Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:38 (20829): wrapper (7.7.26015): starting
23:14:38 (20829): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 23:14:38] Arguments: --nthreads 8
[2026-01-25 23:14:38] Threads: 8
[2026-01-25 23:14:38] Checking for CVMFS
[2026-01-25 23:14:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 23:14:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 23:14:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 23:14:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 23:14:41] 2.11.2.0 7934 59019 132548 155521 0 56 25160424 25165824 899 130560 0 21377663 99.855 13807469 4129 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 23:14:41] CVMFS is ok
[2026-01-25 23:14:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 23:14:42] Checking for apptainer binary...
[2026-01-25 23:14:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 23:14:42] Running /usr/bin/apptainer --version
[2026-01-25 23:14:42] apptainer version 1.3.2-1.el7
[2026-01-25 23:14:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 23:15:01] cg-vwn388.simple-grid.lan
[2026-01-25 23:15:01] apptainer works
[2026-01-25 23:15:02] Set ATHENA_PROC_NUMBER=8
[2026-01-25 23:15:02] Set ATHENA_CORE_NUMBER=8
[2026-01-25 23:15:02] Starting ATLAS job with PandaID=6982977236
[2026-01-25 23:15:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 04:17:02]  *** The last 200 lines of the pilot log: ***
[2026-01-26 04:17:02] 2026-01-26 03:16:10,439 | INFO     | job 6982977236 has finished - writing final server update
[2026-01-26 04:17:02] 2026-01-26 03:16:10,440 | INFO     | total number of processed events: 400 (read)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,442 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6982977236/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,443 | INFO     | extracted standard info from prmon json
[2026-01-26 04:17:02] 2026-01-26 03:16:10,443 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 04:17:02] 2026-01-26 03:16:10,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 04:17:02] 2026-01-26 03:16:10,443 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 04:17:02] 2026-01-26 03:16:10,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 04:17:02] 2026-01-26 03:16:10,450 | INFO     | fitting pss+swap vs Time
[2026-01-26 04:17:02] 2026-01-26 03:16:10,450 | INFO     | sum of square deviations: 7178069470.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,453 | INFO     | sum of deviations: 118509206802.00003
[2026-01-26 04:17:02] 2026-01-26 03:16:10,453 | INFO     | mean x: 1769388641.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,454 | INFO     | mean y: 2450150.1824561404
[2026-01-26 04:17:02] 2026-01-26 03:16:10,454 | INFO     | intersect: -29209978796.869625
[2026-01-26 04:17:02] 2026-01-26 03:16:10,454 | INFO     | chi2: 8.509474971664561
[2026-01-26 04:17:02] 2026-01-26 03:16:10,455 | INFO     | sum of square deviations: 6806862510.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,462 | INFO     | sum of deviations: 135532372461.49997
[2026-01-26 04:17:02] 2026-01-26 03:16:10,462 | INFO     | mean x: 1769388488.5
[2026-01-26 04:17:02] 2026-01-26 03:16:10,462 | INFO     | mean y: 2457031.8964285715
[2026-01-26 04:17:02] 2026-01-26 03:16:10,462 | INFO     | intersect: -35228079694.8506
[2026-01-26 04:17:02] 2026-01-26 03:16:10,463 | INFO     | chi2: 7.7911609542089
[2026-01-26 04:17:02] 2026-01-26 03:16:10,463 | INFO     | current chi2=7.7911609542089 (change=8.441343559356518 %)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,463 | INFO     | right removable region: 279
[2026-01-26 04:17:02] 2026-01-26 03:16:10,464 | INFO     | sum of square deviations: 6806862510.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,467 | INFO     | sum of deviations: 18535925917.999996
[2026-01-26 04:17:02] 2026-01-26 03:16:10,467 | INFO     | mean x: 1769388793.5
[2026-01-26 04:17:02] 2026-01-26 03:16:10,467 | INFO     | mean y: 2491198.8714285716
[2026-01-26 04:17:02] 2026-01-26 03:16:10,467 | INFO     | intersect: -4815772655.918169
[2026-01-26 04:17:02] 2026-01-26 03:16:10,468 | INFO     | chi2: 3.519428806934235
[2026-01-26 04:17:02] 2026-01-26 03:16:10,468 | INFO     | current chi2=3.519428806934235 (change=58.6410581304549 %)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,468 | INFO     | sum of square deviations: 6448679050.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,471 | INFO     | sum of deviations: -52787969672.000015
[2026-01-26 04:17:02] 2026-01-26 03:16:10,471 | INFO     | mean x: 1769388946.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,471 | INFO     | mean y: 2521516.6945454543
[2026-01-26 04:17:02] 2026-01-26 03:16:10,472 | INFO     | intersect: 14486487813.547241
[2026-01-26 04:17:02] 2026-01-26 03:16:10,472 | INFO     | chi2: 1.0797736131405125
[2026-01-26 04:17:02] 2026-01-26 03:16:10,472 | INFO     | current chi2=1.0797736131405125 (change=69.31963473694755 %)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,473 | INFO     | sum of square deviations: 6103286527.5
[2026-01-26 04:17:02] 2026-01-26 03:16:10,475 | INFO     | sum of deviations: -60877514470.5
[2026-01-26 04:17:02] 2026-01-26 03:16:10,475 | INFO     | mean x: 1769389098.5
[2026-01-26 04:17:02] 2026-01-26 03:16:10,476 | INFO     | mean y: 2525044.7444444443
[2026-01-26 04:17:02] 2026-01-26 03:16:10,476 | INFO     | intersect: 17651378652.146824
[2026-01-26 04:17:02] 2026-01-26 03:16:10,476 | INFO     | chi2: 0.9887273927994669
[2026-01-26 04:17:02] 2026-01-26 03:16:10,476 | INFO     | current chi2=0.9887273927994669 (change=8.431973075933799 %)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,476 | INFO     | left removable region: 30
[2026-01-26 04:17:02] 2026-01-26 03:16:10,477 | INFO     | sum of square deviations: 4787066500.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,479 | INFO     | sum of deviations: -15590784979.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,479 | INFO     | mean x: 1769389373.0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,479 | INFO     | mean y: 2520860.064257028
[2026-01-26 04:17:02] 2026-01-26 03:16:10,479 | INFO     | intersect: 5765166784.989391
[2026-01-26 04:17:02] 2026-01-26 03:16:10,480 | INFO     | chi2: 0.11375953964095652
[2026-01-26 04:17:02] 2026-01-26 03:16:10,480 | INFO     | current memory leak: -3.26 B/s (using 249 data points, chi2=0.11)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,481 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,485 | INFO     | ..............................
[2026-01-26 04:17:02] 2026-01-26 03:16:10,485 | INFO     | . Timing measurements:
[2026-01-26 04:17:02] 2026-01-26 03:16:10,485 | INFO     | . get job = 0 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | . initial setup = 119 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | . payload setup = 152 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | . stage-in = 0 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | . payload execution = 17514 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | . stage-out = 2 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | . log creation = 0 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,486 | INFO     | ..............................
[2026-01-26 04:17:02] 2026-01-26 03:16:10,641 | INFO     | 
[2026-01-26 04:17:02] 2026-01-26 03:16:10,641 | INFO     | job summary report
[2026-01-26 04:17:02] 2026-01-26 03:16:10,641 | INFO     | --------------------------------------------------
[2026-01-26 04:17:02] 2026-01-26 03:16:10,641 | INFO     | PanDA job id: 6982977236
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | task id: 48330013
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | errors: (none)
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | pilot state: finished 
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | transexitcode: 0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | exeerrorcode: 0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | exeerrordiag: 
[2026-01-26 04:17:02] 2026-01-26 03:16:10,642 | INFO     | exitcode: 0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | exitmsg: OK
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | cpuconsumptiontime: 66246 s
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | nevents: 400
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | neventsw: 0
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | pid: 29250
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | pgrp: 29250
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | corecount: 8
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | event service: False
[2026-01-26 04:17:02] 2026-01-26 03:16:10,643 | INFO     | sizes: {0: 2283265, 1: 2258382, 2: 2284412, 12: 2284412, 17671: 2316537, 17672: 2316536, 17675: 2325720, 17676: 2325776, 17677: 2325970}
[2026-01-26 04:17:02] 2026-01-26 03:16:10,644 | INFO     | --------------------------------------------------
[2026-01-26 04:17:02] 2026-01-26 03:16:10,644 | INFO     | 
[2026-01-26 04:17:02] 2026-01-26 03:16:10,644 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-26 04:17:02] 2026-01-26 03:16:11,047 | INFO     | time since job start (17690s) is within the limit (349056.0s)
[2026-01-26 04:17:02] 2026-01-26 03:16:11,205 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | job 6982977236 has completed (purged errors)
[2026-01-26 04:17:02] 2026-01-26 03:16:11,208 | INFO     | overall cleanup function is called
[2026-01-26 04:17:02] 2026-01-26 03:16:12,218 | INFO     | --- collectZombieJob: --- 10, [29250]
[2026-01-26 04:17:02] 2026-01-26 03:16:12,218 | INFO     | zombie collector waiting for pid 29250
[2026-01-26 04:17:02] 2026-01-26 03:16:12,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 04:17:02] 2026-01-26 03:16:12,218 | INFO     | collected zombie processes
[2026-01-26 04:17:02] 2026-01-26 03:16:12,218 | INFO     | will attempt to kill all subprocesses of pid=29250
[2026-01-26 04:17:02] 2026-01-26 03:16:12,312 | INFO     | process IDs to be killed: [29250] (in reverse order)
[2026-01-26 04:17:02] 2026-01-26 03:16:12,887 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 04:17:02] 2026-01-26 03:16:12,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 04:17:02] 2026-01-26 03:16:12,890 | INFO     | did not find any defunct processes belonging to 29250
[2026-01-26 04:17:02] 2026-01-26 03:16:12,891 | INFO     | did not find any defunct processes belonging to 29250
[2026-01-26 04:17:02] 2026-01-26 03:16:12,892 | INFO     | ready for new job
[2026-01-26 04:17:02] 2026-01-26 03:16:12,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 04:17:02] 2026-01-26 03:16:12,894 | INFO     | **************************************
[2026-01-26 04:17:02] 2026-01-26 03:16:12,894 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 04:17:02] 2026-01-26 03:16:12,894 | INFO     | **************************************
[2026-01-26 04:17:02] 2026-01-26 03:16:12,895 | INFO     | 
[2026-01-26 04:17:02] 2026-01-26 03:16:12,895 | INFO     | pilot is running in a VM
[2026-01-26 04:17:02] 2026-01-26 03:16:12,895 | INFO     | architecture information:
[2026-01-26 04:17:02] 2026-01-26 03:16:12,896 | INFO     | executing command: cat /etc/os-release
[2026-01-26 04:17:02] 2026-01-26 03:16:13,169 | INFO     | cat /etc/os-release:
[2026-01-26 04:17:02] NAME="CentOS Linux"
[2026-01-26 04:17:02] VERSION="7 (Core)"
[2026-01-26 04:17:02] ID="centos"
[2026-01-26 04:17:02] ID_LIKE="rhel fedora"
[2026-01-26 04:17:02] VERSION_ID="7"
[2026-01-26 04:17:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 04:17:02] ANSI_COLOR="0;31"
[2026-01-26 04:17:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 04:17:02] HOME_URL="https://www.centos.org/"
[2026-01-26 04:17:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 04:17:02] 
[2026-01-26 04:17:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 04:17:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 04:17:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 04:17:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 04:17:02] 
[2026-01-26 04:17:02] 2026-01-26 03:16:13,170 | INFO     | **************************************
[2026-01-26 04:17:02] 2026-01-26 03:16:13,672 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-26 04:17:02] 2026-01-26 03:16:13,876 | INFO     | sufficient remaining disk space (496207134720 B)
[2026-01-26 04:17:02] 2026-01-26 03:16:13,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 04:17:02] 2026-01-26 03:16:13,877 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 04:17:02] 2026-01-26 03:16:13,877 | INFO     | update_server=False
[2026-01-26 04:17:02] 2026-01-26 03:16:13,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 04:17:02] 2026-01-26 03:16:13,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 04:17:02] 2026-01-26 03:16:13,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 04:17:02] 2026-01-26 03:16:13,878 | INFO     | aborting loop
[2026-01-26 04:17:02] 2026-01-26 03:16:13,959 | INFO     | all job control threads have been joined
[2026-01-26 04:17:02] 2026-01-26 03:16:13,964 | INFO     | all data control threads have been joined
[2026-01-26 04:17:02] 2026-01-26 03:16:14,484 | INFO     | all payload control threads have been joined
[2026-01-26 04:17:02] 2026-01-26 03:16:14,883 | INFO     | [job] retrieve thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:14,884 | INFO     | [job] job monitor thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:14,929 | INFO     | [job] validate thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:14,965 | INFO     | [job] control thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:14,970 | INFO     | [data] control thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,452 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,496 | INFO     | [payload] control thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,530 | INFO     | [payload] validate_post thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,604 | INFO     | [data] copytool_in thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 04:17:02] 2026-01-26 03:16:15,646 | INFO     | [payload] failed_post thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 04:17:02] 2026-01-26 03:16:15,706 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:15,884 | INFO     | [data] copytool_out thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:16,277 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:16,666 | INFO     | [job] queue monitor thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:19,652 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 04:17:02] 2026-01-26 03:16:44,248 | INFO     | PID=24795 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 04:17:02] 2026-01-26 03:16:44,248 | INFO     | .. there are 2 such processes running
[2026-01-26 04:17:02] 2026-01-26 03:16:44,249 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 04:17:02] 2026-01-26 03:16:44,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 04:17:02] 2026-01-26 03:16:44,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 04:17:02] 2026-01-26 03:16:50,926 | INFO     | [monitor] cgroup control has ended
[2026-01-26 04:17:02] 2026-01-26 03:16:52,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845663942464)>', '<ExcThread(monitor, started 139845074679552)>']
[2026-01-26 04:17:02] 2026-01-26 03:16:53,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 04:17:02] 2026-01-26 03:16:53,307 | INFO     | [monitor] control thread has ended
[2026-01-26 04:17:02] 2026-01-26 03:16:57,533 | INFO     | all workflow threads have been joined
[2026-01-26 04:17:02] 2026-01-26 03:16:57,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 04:17:02] 2026-01-26 03:16:57,533 | INFO     | traces error code: 0
[2026-01-26 04:17:02] 2026-01-26 03:16:57,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 04:17:02] 2026-01-26 03:16:58,068 [wrapper] ==== pilot stdout END ====
[2026-01-26 04:17:02] 2026-01-26 03:16:58,111 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 04:17:02] 2026-01-26 03:16:58,193 [wrapper] pilotpid: 24795
[2026-01-26 04:17:02] 2026-01-26 03:16:58,234 [wrapper] Pilot exit status: 0
[2026-01-26 04:17:02] 2026-01-26 03:16:58,617 [wrapper] pandaids: 6982977236
[2026-01-26 04:17:02] 2026-01-26 03:16:59,977 [wrapper] cleanup supervisor_pilot  3348 24796
[2026-01-26 04:17:02] 2026-01-26 03:17:00,074 [wrapper] Test setup, not cleaning
[2026-01-26 04:17:02] 2026-01-26 03:17:00,186 [wrapper] apfmon messages muted
[2026-01-26 04:17:02] 2026-01-26 03:17:00,297 [wrapper] ==== wrapper stdout END ====
[2026-01-26 04:17:02] 2026-01-26 03:17:00,439 [wrapper] ==== wrapper stderr END ====
[2026-01-26 04:17:02]  *** Error codes and diagnostics ***
[2026-01-26 04:17:02]     "exeErrorCode": 0,
[2026-01-26 04:17:02]     "exeErrorDiag": "",
[2026-01-26 04:17:02]     "pilotErrorCode": 0,
[2026-01-26 04:17:02]     "pilotErrorDiag": "",
[2026-01-26 04:17:02]  *** Listing of results directory ***
[2026-01-26 04:17:02] total 413176
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc      5111 Jan 25 12:28 queuedata.json
[2026-01-26 04:17:02] -rwx------. 1 boinc boinc     36322 Jan 25 12:28 runpilot2-wrapper.sh
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc    584422 Jan 25 12:29 pilot3.tar.gz
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc       100 Jan 25 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 04:17:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 23:14 run_atlas
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc       105 Jan 25 23:14 job.xml
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc      6391 Jan 25 23:14 init_data.xml
[2026-01-26 04:17:02] -rw-r--r--. 2 boinc boinc 248981289 Jan 25 23:14 EVNT.48330011._000002.pool.root.1
[2026-01-26 04:17:02] -rw-r--r--. 2 boinc boinc     15845 Jan 25 23:14 start_atlas.sh
[2026-01-26 04:17:02] drwxrwx--x. 2 boinc boinc        68 Jan 25 23:14 shared
[2026-01-26 04:17:02] -rw-r--r--. 2 boinc boinc    597763 Jan 25 23:14 input.tar.gz
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc         0 Jan 25 23:14 boinc_lockfile
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc      2608 Jan 25 23:15 pandaJob.out
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc       415 Jan 25 23:21 workernode_map.json
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc   1004254 Jan 25 23:21 agis_schedconf.cvmfs.json
[2026-01-26 04:17:02] drwx------. 5 boinc boinc      4096 Jan 25 23:21 pilot3
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc 164239950 Jan 26 04:14 HITS.48330013._000027.pool.root.1
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc       531 Jan 26 04:14 boinc_task_state.xml
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc      1015 Jan 26 04:16 memory_monitor_summary.json
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc   1516246 Jan 26 04:16 agis_ddmendpoints.agis.ALL.json
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc    495208 Jan 26 04:16 log.48330013._000027.job.log.tgz.1
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc      6308 Jan 26 04:16 heartbeat.json
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc      8192 Jan 26 04:16 boinc_mmap_file
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc        28 Jan 26 04:16 wrapper_checkpoint.txt
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc        95 Jan 26 04:16 pilot_heartbeat.json
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc      4881 Jan 26 04:16 pilotlog.txt
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc   2479655 Jan 26 04:17 log.48330013._000027.job.log.1
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc       357 Jan 26 04:17 output.list
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc       620 Jan 26 04:17 runtime_log
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc   2990080 Jan 26 04:17 result.tar.gz
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc      8832 Jan 26 04:17 runtime_log.err
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc       656 Jan 26 04:17 mWTMDmYTD48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqU7KDmFAtz5n.diag
[2026-01-26 04:17:02] -rw-r--r--. 1 boinc boinc     20746 Jan 26 04:17 stderr.txt
[2026-01-26 04:17:02] HITS file was successfully produced:
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc 164239950 Jan 26 04:14 shared/HITS.pool.root.1
[2026-01-26 04:17:02]  *** Contents of shared directory: ***
[2026-01-26 04:17:02] total 407060
[2026-01-26 04:17:02] -rw-r--r--. 2 boinc boinc 248981289 Jan 25 23:14 ATLAS.root_0
[2026-01-26 04:17:02] -rw-r--r--. 2 boinc boinc     15845 Jan 25 23:14 start_atlas.sh
[2026-01-26 04:17:02] -rw-r--r--. 2 boinc boinc    597763 Jan 25 23:14 input.tar.gz
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc 164239950 Jan 26 04:14 HITS.pool.root.1
[2026-01-26 04:17:02] -rw-------. 1 boinc boinc   2990080 Jan 26 04:17 result.tar.gz
04:17:04 (20829): run_atlas exited; CPU time 66424.174683
04:17:04 (20829): called boinc_finish(0)

</stderr_txt>
]]>

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