Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:42:02 (572693): wrapper (7.7.26015): starting
14:42:02 (572693): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 14:42:02] Arguments: --nthreads 4
[2026-01-27 14:42:02] Threads: 4
[2026-01-27 14:42:02] Checking for CVMFS
[2026-01-27 14:42:02] No cvmfs_config command found, will try listing directly
[2026-01-27 14:42:02] CVMFS is ok
[2026-01-27 14:42:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 14:42:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 14:42:02] Further information can be found at the LHC@home message board.
[2026-01-27 14:42:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 14:42:02] Checking for apptainer binary...
[2026-01-27 14:42:02] which: no apptainer in ((null))
[2026-01-27 14:42:02] apptainer is not installed, using version from CVMFS
[2026-01-27 14:42:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 14:42:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-01-27 14:42:02] apptainer works
[2026-01-27 14:42:02] Set ATHENA_PROC_NUMBER=4
[2026-01-27 14:42:02] Set ATHENA_CORE_NUMBER=4
[2026-01-27 14:42:02] Starting ATLAS job with PandaID=6982919488
[2026-01-27 14:42:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 17:51:04]  *** The last 200 lines of the pilot log: ***
[2026-01-27 17:51:04] 2026-01-27 16:44:12,476 | INFO     | log transfer has been attempted: DONE
[2026-01-27 17:51:04] 2026-01-27 16:44:12,476 | INFO     | job 6982919488 has finished - writing final server update
[2026-01-27 17:51:04] 2026-01-27 16:44:12,477 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2057748/.job.ad'
[2026-01-27 17:51:04] 2026-01-27 16:44:12,477 | INFO     | total number of processed events: 400 (read)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,496 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6982919488/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,497 | INFO     | extracted standard info from prmon json
[2026-01-27 17:51:04] 2026-01-27 16:44:12,497 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 17:51:04] 2026-01-27 16:44:12,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 17:51:04] 2026-01-27 16:44:12,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 17:51:04] 2026-01-27 16:44:12,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 17:51:04] 2026-01-27 16:44:12,504 | INFO     | fitting pss+swap vs Time
[2026-01-27 17:51:04] 2026-01-27 16:44:12,505 | INFO     | sum of square deviations: 1778377530.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,507 | INFO     | sum of deviations: -37073030721.999985
[2026-01-27 17:51:04] 2026-01-27 16:44:12,507 | INFO     | mean x: 1769526796.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,507 | INFO     | mean y: 2359219.251396648
[2026-01-27 17:51:04] 2026-01-27 16:44:12,507 | INFO     | intersect: 36890882699.13938
[2026-01-27 17:51:04] 2026-01-27 16:44:12,508 | INFO     | chi2: 2.2888745240200383
[2026-01-27 17:51:04] 2026-01-27 16:44:12,508 | INFO     | sum of square deviations: 1633472487.5
[2026-01-27 17:51:04] 2026-01-27 16:44:12,510 | INFO     | sum of deviations: -25639679637.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,510 | INFO     | mean x: 1769526643.5
[2026-01-27 17:51:04] 2026-01-27 16:44:12,510 | INFO     | mean y: 2371008.7011494255
[2026-01-27 17:51:04] 2026-01-27 16:44:12,510 | INFO     | intersect: 27777614605.190502
[2026-01-27 17:51:04] 2026-01-27 16:44:12,511 | INFO     | chi2: 1.6297288499485407
[2026-01-27 17:51:04] 2026-01-27 16:44:12,511 | INFO     | current chi2=1.6297288499485407 (change=28.797807269653852 %)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,512 | INFO     | sum of square deviations: 1496660620.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,514 | INFO     | sum of deviations: -24621025265.000004
[2026-01-27 17:51:04] 2026-01-27 16:44:12,514 | INFO     | mean x: 1769526491.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,514 | INFO     | mean y: 2372145.00591716
[2026-01-27 17:51:04] 2026-01-27 16:44:12,514 | INFO     | intersect: 29112215659.160652
[2026-01-27 17:51:04] 2026-01-27 16:44:12,515 | INFO     | chi2: 1.6248191179751086
[2026-01-27 17:51:04] 2026-01-27 16:44:12,515 | INFO     | current chi2=1.6248191179751086 (change=0.3012606651460559 %)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,515 | INFO     | right removable region: 168
[2026-01-27 17:51:04] 2026-01-27 16:44:12,515 | INFO     | sum of square deviations: 1633472487.5
[2026-01-27 17:51:04] 2026-01-27 16:44:12,517 | INFO     | sum of deviations: -56012684713.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,517 | INFO     | mean x: 1769526948.5
[2026-01-27 17:51:04] 2026-01-27 16:44:12,517 | INFO     | mean y: 2378768.0804597703
[2026-01-27 17:51:04] 2026-01-27 16:44:12,517 | INFO     | intersect: 60680447003.67264
[2026-01-27 17:51:04] 2026-01-27 16:44:12,518 | INFO     | chi2: 1.0259727624403565
[2026-01-27 17:51:04] 2026-01-27 16:44:12,518 | INFO     | current chi2=1.0259727624403565 (change=55.17566595837674 %)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,518 | INFO     | sum of square deviations: 1496660620.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,520 | INFO     | sum of deviations: -48508280493.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,520 | INFO     | mean x: 1769527101.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,520 | INFO     | mean y: 2370379.6863905326
[2026-01-27 17:51:04] 2026-01-27 16:44:12,520 | INFO     | intersect: 57354528783.68926
[2026-01-27 17:51:04] 2026-01-27 16:44:12,521 | INFO     | chi2: 1.010315658415724
[2026-01-27 17:51:04] 2026-01-27 16:44:12,521 | INFO     | current chi2=1.010315658415724 (change=1.526074043855789 %)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,521 | INFO     | left removable region: 20
[2026-01-27 17:51:04] 2026-01-27 16:44:12,522 | INFO     | sum of square deviations: 1005179777.0
[2026-01-27 17:51:04] 2026-01-27 16:44:12,523 | INFO     | sum of deviations: -19741952190.5
[2026-01-27 17:51:04] 2026-01-27 16:44:12,523 | INFO     | mean x: 1769527070.5
[2026-01-27 17:51:04] 2026-01-27 16:44:12,523 | INFO     | mean y: 2362495.439189189
[2026-01-27 17:51:04] 2026-01-27 16:44:12,523 | INFO     | intersect: 34756263862.08648
[2026-01-27 17:51:04] 2026-01-27 16:44:12,524 | INFO     | chi2: 0.23906960797397891
[2026-01-27 17:51:04] 2026-01-27 16:44:12,524 | INFO     | current memory leak: -19.64 B/s (using 148 data points, chi2=0.24)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | could have reported an average CPU frequency of 2478 MHz (10 samples)
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | ..............................
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | . Timing measurements:
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | . get job = 0 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | . initial setup = 6 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | . payload setup = 7 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,525 | INFO     | . stage-in = 0 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,526 | INFO     | . payload execution = 10882 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,526 | INFO     | . stage-out = 1 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,526 | INFO     | . log creation = 0 s
[2026-01-27 17:51:04] 2026-01-27 16:44:12,526 | INFO     | ..............................
[2026-01-27 17:51:04] 2026-01-27 16:44:13,117 | INFO     | 
[2026-01-27 17:51:04] 2026-01-27 16:44:13,118 | INFO     | job summary report
[2026-01-27 17:51:04] 2026-01-27 16:44:13,118 | INFO     | --------------------------------------------------
[2026-01-27 17:51:04] 2026-01-27 16:44:13,118 | INFO     | PanDA job id: 6982919488
[2026-01-27 17:51:04] 2026-01-27 16:44:13,118 | INFO     | task id: 48310724
[2026-01-27 17:51:04] 2026-01-27 16:44:13,118 | INFO     | errors: (none)
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | pilot state: finished 
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | transexitcode: 0
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | exeerrorcode: 0
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | exeerrordiag: 
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | exitcode: 0
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | exitmsg: OK
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | cpuconsumptiontime: 41801 s
[2026-01-27 17:51:04] 2026-01-27 16:44:13,119 | INFO     | nevents: 400
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | neventsw: 0
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | pid: 582006
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | pgrp: 582006
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | corecount: 4
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | event service: False
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | sizes: {0: 2284262, 11: 2284262, 10893: 2313397, 10895: 2322417, 10898: 2322473, 10899: 2322667}
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | --------------------------------------------------
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | 
[2026-01-27 17:51:04] 2026-01-27 16:44:13,120 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-27 17:51:04] 2026-01-27 16:44:13,146 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,146 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,149 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 17:51:04] 2026-01-27 16:44:13,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,149 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 17:51:04] 2026-01-27 16:44:13,149 | INFO     | job 6982919488 has completed (purged errors)
[2026-01-27 17:51:04] 2026-01-27 16:44:13,149 | INFO     | overall cleanup function is called
[2026-01-27 17:51:04] 2026-01-27 16:44:14,158 | INFO     | --- collectZombieJob: --- 10, [582006]
[2026-01-27 17:51:04] 2026-01-27 16:44:14,159 | INFO     | zombie collector waiting for pid 582006
[2026-01-27 17:51:04] 2026-01-27 16:44:14,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 17:51:04] 2026-01-27 16:44:14,159 | INFO     | collected zombie processes
[2026-01-27 17:51:04] 2026-01-27 16:44:14,159 | INFO     | will attempt to kill all subprocesses of pid=582006
[2026-01-27 17:51:04] 2026-01-27 16:44:14,656 | INFO     | process IDs to be killed: [582006] (in reverse order)
[2026-01-27 17:51:04] 2026-01-27 16:44:14,773 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 17:51:04] 2026-01-27 16:44:14,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 17:51:04] 2026-01-27 16:44:14,786 | INFO     | did not find any defunct processes belonging to 582006
[2026-01-27 17:51:04] 2026-01-27 16:44:14,799 | INFO     | did not find any defunct processes belonging to 582006
[2026-01-27 17:51:04] 2026-01-27 16:44:14,799 | INFO     | ready for new job
[2026-01-27 17:51:04] 2026-01-27 16:44:14,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 17:51:04] 2026-01-27 16:44:14,802 | INFO     | **************************************
[2026-01-27 17:51:04] 2026-01-27 16:44:14,802 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 17:51:04] 2026-01-27 16:44:14,802 | INFO     | **************************************
[2026-01-27 17:51:04] 2026-01-27 16:44:14,802 | INFO     | 
[2026-01-27 17:51:04] 2026-01-27 16:44:14,806 | INFO     | architecture information:
[2026-01-27 17:51:04] 2026-01-27 16:44:14,807 | INFO     | executing command: cat /etc/os-release
[2026-01-27 17:51:04] 2026-01-27 16:44:14,826 | INFO     | cat /etc/os-release:
[2026-01-27 17:51:04] NAME="CentOS Linux"
[2026-01-27 17:51:04] VERSION="7 (Core)"
[2026-01-27 17:51:04] ID="centos"
[2026-01-27 17:51:04] ID_LIKE="rhel fedora"
[2026-01-27 17:51:04] VERSION_ID="7"
[2026-01-27 17:51:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 17:51:04] ANSI_COLOR="0;31"
[2026-01-27 17:51:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 17:51:04] HOME_URL="https://www.centos.org/"
[2026-01-27 17:51:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 17:51:04] 
[2026-01-27 17:51:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 17:51:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 17:51:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 17:51:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 17:51:04] 
[2026-01-27 17:51:04] 2026-01-27 16:44:14,826 | INFO     | **************************************
[2026-01-27 17:51:04] 2026-01-27 16:44:15,329 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-27 17:51:04] 2026-01-27 16:44:15,346 | INFO     | sufficient remaining disk space (680542601216 B)
[2026-01-27 17:51:04] 2026-01-27 16:44:15,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 17:51:04] 2026-01-27 16:44:15,346 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 17:51:04] 2026-01-27 16:44:15,346 | INFO     | update_server=False
[2026-01-27 17:51:04] 2026-01-27 16:44:15,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 17:51:04] 2026-01-27 16:44:15,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 17:51:04] 2026-01-27 16:44:15,480 | INFO     | all data control threads have been joined
[2026-01-27 17:51:04] 2026-01-27 16:44:15,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:51:04] 2026-01-27 16:44:15,721 | INFO     | aborting loop
[2026-01-27 17:51:04] 2026-01-27 16:44:16,302 | INFO     | all job control threads have been joined
[2026-01-27 17:51:04] 2026-01-27 16:44:16,352 | INFO     | [job] retrieve thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:16,373 | INFO     | [data] copytool_in thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:16,444 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:16,483 | INFO     | [data] control thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:16,703 | INFO     | all payload control threads have been joined
[2026-01-27 17:51:04] 2026-01-27 16:44:16,726 | INFO     | [job] job monitor thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,135 | INFO     | [payload] validate_post thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,305 | INFO     | [job] control thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,329 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,352 | INFO     | [data] copytool_out thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,396 | INFO     | [job] validate thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,441 | INFO     | [payload] failed_post thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,519 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:51:04] 2026-01-27 16:44:17,709 | INFO     | [payload] control thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:17,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 17:51:04] 2026-01-27 16:44:18,700 | INFO     | [job] queue monitor thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:21,908 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 17:51:04] 2026-01-27 16:44:39,197 | INFO     | [monitor] cgroup control has ended
[2026-01-27 17:51:04] 2026-01-27 16:44:40,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22657279428416)>', '<ExcThread(monitor, started 22657040131840)>']
[2026-01-27 17:51:04] 2026-01-27 16:44:45,288 | INFO     | PID=576841 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 17:51:04] 2026-01-27 16:44:45,288 | INFO     | .. there are 5 such processes running
[2026-01-27 17:51:04] 2026-01-27 16:44:45,289 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 17:51:04] 2026-01-27 16:44:45,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 17:51:04] 2026-01-27 16:44:45,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 17:51:04] 2026-01-27 16:44:45,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 17:51:04] 2026-01-27 16:44:45,289 | INFO     | [monitor] control thread has ended
[2026-01-27 17:51:04] 2026-01-27 16:44:45,545 | INFO     | all workflow threads have been joined
[2026-01-27 17:51:04] 2026-01-27 16:44:45,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 17:51:04] 2026-01-27 16:44:45,545 | INFO     | traces error code: 0
[2026-01-27 17:51:04] 2026-01-27 16:44:45,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 17:51:04] 2026-01-27 16:44:45,704 [wrapper] ==== pilot stdout END ====
[2026-01-27 17:51:04] 2026-01-27 16:44:45,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 17:51:04] 2026-01-27 16:44:45,710 [wrapper] pilotpid: 576841
[2026-01-27 17:51:04] 2026-01-27 16:44:45,714 [wrapper] Pilot exit status: 0
[2026-01-27 17:51:04] 2026-01-27 16:44:45,724 [wrapper] pandaids: 6982919488
[2026-01-27 17:51:04] 2026-01-27 16:44:45,817 [wrapper] cleanup supervisor_pilot  719214 576842
[2026-01-27 17:51:04] 2026-01-27 16:44:45,820 [wrapper] Test setup, not cleaning
[2026-01-27 17:51:04] 2026-01-27 16:44:45,823 [wrapper] apfmon messages muted
[2026-01-27 17:51:04] 2026-01-27 16:44:45,826 [wrapper] ==== wrapper stdout END ====
[2026-01-27 17:51:04] 2026-01-27 16:44:45,828 [wrapper] ==== wrapper stderr END ====
[2026-01-27 17:51:04]  *** Error codes and diagnostics ***
[2026-01-27 17:51:04]     "exeErrorCode": 0,
[2026-01-27 17:51:04]     "exeErrorDiag": "",
[2026-01-27 17:51:04]     "pilotErrorCode": 0,
[2026-01-27 17:51:04]     "pilotErrorDiag": "",
[2026-01-27 17:51:04]  *** Listing of results directory ***
[2026-01-27 17:51:04] total 664860
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc    584422 Jan 25 10:42 pilot3.tar.gz
[2026-01-27 17:51:04] -rwx------ 1 boinc boinc     36322 Jan 25 10:45 runpilot2-wrapper.sh
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc      5111 Jan 25 10:48 queuedata.json
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc       100 Jan 27 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 17:51:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 14:41 run_atlas
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc       105 Jan 27 14:41 job.xml
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc      6639 Jan 27 14:42 init_data.xml
[2026-01-27 17:51:04] -rw-r--r-- 2 boinc boinc 490047078 Jan 27 14:42 EVNT.48310721._000153.pool.root.1
[2026-01-27 17:51:04] drwxrwx--x 2 boinc boinc      4096 Jan 27 14:42 shared
[2026-01-27 17:51:04] -rw-r--r-- 2 boinc boinc    597757 Jan 27 14:42 input.tar.gz
[2026-01-27 17:51:04] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:42 start_atlas.sh
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc         0 Jan 27 14:42 boinc_lockfile
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc      2533 Jan 27 14:42 pandaJob.out
[2026-01-27 17:51:04] -rw------- 1 boinc boinc   1004835 Jan 27 14:42 agis_schedconf.cvmfs.json
[2026-01-27 17:51:04] -rw------- 1 boinc boinc       452 Jan 27 14:42 workernode_map.json
[2026-01-27 17:51:04] drwx------ 5 boinc boinc      4096 Jan 27 14:42 pilot3
[2026-01-27 17:51:04] -rw------- 1 boinc boinc 183011419 Jan 27 17:43 HITS.48310724._007617.pool.root.1
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc       529 Jan 27 17:43 boinc_task_state.xml
[2026-01-27 17:51:04] -rw------- 1 boinc boinc      1047 Jan 27 17:44 memory_monitor_summary.json
[2026-01-27 17:51:04] -rw------- 1 boinc boinc   1516246 Jan 27 17:44 agis_ddmendpoints.agis.ALL.json
[2026-01-27 17:51:04] -rw------- 1 boinc boinc    364264 Jan 27 17:44 log.48310724._007617.job.log.tgz.1
[2026-01-27 17:51:04] -rw------- 1 boinc boinc      6423 Jan 27 17:44 heartbeat.json
[2026-01-27 17:51:04] -rw------- 1 boinc boinc        95 Jan 27 17:44 pilot_heartbeat.json
[2026-01-27 17:51:04] -rw------- 1 boinc boinc      4828 Jan 27 17:44 pilotlog.txt
[2026-01-27 17:51:04] -rw------- 1 boinc boinc   1544819 Jan 27 17:44 log.48310724._007617.job.log.1
[2026-01-27 17:51:04] -rw------- 1 boinc boinc       357 Jan 27 17:44 output.list
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc       620 Jan 27 17:44 runtime_log
[2026-01-27 17:51:04] -rw------- 1 boinc boinc   1925120 Jan 27 17:44 result.tar.gz
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc      9205 Jan 27 17:44 runtime_log.err
[2026-01-27 17:51:04] -rw------- 1 boinc boinc       669 Jan 27 17:44 eowKDmyrB48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOg0KDm23pXnm.diag
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc        26 Jan 27 17:51 wrapper_checkpoint.txt
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc      8192 Jan 27 17:51 boinc_mmap_file
[2026-01-27 17:51:04] -rw-r--r-- 1 boinc boinc     20865 Jan 27 17:51 stderr.txt
[2026-01-27 17:51:04] HITS file was successfully produced:
[2026-01-27 17:51:04] -rw------- 1 boinc boinc 183011419 Jan 27 17:43 shared/HITS.pool.root.1
[2026-01-27 17:51:04]  *** Contents of shared directory: ***
[2026-01-27 17:51:04] total 659776
[2026-01-27 17:51:04] -rw-r--r-- 2 boinc boinc 490047078 Jan 27 14:42 ATLAS.root_0
[2026-01-27 17:51:04] -rw-r--r-- 2 boinc boinc    597757 Jan 27 14:42 input.tar.gz
[2026-01-27 17:51:04] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:42 start_atlas.sh
[2026-01-27 17:51:04] -rw------- 1 boinc boinc 183011419 Jan 27 17:43 HITS.pool.root.1
[2026-01-27 17:51:04] -rw------- 1 boinc boinc   1925120 Jan 27 17:44 result.tar.gz
17:51:06 (572693): run_atlas exited; CPU time 42299.528277
17:51:06 (572693): called boinc_finish(0)

</stderr_txt>
]]>

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