Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:14:17 (662): wrapper (7.7.26015): starting
11:14:17 (662): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 11:14:17] Arguments: --nthreads 8
[2026-01-25 11:14:17] Threads: 8
[2026-01-25 11:14:17] Checking for CVMFS
[2026-01-25 11:14:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 11:14:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 11:14:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 11:14:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 11:14:17] 2.11.2.0 2822 159925 85104 155513 0 52 10203555 20275200 1 130560 0 41549075 99.834 10426960 27337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-25 11:14:17] CVMFS is ok
[2026-01-25 11:14:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 11:14:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 11:14:17] Further information can be found at the LHC@home message board.
[2026-01-25 11:14:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 11:14:17] Checking for apptainer binary...
[2026-01-25 11:14:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 11:14:17] Running /usr/bin/apptainer --version
[2026-01-25 11:14:17] apptainer version 1.3.2-1.el7
[2026-01-25 11:14:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 11:14:19] c-204-37.aglt2.org
[2026-01-25 11:14:19] apptainer works
[2026-01-25 11:14:19] Set ATHENA_PROC_NUMBER=8
[2026-01-25 11:14:19] Set ATHENA_CORE_NUMBER=8
[2026-01-25 11:14:19] Starting ATLAS job with PandaID=6982979056
[2026-01-25 11:14:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 13:17:07]  *** The last 200 lines of the pilot log: ***
[2026-01-25 13:17:07] 2026-01-25 18:16:08,331 | INFO     | extracted standard info from prmon json
[2026-01-25 13:17:07] 2026-01-25 18:16:08,331 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 13:17:07] 2026-01-25 18:16:08,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 13:17:07] 2026-01-25 18:16:08,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 13:17:07] 2026-01-25 18:16:08,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 13:17:07] 2026-01-25 18:16:08,334 | INFO     | fitting pss+swap vs Time
[2026-01-25 13:17:07] 2026-01-25 18:16:08,334 | INFO     | sum of square deviations: 522502820.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,335 | INFO     | sum of deviations: -4807934783.000001
[2026-01-25 13:17:07] 2026-01-25 18:16:08,335 | INFO     | mean x: 1769361319.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,335 | INFO     | mean y: 2583506.4453781513
[2026-01-25 13:17:07] 2026-01-25 18:16:08,335 | INFO     | intersect: 16283785260.179186
[2026-01-25 13:17:07] 2026-01-25 18:16:08,335 | INFO     | chi2: 1.7368141966651296
[2026-01-25 13:17:07] 2026-01-25 18:16:08,336 | INFO     | sum of square deviations: 459366752.5
[2026-01-25 13:17:07] 2026-01-25 18:16:08,336 | INFO     | sum of deviations: -3396023079.4999976
[2026-01-25 13:17:07] 2026-01-25 18:16:08,336 | INFO     | mean x: 1769361166.5
[2026-01-25 13:17:07] 2026-01-25 18:16:08,336 | INFO     | mean y: 2586915.00877193
[2026-01-25 13:17:07] 2026-01-25 18:16:08,337 | INFO     | intersect: 13083183899.234438
[2026-01-25 13:17:07] 2026-01-25 18:16:08,337 | INFO     | chi2: 1.7395640394019063
[2026-01-25 13:17:07] 2026-01-25 18:16:08,337 | INFO     | current chi2=1.7395640394019063 (change=-0.15832682287240005 %)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,337 | INFO     | right removable region: 113
[2026-01-25 13:17:07] 2026-01-25 18:16:08,337 | INFO     | sum of square deviations: 459366752.5
[2026-01-25 13:17:07] 2026-01-25 18:16:08,338 | INFO     | sum of deviations: -24047459040.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,338 | INFO     | mean x: 1769361471.5
[2026-01-25 13:17:07] 2026-01-25 18:16:08,338 | INFO     | mean y: 2629127.298245614
[2026-01-25 13:17:07] 2026-01-25 18:16:08,338 | INFO     | intersect: 92627198235.29085
[2026-01-25 13:17:07] 2026-01-25 18:16:08,338 | INFO     | chi2: 0.13911251851553674
[2026-01-25 13:17:07] 2026-01-25 18:16:08,339 | INFO     | current chi2=0.13911251851553674 (change=91.9903626546439 %)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,339 | INFO     | sum of square deviations: 401533110.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,339 | INFO     | sum of deviations: -24596911659.999996
[2026-01-25 13:17:07] 2026-01-25 18:16:08,339 | INFO     | mean x: 1769361624.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,340 | INFO     | mean y: 2630430.788990826
[2026-01-25 13:17:07] 2026-01-25 18:16:08,340 | INFO     | intersect: 108389287660.92906
[2026-01-25 13:17:07] 2026-01-25 18:16:08,340 | INFO     | chi2: 0.09347611145495141
[2026-01-25 13:17:07] 2026-01-25 18:16:08,340 | INFO     | current chi2=0.09347611145495141 (change=32.8053920291066 %)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,340 | INFO     | sum of square deviations: 348769330.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,341 | INFO     | sum of deviations: -22536556871.999996
[2026-01-25 13:17:07] 2026-01-25 18:16:08,341 | INFO     | mean x: 1769361776.5
[2026-01-25 13:17:07] 2026-01-25 18:16:08,341 | INFO     | mean y: 2624462.5384615385
[2026-01-25 13:17:07] 2026-01-25 18:16:08,341 | INFO     | intersect: 114334129194.43445
[2026-01-25 13:17:07] 2026-01-25 18:16:08,341 | INFO     | chi2: 0.08968418141604538
[2026-01-25 13:17:07] 2026-01-25 18:16:08,342 | INFO     | current chi2=0.08968418141604538 (change=4.056576573292162 %)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,342 | INFO     | left removable region: 30
[2026-01-25 13:17:07] 2026-01-25 18:16:08,342 | INFO     | sum of square deviations: 177275882.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,342 | INFO     | sum of deviations: -13760375364.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,343 | INFO     | mean x: 1769362051.0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,343 | INFO     | mean y: 2605287.1807228914
[2026-01-25 13:17:07] 2026-01-25 18:16:08,343 | INFO     | intersect: 137342697475.11249
[2026-01-25 13:17:07] 2026-01-25 18:16:08,343 | INFO     | chi2: 0.0787691319534406
[2026-01-25 13:17:07] 2026-01-25 18:16:08,343 | INFO     | current memory leak: -77.62 B/s (using 83 data points, chi2=0.08)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,344 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,344 | INFO     | ..............................
[2026-01-25 13:17:07] 2026-01-25 18:16:08,344 | INFO     | . Timing measurements:
[2026-01-25 13:17:07] 2026-01-25 18:16:08,344 | INFO     | . get job = 0 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,344 | INFO     | . initial setup = 11 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,344 | INFO     | . payload setup = 11 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,345 | INFO     | . stage-in = 0 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,345 | INFO     | . payload execution = 7247 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,345 | INFO     | . stage-out = 0 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,345 | INFO     | . log creation = 0 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,345 | INFO     | ..............................
[2026-01-25 13:17:07] 2026-01-25 18:16:08,428 | INFO     | 
[2026-01-25 13:17:07] 2026-01-25 18:16:08,428 | INFO     | job summary report
[2026-01-25 13:17:07] 2026-01-25 18:16:08,428 | INFO     | --------------------------------------------------
[2026-01-25 13:17:07] 2026-01-25 18:16:08,428 | INFO     | PanDA job id: 6982979056
[2026-01-25 13:17:07] 2026-01-25 18:16:08,428 | INFO     | task id: 48310724
[2026-01-25 13:17:07] 2026-01-25 18:16:08,428 | INFO     | errors: (none)
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | pilot state: finished 
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | transexitcode: 0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | exeerrorcode: 0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | exeerrordiag: 
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | exitcode: 0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | exitmsg: OK
[2026-01-25 13:17:07] 2026-01-25 18:16:08,429 | INFO     | cpuconsumptiontime: 53852 s
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | nevents: 400
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | neventsw: 0
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | pid: 9147
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | pgrp: 9147
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | corecount: 8
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | event service: False
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | sizes: {0: 2283812, 1: 2284273, 12: 2284273, 7262: 2311517, 7263: 2320515, 7266: 2320571, 7268: 2320893}
[2026-01-25 13:17:07] 2026-01-25 18:16:08,430 | INFO     | --------------------------------------------------
[2026-01-25 13:17:07] 2026-01-25 18:16:08,431 | INFO     | 
[2026-01-25 13:17:07] 2026-01-25 18:16:08,431 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-25 13:17:07] 2026-01-25 18:16:09,137 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,138 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,138 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,141 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 13:17:07] 2026-01-25 18:16:09,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,141 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 13:17:07] 2026-01-25 18:16:09,141 | INFO     | job 6982979056 has completed (purged errors)
[2026-01-25 13:17:07] 2026-01-25 18:16:09,142 | INFO     | overall cleanup function is called
[2026-01-25 13:17:07] 2026-01-25 18:16:09,738 | WARNING  | process 9147 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 13:17:07] 2026-01-25 18:16:09,806 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 13:17:07] 2026-01-25 18:16:09,887 | INFO     | number of running child processes to parent process 9147: 1
[2026-01-25 13:17:07] 2026-01-25 18:16:09,887 | INFO     | maximum number of monitored processes: 6
[2026-01-25 13:17:07] 2026-01-25 18:16:09,887 | INFO     | aborting job monitoring since job object (job id=6982979056) has expired
[2026-01-25 13:17:07] 2026-01-25 18:16:10,149 | INFO     | --- collectZombieJob: --- 10, [9147]
[2026-01-25 13:17:07] 2026-01-25 18:16:10,149 | INFO     | zombie collector waiting for pid 9147
[2026-01-25 13:17:07] 2026-01-25 18:16:10,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 13:17:07] 2026-01-25 18:16:10,149 | INFO     | collected zombie processes
[2026-01-25 13:17:07] 2026-01-25 18:16:10,150 | INFO     | will attempt to kill all subprocesses of pid=9147
[2026-01-25 13:17:07] 2026-01-25 18:16:10,232 | INFO     | process IDs to be killed: [9147] (in reverse order)
[2026-01-25 13:17:07] 2026-01-25 18:16:10,292 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 13:17:07] 2026-01-25 18:16:10,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 13:17:07] 2026-01-25 18:16:10,296 | INFO     | did not find any defunct processes belonging to 9147
[2026-01-25 13:17:07] 2026-01-25 18:16:10,300 | INFO     | did not find any defunct processes belonging to 9147
[2026-01-25 13:17:07] 2026-01-25 18:16:10,300 | INFO     | ready for new job
[2026-01-25 13:17:07] 2026-01-25 18:16:10,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 13:17:07] 2026-01-25 18:16:10,302 | INFO     | **************************************
[2026-01-25 13:17:07] 2026-01-25 18:16:10,302 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 13:17:07] 2026-01-25 18:16:10,302 | INFO     | **************************************
[2026-01-25 13:17:07] 2026-01-25 18:16:10,302 | INFO     | 
[2026-01-25 13:17:07] 2026-01-25 18:16:10,303 | INFO     | architecture information:
[2026-01-25 13:17:07] 2026-01-25 18:16:10,304 | INFO     | executing command: cat /etc/os-release
[2026-01-25 13:17:07] 2026-01-25 18:16:10,322 | INFO     | cat /etc/os-release:
[2026-01-25 13:17:07] NAME="CentOS Linux"
[2026-01-25 13:17:07] VERSION="7 (Core)"
[2026-01-25 13:17:07] ID="centos"
[2026-01-25 13:17:07] ID_LIKE="rhel fedora"
[2026-01-25 13:17:07] VERSION_ID="7"
[2026-01-25 13:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 13:17:07] ANSI_COLOR="0;31"
[2026-01-25 13:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 13:17:07] HOME_URL="https://www.centos.org/"
[2026-01-25 13:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 13:17:07] 
[2026-01-25 13:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 13:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 13:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 13:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 13:17:07] 
[2026-01-25 13:17:07] 2026-01-25 18:16:10,323 | INFO     | **************************************
[2026-01-25 13:17:07] 2026-01-25 18:16:10,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-25 13:17:07] 2026-01-25 18:16:10,844 | INFO     | sufficient remaining disk space (17984126976 B)
[2026-01-25 13:17:07] 2026-01-25 18:16:10,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 13:17:07] 2026-01-25 18:16:10,845 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 13:17:07] 2026-01-25 18:16:10,845 | INFO     | update_server=False
[2026-01-25 13:17:07] 2026-01-25 18:16:10,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 13:17:07] 2026-01-25 18:16:10,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 13:17:07] 2026-01-25 18:16:10,846 | INFO     | will abort loop
[2026-01-25 13:17:07] 2026-01-25 18:16:11,021 | INFO     | all data control threads have been joined
[2026-01-25 13:17:07] 2026-01-25 18:16:11,036 | INFO     | all payload control threads have been joined
[2026-01-25 13:17:07] 2026-01-25 18:16:11,753 | INFO     | all job control threads have been joined
[2026-01-25 13:17:07] 2026-01-25 18:16:11,848 | INFO     | [job] retrieve thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:11,849 | INFO     | [job] job monitor thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:11,851 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:11,852 | INFO     | [job] validate thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:11,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 13:17:07] 2026-01-25 18:16:12,012 | INFO     | [payload] validate_post thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:12,026 | INFO     | [data] control thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:12,042 | INFO     | [payload] control thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:12,353 | INFO     | [payload] failed_post thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:12,354 | INFO     | [data] copytool_in thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:12,758 | INFO     | [job] control thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:12,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 13:17:07] 2026-01-25 18:16:12,985 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:13,327 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:13,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 13:17:07] 2026-01-25 18:16:13,992 | INFO     | [data] copytool_out thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:14,444 | INFO     | [job] queue monitor thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:16,841 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:21,162 | INFO     | job.realtimelogging is not enabled
[2026-01-25 13:17:07] 2026-01-25 18:16:22,168 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 13:17:07] 2026-01-25 18:16:40,788 | INFO     | PID=4446 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-25 13:17:07] 2026-01-25 18:16:40,788 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 13:17:07] 2026-01-25 18:16:40,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 13:17:07] 2026-01-25 18:16:40,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 13:17:07] 2026-01-25 18:17:00,141 | INFO     | [monitor] cgroup control has ended
[2026-01-25 13:17:07] 2026-01-25 18:17:01,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478191302464)>', '<ExcThread(monitor, started 140477231785728)>']
[2026-01-25 13:17:07] 2026-01-25 18:17:01,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 13:17:07] 2026-01-25 18:17:01,873 | INFO     | [monitor] control thread has ended
[2026-01-25 13:17:07] 2026-01-25 18:17:06,892 | INFO     | all workflow threads have been joined
[2026-01-25 13:17:07] 2026-01-25 18:17:06,892 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 13:17:07] 2026-01-25 18:17:06,893 | INFO     | traces error code: 0
[2026-01-25 13:17:07] 2026-01-25 18:17:06,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 13:17:07] 2026-01-25 18:17:07,011 [wrapper] ==== pilot stdout END ====
[2026-01-25 13:17:07] 2026-01-25 18:17:07,015 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 13:17:07] 2026-01-25 18:17:07,020 [wrapper] pilotpid: 4446
[2026-01-25 13:17:07] 2026-01-25 18:17:07,024 [wrapper] Pilot exit status: 0
[2026-01-25 13:17:07] 2026-01-25 18:17:07,044 [wrapper] pandaids: 6982979056
[2026-01-25 13:17:07] 2026-01-25 18:17:07,096 [wrapper] cleanup supervisor_pilot 25491 4447
[2026-01-25 13:17:07] 2026-01-25 18:17:07,101 [wrapper] Test setup, not cleaning
[2026-01-25 13:17:07] 2026-01-25 18:17:07,106 [wrapper] apfmon messages muted
[2026-01-25 13:17:07] 2026-01-25 18:17:07,111 [wrapper] ==== wrapper stdout END ====
[2026-01-25 13:17:07] 2026-01-25 18:17:07,116 [wrapper] ==== wrapper stderr END ====
[2026-01-25 13:17:07]  *** Error codes and diagnostics ***
[2026-01-25 13:17:07]     "exeErrorCode": 0,
[2026-01-25 13:17:07]     "exeErrorDiag": "",
[2026-01-25 13:17:07]     "pilotErrorCode": 0,
[2026-01-25 13:17:07]     "pilotErrorDiag": "",
[2026-01-25 13:17:07]  *** Listing of results directory ***
[2026-01-25 13:17:07] total 672036
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 06:28 queuedata.json
[2026-01-25 13:17:07] -rwx------ 1 boincer umatlas     36322 Jan 25 06:28 runpilot2-wrapper.sh
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 06:29 pilot3.tar.gz
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas       100 Jan 25 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 13:17:07] -rwxr-xr-x 1 boincer umatlas      7986 Jan 25 11:14 run_atlas
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas       105 Jan 25 11:14 job.xml
[2026-01-25 13:17:07] -rw-r--r-- 2 boincer umatlas 501811815 Jan 25 11:14 EVNT.48310721._000177.pool.root.1
[2026-01-25 13:17:07] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 11:14 start_atlas.sh
[2026-01-25 13:17:07] drwxrwx--x 2 boincer umatlas      4096 Jan 25 11:14 shared
[2026-01-25 13:17:07] -rw-r--r-- 2 boincer umatlas    597756 Jan 25 11:14 input.tar.gz
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas         0 Jan 25 11:14 boinc_lockfile
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas      2530 Jan 25 11:14 pandaJob.out
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas        57 Jan 25 11:14 setup.sh.local
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas   1004238 Jan 25 11:14 agis_schedconf.cvmfs.json
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas   1516246 Jan 25 11:14 agis_ddmendpoints.agis.ALL.json
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas       433 Jan 25 11:14 workernode_map.json
[2026-01-25 13:17:07] drwx------ 5 boincer umatlas      4096 Jan 25 11:14 pilot3
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas      5909 Jan 25 13:12 init_data.xml
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas       530 Jan 25 13:15 boinc_task_state.xml
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas 179685590 Jan 25 13:15 HITS.48310724._008803.pool.root.1
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas        95 Jan 25 13:15 pilot_heartbeat.json
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas      1049 Jan 25 13:15 memory_monitor_summary.json
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas    349178 Jan 25 13:16 log.48310724._008803.job.log.tgz.1
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas      6405 Jan 25 13:16 heartbeat.json
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas      8192 Jan 25 13:17 boinc_mmap_file
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas        27 Jan 25 13:17 wrapper_checkpoint.txt
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas      4815 Jan 25 13:17 pilotlog.txt
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas   1010955 Jan 25 13:17 log.48310724._008803.job.log.1
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas       357 Jan 25 13:17 output.list
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas       620 Jan 25 13:17 runtime_log
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas   1382400 Jan 25 13:17 result.tar.gz
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas      9341 Jan 25 13:17 runtime_log.err
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas       658 Jan 25 13:17 AGuNDmNTD48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUT7KDmbuGkKo.diag
[2026-01-25 13:17:07] -rw-r--r-- 1 boincer umatlas     21028 Jan 25 13:17 stderr.txt
[2026-01-25 13:17:07] HITS file was successfully produced:
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas 179685590 Jan 25 13:15 shared/HITS.pool.root.1
[2026-01-25 13:17:07]  *** Contents of shared directory: ***
[2026-01-25 13:17:07] total 667484
[2026-01-25 13:17:07] -rw-r--r-- 2 boincer umatlas 501811815 Jan 25 11:14 ATLAS.root_0
[2026-01-25 13:17:07] -rw-r--r-- 2 boincer umatlas     15845 Jan 25 11:14 start_atlas.sh
[2026-01-25 13:17:07] -rw-r--r-- 2 boincer umatlas    597756 Jan 25 11:14 input.tar.gz
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas 179685590 Jan 25 13:15 HITS.pool.root.1
[2026-01-25 13:17:07] -rw------- 1 boincer umatlas   1382400 Jan 25 13:17 result.tar.gz
13:17:09 (662): run_atlas exited; CPU time 53790.728259
13:17:09 (662): called boinc_finish(0)

</stderr_txt>
]]>

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