Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 15:58:16 (5404): vboxwrapper version 26210
2026-01-25 15:58:16 (5404): BOINC client version: 8.2.8
2026-01-25 15:58:17 (5404): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-01-25 15:58:18 (5404): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 15:58:18 (5404): Create VM. (boinc_c85c7eb3a150b844, slot#0)
2026-01-25 15:58:18 (5404): Setting Memory Size for VM. (4800MB)
2026-01-25 15:58:19 (5404): Setting CPU Count for VM. (8)
2026-01-25 15:58:19 (5404): Setting Chipset Options for VM.
2026-01-25 15:58:19 (5404): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 15:58:20 (5404): Setting Boot Options for VM.
2026-01-25 15:58:20 (5404): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 15:58:20 (5404): Enabling VM Network Access.
2026-01-25 15:58:21 (5404): Disabling USB Support for VM.
2026-01-25 15:58:21 (5404): Disabling COM Port Support for VM.
2026-01-25 15:58:21 (5404): Disabling LPT Port Support for VM.
2026-01-25 15:58:21 (5404): Disabling Audio Support for VM.
2026-01-25 15:58:22 (5404): Disabling Clipboard Support for VM.
2026-01-25 15:58:22 (5404): Disabling Drag and Drop Support for VM.
2026-01-25 15:58:22 (5404): Adding storage controller(s) to VM.
2026-01-25 15:58:22 (5404): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 15:58:25 (5404): Adding VirtualBox Guest Additions to VM.
2026-01-25 15:58:25 (5404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 15:58:25 (5404): forwarding host port 49609 to guest port 80
2026-01-25 15:58:25 (5404): Enabling remote desktop for VM.
2026-01-25 15:58:26 (5404): Enabling shared directory for VM.
2026-01-25 15:58:27 (5404): Starting VM using VBoxManage interface. (boinc_c85c7eb3a150b844, slot#0)
2026-01-25 15:58:34 (5404): Successfully started VM. (PID = '7144')
2026-01-25 15:58:34 (5404): Reporting VM Process ID to BOINC.
2026-01-25 15:58:34 (5404): Guest Log: BIOS: VirtualBox 7.1.4
2026-01-25 15:58:34 (5404): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 15:58:34 (5404): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-25 15:58:34 (5404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 15:58:34 (5404): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 15:58:34 (5404): Detected: Web Application Enabled (http://localhost:49609)
2026-01-25 15:58:34 (5404): Detected: Remote Desktop Enabled (localhost:49610)
2026-01-25 15:58:34 (5404): Preference change detected
2026-01-25 15:58:34 (5404): Setting CPU throttle for VM. (100%)
2026-01-25 15:58:34 (5404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 15:58:36 (5404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 15:58:36 (5404): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 15:58:39 (5404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 15:58:39 (5404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 15:58:39 (5404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 15:58:44 (5404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 15:58:44 (5404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-25 15:58:49 (5404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000388 main     Log opened 2026-01-25T15:58:48.238068000Z
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000593 main     OS Product: Linux
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000633 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000660 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000687 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000688 main     Process ID: 1378
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.000688 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 15:58:49 (5404): Guest Log: 00:00:00.001714 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 15:58:50 (5404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 15:58:50 (5404): Guest Log: [INFO] Mounting shared directory
2026-01-25 15:58:50 (5404): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 15:58:59 (5404): Guest Log: 00:00:10.005366 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 221 511 000ns (GuestNow=1 769 353 139 020 710 000 ns GuestLast=1 769 356 728 242 221 000 ns fSetTimeLastLoop=true )
2026-01-25 15:59:40 (5404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 15:59:40 (5404): Guest Log: [INFO] Detected branch: prod
2026-01-25 15:59:40 (5404): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 15:59:40 (5404): Guest Log: Copying input files
2026-01-25 15:59:43 (5404): Guest Log: Copied input files into RunAtlas.
2026-01-25 15:59:43 (5404): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 15:59:43 (5404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 15:59:43 (5404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 15:59:43 (5404): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 15:59:53 (5404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 15:59:53 (5404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 15:59:53 (5404): Guest Log: 2.6.3.0 1683 0 32192 155511 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 15:59:54 (5404): Guest Log: copied the webapp to /var/www
2026-01-25 15:59:54 (5404): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-25 15:59:54 (5404): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-25 15:59:55 (5404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 15:59:55 (5404): Guest Log:  *** Starting ATLAS job. (PandaID=6982379024 taskID=48310724) ***
2026-01-25 16:10:59 (5404): VM state change detected. (old = 'running', new = 'paused')
2026-01-25 16:23:54 (5404): VM state change detected. (old = 'paused', new = 'running')
2026-01-25 17:51:38 (5404): Status Report: Elapsed Time: '6000.000000'
2026-01-25 17:51:38 (5404): Status Report: CPU Time: '42867.078125'
2026-01-25 17:57:06 (5404): Guest Log:  *** Job finished ***
2026-01-25 17:57:06 (5404): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:43:48,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:43:48,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:05,683 | INFO     | [monitor] cgroup control has ended
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:06,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358875473728)>', '<ExcThread(monitor, started 140358432311040)>']
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:07,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:07,861 | INFO     | [monitor] control thread has ended
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:11,998 | INFO     | all workflow threads have been joined
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:11,998 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:11,998 | INFO     | traces error code: 0
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:11,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,214 [wrapper] ==== pilot stdout END ====
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,222 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,230 [wrapper] pilotpid: 6112
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,237 [wrapper] Pilot exit status: 0
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,366 [wrapper] pandaids: 6982379024
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,408 [wrapper] cleanup supervisor_pilot 25662 6113
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,416 [wrapper] Test setup, not cleaning
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,423 [wrapper] apfmon messages muted
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,430 [wrapper] ==== wrapper stdout END ====
2026-01-25 17:57:06 (5404): Guest Log: 2026-01-25 16:44:12,436 [wrapper] ==== wrapper stderr END ====
2026-01-25 17:57:06 (5404): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 17:57:06 (5404): Guest Log:     "exeErrorCode": 0,
2026-01-25 17:57:06 (5404): Guest Log:     "exeErrorDiag": "",
2026-01-25 17:57:06 (5404): Guest Log:     "pilotErrorCode": 0,
2026-01-25 17:57:06 (5404): Guest Log:     "pilotErrorDiag": "",
2026-01-25 17:57:06 (5404): Guest Log:  *** Listing of results directory ***
2026-01-25 17:57:06 (5404): Guest Log: total 186384
2026-01-25 17:57:06 (5404): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 04:03 pilot3.tar.gz
2026-01-25 17:57:06 (5404): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 04:49 runpilot2-wrapper.sh
2026-01-25 17:57:06 (5404): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 04:49 queuedata.json
2026-01-25 17:57:06 (5404): Guest Log: -rwxr-xr-x. 1 atlas atlas      8719 Jan 25 14:59 init_data.xml
2026-01-25 17:57:06 (5404): Guest Log: -rwxr-xr-x. 1 atlas atlas    597760 Jan 25 14:59 input.tar.gz
2026-01-25 17:57:06 (5404): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 14:59 start_atlas.sh
2026-01-25 17:57:06 (5404): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 14:59 EVNT.48310721._000103.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 17:57:06 (5404): Guest Log: -rw-r--r--. 1 atlas atlas      2533 Jan 25 14:59 pandaJob.out
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 25 15:00 agis_schedconf.cvmfs.json
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 15:00 agis_ddmendpoints.agis.ALL.json
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas       421 Jan 25 15:00 workernode_map.json
2026-01-25 17:57:06 (5404): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 15:01 pilot3
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas 184526981 Jan 25 16:42 HITS.48310724._005115.pool.root.1
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas      1030 Jan 25 16:43 memory_monitor_summary.json
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas    349863 Jan 25 16:43 log.48310724._005115.job.log.tgz.1
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas      6332 Jan 25 16:43 heartbeat.json
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas        95 Jan 25 16:43 pilot_heartbeat.json
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas      4873 Jan 25 16:44 pilotlog.txt
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas    878023 Jan 25 16:44 log.48310724._005115.job.log.1
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 16:44 output.list
2026-01-25 17:57:06 (5404): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 16:44 runtime_log
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas   1249280 Jan 25 16:44 result.tar.gz
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas       664 Jan 25 16:44 xm0KDmHF738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjb6KDma1t18m.diag
2026-01-25 17:57:06 (5404): Guest Log: -rw-r--r--. 1 atlas atlas      8771 Jan 25 16:44 runtime_log.err
2026-01-25 17:57:06 (5404): Guest Log: Looking for outputfile HITS.48310724._005115.pool.root.1
2026-01-25 17:57:06 (5404): Guest Log: HITS file was successfully produced
2026-01-25 17:57:06 (5404): Guest Log: -rw-------. 1 atlas atlas 184526981 Jan 25 16:42 /home/atlas/RunAtlas/HITS.48310724._005115.pool.root.1
2026-01-25 17:57:08 (5404): Guest Log: Successfully finished the ATLAS job!
2026-01-25 17:57:08 (5404): Guest Log: Copying the results back to the shared directory!
2026-01-25 17:57:08 (5404): Guest Log:  *** Contents of shared directory: ***
2026-01-25 17:57:08 (5404): Guest Log: total 664636
2026-01-25 17:57:08 (5404): Guest Log: -rwxrwxrwx. 1 root root 494180467 Jan 25 14:58 ATLAS.root_0
2026-01-25 17:57:08 (5404): Guest Log: -rwxrwxrwx. 1 root root 184526981 Jan 25  2026 HITS.pool.root.1
2026-01-25 17:57:08 (5404): Guest Log: -rwxrwxrwx. 1 root root      8719 Jan 25 14:58 init_data.xml
2026-01-25 17:57:08 (5404): Guest Log: -rwxrwxrwx. 1 root root    597760 Jan 25 13:10 input.tar.gz
2026-01-25 17:57:08 (5404): Guest Log: -rwxrwxrwx. 1 root root   1249280 Jan 25  2026 result.tar.gz
2026-01-25 17:57:08 (5404): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 13:10 start_atlas.sh
2026-01-25 17:57:08 (5404): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 17:57:08 (5404): VM Completion File Detected.
2026-01-25 17:57:08 (5404): Powering off VM.
2026-01-25 17:57:09 (5404): Successfully stopped VM.
2026-01-25 17:57:09 (5404): Deregistering VM. (boinc_c85c7eb3a150b844, slot#0)
2026-01-25 17:57:09 (5404): Removing network bandwidth throttle group from VM.
2026-01-25 17:57:09 (5404): Removing VM from VirtualBox.
2026-01-25 17:57:14 (5404): called boinc_finish(0)

</stderr_txt>
]]>

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