Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 14:06:16 (27568): vboxwrapper version 26210
2026-01-25 14:06:16 (27568): BOINC client version: 8.2.8
2026-01-25 14:06:17 (27568): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-25 14:06:17 (27568): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 14:06:17 (27568): Create VM. (boinc_d973bb78e70eedb7, slot#12)
2026-01-25 14:06:18 (27568): Setting Memory Size for VM. (4096MB)
2026-01-25 14:06:18 (27568): Setting CPU Count for VM. (1)
2026-01-25 14:06:18 (27568): Setting Chipset Options for VM.
2026-01-25 14:06:19 (27568): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 14:06:19 (27568): Setting Boot Options for VM.
2026-01-25 14:06:19 (27568): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 14:06:20 (27568): Enabling VM Network Access.
2026-01-25 14:06:20 (27568): Disabling USB Support for VM.
2026-01-25 14:06:20 (27568): Disabling COM Port Support for VM.
2026-01-25 14:06:20 (27568): Disabling LPT Port Support for VM.
2026-01-25 14:06:21 (27568): Disabling Audio Support for VM.
2026-01-25 14:06:21 (27568): Disabling Clipboard Support for VM.
2026-01-25 14:06:21 (27568): Disabling Drag and Drop Support for VM.
2026-01-25 14:06:21 (27568): Adding storage controller(s) to VM.
2026-01-25 14:06:22 (27568): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 14:06:22 (27568): Adding VirtualBox Guest Additions to VM.
2026-01-25 14:06:22 (27568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 14:06:23 (27568): forwarding host port 62238 to guest port 80
2026-01-25 14:06:23 (27568): Enabling remote desktop for VM.
2026-01-25 14:06:23 (27568): Enabling shared directory for VM.
2026-01-25 14:06:24 (27568): Starting VM using VBoxManage interface. (boinc_d973bb78e70eedb7, slot#12)
2026-01-25 14:06:28 (27568): Successfully started VM. (PID = '51000')
2026-01-25 14:06:28 (27568): Reporting VM Process ID to BOINC.
2026-01-25 14:06:28 (27568): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-25 14:06:28 (27568): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 14:06:28 (27568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-25 14:06:28 (27568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 14:06:28 (27568): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 14:06:28 (27568): Detected: Web Application Enabled (http://localhost:62238)
2026-01-25 14:06:28 (27568): Detected: Remote Desktop Enabled (localhost:62240)
2026-01-25 14:06:28 (27568): Preference change detected
2026-01-25 14:06:28 (27568): Setting CPU throttle for VM. (100%)
2026-01-25 14:06:29 (27568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 14:06:30 (27568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 14:06:30 (27568): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 14:06:32 (27568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 14:06:32 (27568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 14:06:32 (27568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 14:06:35 (27568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 14:06:35 (27568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-25 14:06:40 (27568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000150 main     Log opened 2026-01-25T14:06:38.275058000Z
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000242 main     OS Product: Linux
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000260 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000283 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000284 main     Process ID: 1238
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.000284 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 14:06:40 (27568): Guest Log: 00:00:00.001120 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 14:06:40 (27568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 14:06:40 (27568): Guest Log: [INFO] Mounting shared directory
2026-01-25 14:06:40 (27568): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 14:06:50 (27568): Guest Log: 00:00:10.013002 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 225 961 000ns (GuestNow=1 769 346 410 061 449 000 ns GuestLast=1 769 349 998 287 410 000 ns fSetTimeLastLoop=true )
2026-01-25 14:07:01 (27568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 14:07:01 (27568): Guest Log: [INFO] Detected branch: prod
2026-01-25 14:07:01 (27568): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 14:07:01 (27568): Guest Log: Copying input files
2026-01-25 14:07:03 (27568): Guest Log: Copied input files into RunAtlas.
2026-01-25 14:07:03 (27568): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-25 14:07:12 (27568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 14:07:12 (27568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 14:07:12 (27568): Guest Log: 2.6.3.0 1513 0 29500 155509 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-25 14:07:12 (27568): Guest Log: copied the webapp to /var/www
2026-01-25 14:07:12 (27568): Guest Log: core_number=1
2026-01-25 14:07:12 (27568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 14:07:12 (27568): Guest Log:  *** Starting ATLAS job. (PandaID=6982026507 taskID=48310840) ***
2026-01-25 15:46:31 (27568): Status Report: Elapsed Time: '6000.000000'
2026-01-25 15:46:31 (27568): Status Report: CPU Time: '5896.796875'
2026-01-25 17:26:34 (27568): Status Report: Elapsed Time: '12000.000000'
2026-01-25 17:26:34 (27568): Status Report: CPU Time: '11861.656250'
2026-01-25 19:06:36 (27568): Status Report: Elapsed Time: '18000.000000'
2026-01-25 19:06:36 (27568): Status Report: CPU Time: '17824.046875'
2026-01-25 20:40:11 (27568): Guest Log:  *** Job finished ***
2026-01-25 20:40:11 (27568): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:39:38,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:39:38,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:39:54,415 | INFO     | [monitor] cgroup control has ended
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:39:55,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913575069504)>', '<ExcThread(monitor, started 139912913348352)>']
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:39:56,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:39:56,402 | INFO     | [monitor] control thread has ended
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,551 | INFO     | all workflow threads have been joined
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,551 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,551 | INFO     | traces error code: 0
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,655 [wrapper] ==== pilot stdout END ====
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,657 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,659 [wrapper] pilotpid: 5862
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,662 [wrapper] Pilot exit status: 0
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,694 [wrapper] pandaids: 6982026507
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,706 [wrapper] cleanup supervisor_pilot 30606 5863
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,707 [wrapper] Test setup, not cleaning
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,709 [wrapper] apfmon messages muted
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,711 [wrapper] ==== wrapper stdout END ====
2026-01-25 20:40:11 (27568): Guest Log: 2026-01-25 19:40:00,712 [wrapper] ==== wrapper stderr END ====
2026-01-25 20:40:11 (27568): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 20:40:11 (27568): Guest Log:     "exeErrorCode": 0,
2026-01-25 20:40:11 (27568): Guest Log:     "exeErrorDiag": "",
2026-01-25 20:40:11 (27568): Guest Log:     "pilotErrorCode": 0,
2026-01-25 20:40:11 (27568): Guest Log:     "pilotErrorDiag": "",
2026-01-25 20:40:11 (27568): Guest Log:  *** Listing of results directory ***
2026-01-25 20:40:11 (27568): Guest Log: total 204468
2026-01-25 20:40:11 (27568): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 02:18 pilot3.tar.gz
2026-01-25 20:40:11 (27568): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 02:22 runpilot2-wrapper.sh
2026-01-25 20:40:11 (27568): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 02:26 queuedata.json
2026-01-25 20:40:11 (27568): Guest Log: -rwxr-xr-x. 1 atlas atlas      9358 Jan 25 13:07 init_data.xml
2026-01-25 20:40:11 (27568): Guest Log: -rwxr-xr-x. 1 atlas atlas    597758 Jan 25 13:07 input.tar.gz
2026-01-25 20:40:11 (27568): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 13:07 start_atlas.sh
2026-01-25 20:40:11 (27568): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 13:07 EVNT.48310836._000053.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 20:40:11 (27568): Guest Log: -rw-r--r--. 1 atlas atlas      2500 Jan 25 13:07 pandaJob.out
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas        50 Jan 25 13:07 setup.sh.local
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas   1004254 Jan 25 13:07 agis_schedconf.cvmfs.json
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas       424 Jan 25 13:07 workernode_map.json
2026-01-25 20:40:11 (27568): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 13:07 pilot3
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas 197879242 Jan 25 19:38 HITS.48310840._002422.pool.root.1
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas      1023 Jan 25 19:38 memory_monitor_summary.json
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 19:39 agis_ddmendpoints.agis.ALL.json
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas    503746 Jan 25 19:39 log.48310840._002422.job.log.tgz.1
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas      6350 Jan 25 19:39 heartbeat.json
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas        95 Jan 25 19:39 pilot_heartbeat.json
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas      4987 Jan 25 19:40 pilotlog.txt
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas   3308286 Jan 25 19:40 log.48310840._002422.job.log.1
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 19:40 output.list
2026-01-25 20:40:11 (27568): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 19:40 runtime_log
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas   3829760 Jan 25 19:40 result.tar.gz
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas       655 Jan 25 19:40 vQrMDm9w438nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7Z6KDmR8Ewsn.diag
2026-01-25 20:40:11 (27568): Guest Log: -rw-r--r--. 1 atlas atlas      9114 Jan 25 19:40 runtime_log.err
2026-01-25 20:40:11 (27568): Guest Log: Looking for outputfile HITS.48310840._002422.pool.root.1
2026-01-25 20:40:11 (27568): Guest Log: HITS file was successfully produced
2026-01-25 20:40:11 (27568): Guest Log: -rw-------. 1 atlas atlas 197879242 Jan 25 19:38 /home/atlas/RunAtlas/HITS.48310840._002422.pool.root.1
2026-01-25 20:40:11 (27568): Guest Log: Successfully finished the ATLAS job!
2026-01-25 20:40:11 (27568): Guest Log: Copying the results back to the shared directory!
2026-01-25 20:40:11 (27568): Guest Log:  *** Contents of shared directory: ***
2026-01-25 20:40:11 (27568): Guest Log: total 714780
2026-01-25 20:40:11 (27568): Guest Log: -rwxrwxrwx. 1 root root 529592935 Jan 25 13:06 ATLAS.root_0
2026-01-25 20:40:11 (27568): Guest Log: -rwxrwxrwx. 1 root root 197879242 Jan 25  2026 HITS.pool.root.1
2026-01-25 20:40:11 (27568): Guest Log: -rwxrwxrwx. 1 root root      9358 Jan 25 13:06 init_data.xml
2026-01-25 20:40:11 (27568): Guest Log: -rwxrwxrwx. 1 root root    597758 Jan 25 12:17 input.tar.gz
2026-01-25 20:40:11 (27568): Guest Log: -rwxrwxrwx. 1 root root   3829760 Jan 25  2026 result.tar.gz
2026-01-25 20:40:11 (27568): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 12:17 start_atlas.sh
2026-01-25 20:40:12 (27568): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 20:40:12 (27568): VM Completion File Detected.
2026-01-25 20:40:12 (27568): Powering off VM.
2026-01-25 20:40:12 (27568): Successfully stopped VM.
2026-01-25 20:40:12 (27568): Deregistering VM. (boinc_d973bb78e70eedb7, slot#12)
2026-01-25 20:40:12 (27568): Removing network bandwidth throttle group from VM.
2026-01-25 20:40:13 (27568): Removing VM from VirtualBox.
2026-01-25 20:40:18 (27568): called boinc_finish(0)

</stderr_txt>
]]>

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