Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:05:26 (12057): wrapper (7.7.26015): starting
20:05:26 (12057): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 20:05:26] Arguments: --nthreads 8
[2026-01-25 20:05:26] Threads: 8
[2026-01-25 20:05:26] Checking for CVMFS
[2026-01-25 20:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 20:05:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 20:05:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 20:05:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 20:05:29] 2.11.2.0 18604 58843 132600 155518 3 9 24210590 25165824 899 130560 0 21599599 99.833 15044296 3266 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 20:05:29] CVMFS is ok
[2026-01-25 20:05:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 20:05:29] Checking for apptainer binary...
[2026-01-25 20:05:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 20:05:29] Running /usr/bin/apptainer --version
[2026-01-25 20:05:30] apptainer version 1.3.2-1.el7
[2026-01-25 20:05:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 20:05:45] cg-vwn461.simple-grid.lan
[2026-01-25 20:05:45] apptainer works
[2026-01-25 20:05:45] Set ATHENA_PROC_NUMBER=8
[2026-01-25 20:05:45] Set ATHENA_CORE_NUMBER=8
[2026-01-25 20:05:45] Starting ATLAS job with PandaID=6982374561
[2026-01-25 20:05:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 23:59:24]  *** The last 200 lines of the pilot log: ***
[2026-01-25 23:59:24] 2026-01-25 22:58:09,684 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6982374561/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,684 | INFO     | extracted standard info from prmon json
[2026-01-25 23:59:24] 2026-01-25 22:58:09,685 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 23:59:24] 2026-01-25 22:58:09,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 23:59:24] 2026-01-25 22:58:09,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 23:59:24] 2026-01-25 22:58:09,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 23:59:24] 2026-01-25 22:58:09,689 | INFO     | fitting pss+swap vs Time
[2026-01-25 23:59:24] 2026-01-25 22:58:09,690 | INFO     | sum of square deviations: 3212467674.5
[2026-01-25 23:59:24] 2026-01-25 22:58:09,692 | INFO     | sum of deviations: 66578679756.50003
[2026-01-25 23:59:24] 2026-01-25 22:58:09,692 | INFO     | mean x: 1769375221.5
[2026-01-25 23:59:24] 2026-01-25 22:58:09,692 | INFO     | mean y: 2456652.9862385322
[2026-01-25 23:59:24] 2026-01-25 22:58:09,692 | INFO     | intersect: -36668002999.08482
[2026-01-25 23:59:24] 2026-01-25 22:58:09,692 | INFO     | chi2: 8.555299529183774
[2026-01-25 23:59:24] 2026-01-25 22:58:09,693 | INFO     | sum of square deviations: 2996454322.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,694 | INFO     | sum of deviations: 79788943731.00003
[2026-01-25 23:59:24] 2026-01-25 22:58:09,698 | INFO     | mean x: 1769375069.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,698 | INFO     | mean y: 2465789.2582159624
[2026-01-25 23:59:24] 2026-01-25 22:58:09,698 | INFO     | intersect: -47112074480.20473
[2026-01-25 23:59:24] 2026-01-25 22:58:09,698 | INFO     | chi2: 7.8737609317372135
[2026-01-25 23:59:24] 2026-01-25 22:58:09,698 | INFO     | current chi2=7.8737609317372135 (change=7.966273946595336 %)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,699 | INFO     | right removable region: 212
[2026-01-25 23:59:24] 2026-01-25 22:58:09,699 | INFO     | sum of square deviations: 2996454322.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,700 | INFO     | sum of deviations: -9537069034.000011
[2026-01-25 23:59:24] 2026-01-25 22:58:09,701 | INFO     | mean x: 1769375374.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,701 | INFO     | mean y: 2510351.9483568077
[2026-01-25 23:59:24] 2026-01-25 22:58:09,701 | INFO     | intersect: 5634051258.48035
[2026-01-25 23:59:24] 2026-01-25 22:58:09,701 | INFO     | chi2: 3.4590037966564924
[2026-01-25 23:59:24] 2026-01-25 22:58:09,701 | INFO     | current chi2=3.4590037966564924 (change=59.568875585744664 %)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,702 | INFO     | sum of square deviations: 2790348132.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,703 | INFO     | sum of deviations: -62106322016.50001
[2026-01-25 23:59:24] 2026-01-25 22:58:09,703 | INFO     | mean x: 1769375526.5
[2026-01-25 23:59:24] 2026-01-25 22:58:09,704 | INFO     | mean y: 2549126.908653846
[2026-01-25 23:59:24] 2026-01-25 22:58:09,704 | INFO     | intersect: 39384519052.704
[2026-01-25 23:59:24] 2026-01-25 22:58:09,704 | INFO     | chi2: 1.0440660771089876
[2026-01-25 23:59:24] 2026-01-25 22:58:09,704 | INFO     | current chi2=1.0440660771089876 (change=69.81598927072031 %)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,705 | INFO     | sum of square deviations: 2593916542.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,706 | INFO     | sum of deviations: -65780954482.999985
[2026-01-25 23:59:24] 2026-01-25 22:58:09,706 | INFO     | mean x: 1769375679.0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,706 | INFO     | mean y: 2551906.103448276
[2026-01-25 23:59:24] 2026-01-25 22:58:09,706 | INFO     | intersect: 44873394556.223755
[2026-01-25 23:59:24] 2026-01-25 22:58:09,707 | INFO     | chi2: 0.9681942446999888
[2026-01-25 23:59:24] 2026-01-25 22:58:09,707 | INFO     | current chi2=0.9681942446999888 (change=7.2669569553574025 %)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,707 | INFO     | left removable region: 30
[2026-01-25 23:59:24] 2026-01-25 22:58:09,707 | INFO     | sum of square deviations: 1869302025.5
[2026-01-25 23:59:24] 2026-01-25 22:58:09,709 | INFO     | sum of deviations: -33428388935.999992
[2026-01-25 23:59:24] 2026-01-25 22:58:09,709 | INFO     | mean x: 1769375953.5
[2026-01-25 23:59:24] 2026-01-25 22:58:09,709 | INFO     | mean y: 2549016.5934065934
[2026-01-25 23:59:24] 2026-01-25 22:58:09,709 | INFO     | intersect: 31643978138.665386
[2026-01-25 23:59:24] 2026-01-25 22:58:09,709 | INFO     | chi2: 0.15863751190582928
[2026-01-25 23:59:24] 2026-01-25 22:58:09,710 | INFO     | current memory leak: -17.88 B/s (using 182 data points, chi2=0.16)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,710 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,710 | INFO     | ..............................
[2026-01-25 23:59:24] 2026-01-25 22:58:09,710 | INFO     | . Timing measurements:
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . get job = 0 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . initial setup = 123 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . payload setup = 143 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . stage-in = 0 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . payload execution = 13414 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . stage-out = 4 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | . log creation = 1 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,711 | INFO     | ..............................
[2026-01-25 23:59:24] 2026-01-25 22:58:09,854 | INFO     | 
[2026-01-25 23:59:24] 2026-01-25 22:58:09,854 | INFO     | job summary report
[2026-01-25 23:59:24] 2026-01-25 22:58:09,854 | INFO     | --------------------------------------------------
[2026-01-25 23:59:24] 2026-01-25 22:58:09,854 | INFO     | PanDA job id: 6982374561
[2026-01-25 23:59:24] 2026-01-25 22:58:09,854 | INFO     | task id: 48310724
[2026-01-25 23:59:24] 2026-01-25 22:58:09,854 | INFO     | errors: (none)
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | pilot state: finished 
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | transexitcode: 0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | exeerrorcode: 0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | exeerrordiag: 
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | exitcode: 0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | exitmsg: OK
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | cpuconsumptiontime: 49956 s
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | nevents: 400
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | neventsw: 0
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | pid: 20503
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | pgrp: 20503
[2026-01-25 23:59:24] 2026-01-25 22:58:09,855 | INFO     | corecount: 8
[2026-01-25 23:59:24] 2026-01-25 22:58:09,856 | INFO     | event service: False
[2026-01-25 23:59:24] 2026-01-25 22:58:09,856 | INFO     | sizes: {0: 2283163, 1: 2284222, 2: 2284310, 13: 2284310, 13561: 2314471, 13562: 2314470, 13566: 2323654, 13567: 2323904}
[2026-01-25 23:59:24] 2026-01-25 22:58:09,856 | INFO     | --------------------------------------------------
[2026-01-25 23:59:24] 2026-01-25 22:58:09,856 | INFO     | 
[2026-01-25 23:59:24] 2026-01-25 22:58:09,856 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-01-25 23:59:24] 2026-01-25 22:58:10,253 | INFO     | PID=16038 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 23:59:24] 2026-01-25 22:58:10,253 | INFO     | .. there are 2 such processes running
[2026-01-25 23:59:24] 2026-01-25 22:58:10,371 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,371 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,371 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | job 6982374561 has completed (purged errors)
[2026-01-25 23:59:24] 2026-01-25 22:58:10,373 | INFO     | overall cleanup function is called
[2026-01-25 23:59:24] 2026-01-25 22:58:11,382 | INFO     | --- collectZombieJob: --- 10, [20503]
[2026-01-25 23:59:24] 2026-01-25 22:58:11,382 | INFO     | zombie collector waiting for pid 20503
[2026-01-25 23:59:24] 2026-01-25 22:58:11,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 23:59:24] 2026-01-25 22:58:11,382 | INFO     | collected zombie processes
[2026-01-25 23:59:24] 2026-01-25 22:58:11,382 | INFO     | will attempt to kill all subprocesses of pid=20503
[2026-01-25 23:59:24] 2026-01-25 22:58:11,450 | INFO     | process IDs to be killed: [20503] (in reverse order)
[2026-01-25 23:59:24] 2026-01-25 22:58:12,242 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 23:59:24] 2026-01-25 22:58:12,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 23:59:24] 2026-01-25 22:58:12,244 | INFO     | did not find any defunct processes belonging to 20503
[2026-01-25 23:59:24] 2026-01-25 22:58:12,246 | INFO     | did not find any defunct processes belonging to 20503
[2026-01-25 23:59:24] 2026-01-25 22:58:12,246 | INFO     | ready for new job
[2026-01-25 23:59:24] 2026-01-25 22:58:12,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 23:59:24] 2026-01-25 22:58:12,248 | INFO     | **************************************
[2026-01-25 23:59:24] 2026-01-25 22:58:12,248 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 23:59:24] 2026-01-25 22:58:12,248 | INFO     | **************************************
[2026-01-25 23:59:24] 2026-01-25 22:58:12,248 | INFO     | 
[2026-01-25 23:59:24] 2026-01-25 22:58:12,249 | INFO     | pilot is running in a VM
[2026-01-25 23:59:24] 2026-01-25 22:58:12,249 | INFO     | architecture information:
[2026-01-25 23:59:24] 2026-01-25 22:58:12,255 | INFO     | executing command: cat /etc/os-release
[2026-01-25 23:59:24] 2026-01-25 22:58:12,387 | INFO     | cat /etc/os-release:
[2026-01-25 23:59:24] NAME="CentOS Linux"
[2026-01-25 23:59:24] VERSION="7 (Core)"
[2026-01-25 23:59:24] ID="centos"
[2026-01-25 23:59:24] ID_LIKE="rhel fedora"
[2026-01-25 23:59:24] VERSION_ID="7"
[2026-01-25 23:59:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 23:59:24] ANSI_COLOR="0;31"
[2026-01-25 23:59:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 23:59:24] HOME_URL="https://www.centos.org/"
[2026-01-25 23:59:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 23:59:24] 
[2026-01-25 23:59:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 23:59:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 23:59:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 23:59:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 23:59:24] 
[2026-01-25 23:59:24] 2026-01-25 22:58:12,387 | INFO     | **************************************
[2026-01-25 23:59:24] 2026-01-25 22:58:12,891 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-01-25 23:59:24] 2026-01-25 22:58:13,053 | INFO     | sufficient remaining disk space (496149463040 B)
[2026-01-25 23:59:24] 2026-01-25 22:58:13,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 23:59:24] 2026-01-25 22:58:13,054 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 23:59:24] 2026-01-25 22:58:13,054 | INFO     | update_server=False
[2026-01-25 23:59:24] 2026-01-25 22:58:13,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 23:59:24] 2026-01-25 22:58:13,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 23:59:24] 2026-01-25 22:58:13,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 23:59:24] 2026-01-25 22:58:13,057 | INFO     | aborting loop
[2026-01-25 23:59:24] 2026-01-25 22:58:13,375 | INFO     | all data control threads have been joined
[2026-01-25 23:59:24] 2026-01-25 22:58:13,886 | INFO     | all payload control threads have been joined
[2026-01-25 23:59:24] 2026-01-25 22:58:13,894 | INFO     | all job control threads have been joined
[2026-01-25 23:59:24] 2026-01-25 22:58:14,060 | INFO     | [job] retrieve thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,063 | INFO     | [job] job monitor thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,370 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,381 | INFO     | [data] control thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,444 | INFO     | [data] copytool_in thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,495 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 23:59:24] 2026-01-25 22:58:14,865 | INFO     | [payload] failed_post thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,892 | INFO     | [payload] control thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:14,900 | INFO     | [job] control thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:15,064 | INFO     | [data] copytool_out thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:15,250 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:15,274 | INFO     | [payload] validate_post thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:15,441 | INFO     | [job] validate thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:15,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 23:59:24] 2026-01-25 22:58:15,860 | INFO     | [job] queue monitor thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:19,697 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:23,429 | INFO     | job.realtimelogging is not enabled
[2026-01-25 23:59:24] 2026-01-25 22:58:24,435 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 23:59:24] 2026-01-25 22:58:42,363 | INFO     | PID=16038 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 23:59:24] 2026-01-25 22:58:42,363 | INFO     | .. there are 2 such processes running
[2026-01-25 23:59:24] 2026-01-25 22:58:42,365 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 23:59:24] 2026-01-25 22:58:42,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 23:59:24] 2026-01-25 22:58:42,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 23:59:24] 2026-01-25 22:59:12,037 | INFO     | [monitor] cgroup control has ended
[2026-01-25 23:59:24] 2026-01-25 22:59:14,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633375594304)>', '<ExcThread(monitor, started 139633157261056)>']
[2026-01-25 23:59:24] 2026-01-25 22:59:14,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 23:59:24] 2026-01-25 22:59:14,557 | INFO     | [monitor] control thread has ended
[2026-01-25 23:59:24] 2026-01-25 22:59:19,153 | INFO     | all workflow threads have been joined
[2026-01-25 23:59:24] 2026-01-25 22:59:19,153 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 23:59:24] 2026-01-25 22:59:19,153 | INFO     | traces error code: 0
[2026-01-25 23:59:24] 2026-01-25 22:59:19,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 23:59:24] 2026-01-25 22:59:19,477 [wrapper] ==== pilot stdout END ====
[2026-01-25 23:59:24] 2026-01-25 22:59:19,522 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 23:59:24] 2026-01-25 22:59:19,621 [wrapper] pilotpid: 16038
[2026-01-25 23:59:24] 2026-01-25 22:59:19,708 [wrapper] Pilot exit status: 0
[2026-01-25 23:59:24] 2026-01-25 22:59:20,228 [wrapper] pandaids: 6982374561
[2026-01-25 23:59:24] 2026-01-25 22:59:21,564 [wrapper] cleanup supervisor_pilot 26253 16039
[2026-01-25 23:59:24] 2026-01-25 22:59:21,629 [wrapper] Test setup, not cleaning
[2026-01-25 23:59:24] 2026-01-25 22:59:21,732 [wrapper] apfmon messages muted
[2026-01-25 23:59:24] 2026-01-25 22:59:21,834 [wrapper] ==== wrapper stdout END ====
[2026-01-25 23:59:24] 2026-01-25 22:59:21,981 [wrapper] ==== wrapper stderr END ====
[2026-01-25 23:59:24]  *** Error codes and diagnostics ***
[2026-01-25 23:59:24]     "exeErrorCode": 0,
[2026-01-25 23:59:24]     "exeErrorDiag": "",
[2026-01-25 23:59:24]     "pilotErrorCode": 0,
[2026-01-25 23:59:24]     "pilotErrorDiag": "",
[2026-01-25 23:59:24]  *** Listing of results directory ***
[2026-01-25 23:59:24] total 672568
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc    584422 Jan 25 03:18 pilot3.tar.gz
[2026-01-25 23:59:24] -rwx------. 1 boinc boinc     36322 Jan 25 03:22 runpilot2-wrapper.sh
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc      5111 Jan 25 03:24 queuedata.json
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc       100 Jan 25 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 23:59:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 20:05 run_atlas
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc       105 Jan 25 20:05 job.xml
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc      6392 Jan 25 20:05 init_data.xml
[2026-01-25 23:59:24] -rw-r--r--. 2 boinc boinc 496749068 Jan 25 20:05 EVNT.48310721._000089.pool.root.1
[2026-01-25 23:59:24] -rw-r--r--. 2 boinc boinc     15845 Jan 25 20:05 start_atlas.sh
[2026-01-25 23:59:24] drwxrwx--x. 2 boinc boinc        68 Jan 25 20:05 shared
[2026-01-25 23:59:24] -rw-r--r--. 2 boinc boinc    597762 Jan 25 20:05 input.tar.gz
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc         0 Jan 25 20:05 boinc_lockfile
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc      2534 Jan 25 20:05 pandaJob.out
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc       413 Jan 25 20:11 workernode_map.json
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc   1004246 Jan 25 20:11 agis_schedconf.cvmfs.json
[2026-01-25 23:59:24] drwx------. 5 boinc boinc      4096 Jan 25 20:11 pilot3
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc 183239538 Jan 25 23:56 HITS.48310724._004437.pool.root.1
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc       532 Jan 25 23:57 boinc_task_state.xml
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc      1012 Jan 25 23:58 memory_monitor_summary.json
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc   1516246 Jan 25 23:58 agis_ddmendpoints.agis.ALL.json
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc    480168 Jan 25 23:58 log.48310724._004437.job.log.tgz.1
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc      6319 Jan 25 23:58 heartbeat.json
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc        95 Jan 25 23:58 pilot_heartbeat.json
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc      8192 Jan 25 23:59 boinc_mmap_file
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc        28 Jan 25 23:59 wrapper_checkpoint.txt
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc      4953 Jan 25 23:59 pilotlog.txt
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc   1916485 Jan 25 23:59 log.48310724._004437.job.log.1
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc       357 Jan 25 23:59 output.list
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc       620 Jan 25 23:59 runtime_log
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc   2416640 Jan 25 23:59 result.tar.gz
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc      8832 Jan 25 23:59 runtime_log.err
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc       656 Jan 25 23:59 L9wMDmew438n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCszKDmqzktFm.diag
[2026-01-25 23:59:24] -rw-r--r--. 1 boinc boinc     20816 Jan 25 23:59 stderr.txt
[2026-01-25 23:59:24] HITS file was successfully produced:
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc 183239538 Jan 25 23:56 shared/HITS.pool.root.1
[2026-01-25 23:59:24]  *** Contents of shared directory: ***
[2026-01-25 23:59:24] total 667016
[2026-01-25 23:59:24] -rw-r--r--. 2 boinc boinc 496749068 Jan 25 20:05 ATLAS.root_0
[2026-01-25 23:59:24] -rw-r--r--. 2 boinc boinc     15845 Jan 25 20:05 start_atlas.sh
[2026-01-25 23:59:24] -rw-r--r--. 2 boinc boinc    597762 Jan 25 20:05 input.tar.gz
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc 183239538 Jan 25 23:56 HITS.pool.root.1
[2026-01-25 23:59:24] -rw-------. 1 boinc boinc   2416640 Jan 25 23:59 result.tar.gz
23:59:26 (12057): run_atlas exited; CPU time 50089.447478
23:59:26 (12057): called boinc_finish(0)

</stderr_txt>
]]>

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