abort loop
[2026-01-26 15:17:31] 2026-01-26 13:17:13,238 | INFO     | all job control threads have been joined
[2026-01-26 15:17:31] 2026-01-26 13:17:13,539 | INFO     | all payload control threads have been joined
[2026-01-26 15:17:31] 2026-01-26 13:17:13,552 | INFO     | all data control threads have been joined
[2026-01-26 15:17:31] 2026-01-26 13:17:13,760 | INFO     | [job] retrieve thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:13,760 | INFO     | [job] queue monitor thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:13,780 | INFO     | [job] job monitor thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:13,889 | INFO     | [payload] validate_post thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,243 | INFO     | [job] control thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,321 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,339 | INFO     | [job] validate thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,391 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,403 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,545 | INFO     | [payload] control thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,546 | INFO     | [data] copytool_in thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,557 | INFO     | [data] control thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,760 | INFO     | [data] copytool_out thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:14,802 | INFO     | [payload] failed_post thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:15,052 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:16,761 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 15:17:31] 2026-01-26 13:17:26,004 | INFO     | [monitor] cgroup control has ended
[2026-01-26 15:17:31] 2026-01-26 13:17:26,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628851615552)>', '<ExcThread(monitor, started 140628218337024)>']
[2026-01-26 15:17:31] 2026-01-26 13:17:26,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 15:17:31] 2026-01-26 13:17:26,823 | INFO     | [monitor] control thread has ended
[2026-01-26 15:17:31] 2026-01-26 13:17:31,427 | INFO     | all workflow threads have been joined
[2026-01-26 15:17:31] 2026-01-26 13:17:31,427 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 15:17:31] 2026-01-26 13:17:31,427 | INFO     | traces error code: 0
[2026-01-26 15:17:31] 2026-01-26 13:17:31,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 15:17:31] 2026-01-26 13:17:31,521 [wrapper] ==== pilot stdout END ====
[2026-01-26 15:17:31] 2026-01-26 13:17:31,522 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 15:17:31] 2026-01-26 13:17:31,523 [wrapper] pilotpid: 799830
[2026-01-26 15:17:31] 2026-01-26 13:17:31,525 [wrapper] Pilot exit status: 0
[2026-01-26 15:17:31] 2026-01-26 13:17:31,531 [wrapper] pandaids: 6982691969
[2026-01-26 15:17:31] 2026-01-26 13:17:31,553 [wrapper] cleanup supervisor_pilot  858958 799831
[2026-01-26 15:17:31] 2026-01-26 13:17:31,555 [wrapper] Test setup, not cleaning
[2026-01-26 15:17:31] 2026-01-26 13:17:31,557 [wrapper] apfmon messages muted
[2026-01-26 15:17:31] 2026-01-26 13:17:31,558 [wrapper] ==== wrapper stdout END ====
[2026-01-26 15:17:31] 2026-01-26 13:17:31,560 [wrapper] ==== wrapper stderr END ====
[2026-01-26 15:17:31]  *** Error codes and diagnostics ***
[2026-01-26 15:17:31]     "exeErrorCode": 0,
[2026-01-26 15:17:31]     "exeErrorDiag": "",
[2026-01-26 15:17:31]     "pilotErrorCode": 0,
[2026-01-26 15:17:31]     "pilotErrorDiag": "",
[2026-01-26 15:17:31]  *** Listing of results directory ***
[2026-01-26 15:17:31] total 460580
[2026-01-26 15:17:31] -rw-r--r-- 1 ek ek    584422 Jan 25 08:30 pilot3.tar.gz
[2026-01-26 15:17:31] -rwx------ 1 ek ek     36322 Jan 25 08:31 runpilot2-wrapper.sh
[2026-01-26 15:17:31] -rw-r--r-- 1 ek ek      5111 Jan 25 08:35 queuedata.json
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek       100 Jan 26 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 15:17:31] -rwxr-xr-x 1 ek ek      7986 Jan 26 13:48 run_atlas
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek       105 Jan 26 13:48 job.xml
[2026-01-26 15:17:31] -rw-r--r-- 2 ek ek 276050128 Jan 26 13:48 EVNT.48329564._000001.pool.root.1
[2026-01-26 15:17:31] drwxrwx--x 2 ek ek      4096 Jan 26 13:48 shared
[2026-01-26 15:17:31] -rw-r--r-- 2 ek ek    597763 Jan 26 13:48 input.tar.gz
[2026-01-26 15:17:31] -rw-r--r-- 2 ek ek     15845 Jan 26 13:48 start_atlas.sh
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek         0 Jan 26 13:48 boinc_setup_complete
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek      9841 Jan 26 13:48 init_data.xml
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek         0 Jan 26 13:48 boinc_lockfile
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek      2600 Jan 26 13:48 pandaJob.out
[2026-01-26 15:17:31] -rw------- 1 ek ek        50 Jan 26 13:48 setup.sh.local
[2026-01-26 15:17:31] -rw------- 1 ek ek   1002189 Jan 26 13:48 agis_schedconf.cvmfs.json
[2026-01-26 15:17:31] -rw------- 1 ek ek   1516246 Jan 26 13:48 agis_ddmendpoints.agis.ALL.json
[2026-01-26 15:17:31] -rw------- 1 ek ek       432 Jan 26 13:48 workernode_map.json
[2026-01-26 15:17:31] drwx------ 5 ek ek      4096 Jan 26 13:48 pilot3
[2026-01-26 15:17:31] -rw------- 1 ek ek 189521120 Jan 26 15:16 HITS.48329566._000016.pool.root.1
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek       529 Jan 26 15:16 boinc_task_state.xml
[2026-01-26 15:17:31] -rw------- 1 ek ek        95 Jan 26 15:16 pilot_heartbeat.json
[2026-01-26 15:17:31] -rw------- 1 ek ek      1059 Jan 26 15:17 memory_monitor_summary.json
[2026-01-26 15:17:31] -rw------- 1 ek ek    283316 Jan 26 15:17 log.48329566._000016.job.log.tgz.1
[2026-01-26 15:17:31] -rw------- 1 ek ek      6374 Jan 26 15:17 heartbeat.json
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek        27 Jan 26 15:17 wrapper_checkpoint.txt
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek      8192 Jan 26 15:17 boinc_mmap_file
[2026-01-26 15:17:31] -rw------- 1 ek ek      4734 Jan 26 15:17 pilotlog.txt
[2026-01-26 15:17:31] -rw------- 1 ek ek    772225 Jan 26 15:17 log.48329566._000016.job.log.1
[2026-01-26 15:17:31] -rw------- 1 ek ek       357 Jan 26 15:17 output.list
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek       620 Jan 26 15:17 runtime_log
[2026-01-26 15:17:31] -rw------- 1 ek ek   1075200 Jan 26 15:17 result.tar.gz
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek      9501 Jan 26 15:17 runtime_log.err
[2026-01-26 15:17:31] -rw------- 1 ek ek       669 Jan 26 15:17 pBWKDmip838n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6T0KDmH2gGYm.diag
[2026-01-26 15:17:31] -rw-rw-r-- 1 ek ek     22236 Jan 26 15:17 stderr.txt
[2026-01-26 15:17:31] HITS file was successfully produced:
[2026-01-26 15:17:31] -rw------- 1 ek ek 189521120 Jan 26 15:16 shared/HITS.pool.root.1
[2026-01-26 15:17:31]  *** Contents of shared directory: ***
[2026-01-26 15:17:31] total 456324
[2026-01-26 15:17:31] -rw-r--r-- 2 ek ek 276050128 Jan 26 13:48 ATLAS.root_0
[2026-01-26 15:17:31] -rw-r--r-- 2 ek ek    597763 Jan 26 13:48 input.tar.gz
[2026-01-26 15:17:31] -rw-r--r-- 2 ek ek     15845 Jan 26 13:48 start_atlas.sh
[2026-01-26 15:17:31] -rw------- 1 ek ek 189521120 Jan 26 15:16 HITS.pool.root.1
[2026-01-26 15:17:31] -rw------- 1 ek ek   1075200 Jan 26 15:17 result.tar.gz
15:17:33 (795776): run_atlas exited; CPU time 20351.576213
15:17:33 (795776): called boinc_finish(0)

</stderr_txt>
]]>

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