Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:09:47 (974004): wrapper (7.7.26015): starting
01:09:47 (974004): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 01:09:47] Arguments: --nthreads 4
[2026-01-26 01:09:47] Threads: 4
[2026-01-26 01:09:47] Checking for CVMFS
[2026-01-26 01:09:47] No cvmfs_config command found, will try listing directly
[2026-01-26 01:09:47] CVMFS is ok
[2026-01-26 01:09:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 01:09:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 01:09:47] Further information can be found at the LHC@home message board.
[2026-01-26 01:09:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 01:09:47] Checking for apptainer binary...
[2026-01-26 01:09:47] which: no apptainer in ((null))
[2026-01-26 01:09:47] apptainer is not installed, using version from CVMFS
[2026-01-26 01:09:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 01:09:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-01-26 01:09:47] apptainer works
[2026-01-26 01:09:47] Set ATHENA_PROC_NUMBER=4
[2026-01-26 01:09:47] Set ATHENA_CORE_NUMBER=4
[2026-01-26 01:09:47] Starting ATLAS job with PandaID=6982691125
[2026-01-26 01:09:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 03:52:03]  *** The last 200 lines of the pilot log: ***
[2026-01-26 03:52:03] 2026-01-26 02:50:53,856 | INFO     | chi2: 1.3428594746780285
[2026-01-26 03:52:03] 2026-01-26 02:50:53,856 | INFO     | sum of square deviations: 1110539892.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,857 | INFO     | sum of deviations: 13939487529.000002
[2026-01-26 03:52:03] 2026-01-26 02:50:53,857 | INFO     | mean x: 1769390864.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,857 | INFO     | mean y: 2318275.908496732
[2026-01-26 03:52:03] 2026-01-26 02:50:53,857 | INFO     | intersect: -22207061198.282005
[2026-01-26 03:52:03] 2026-01-26 02:50:53,858 | INFO     | chi2: 1.3442333434075588
[2026-01-26 03:52:03] 2026-01-26 02:50:53,858 | INFO     | current chi2=1.3442333434075588 (change=-0.10230919581959888 %)
[2026-01-26 03:52:03] 2026-01-26 02:50:53,858 | INFO     | right removable region: 152
[2026-01-26 03:52:03] 2026-01-26 02:50:53,858 | INFO     | sum of square deviations: 1110539892.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,859 | INFO     | sum of deviations: -1910046334.9999993
[2026-01-26 03:52:03] 2026-01-26 02:50:53,859 | INFO     | mean x: 1769391169.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,859 | INFO     | mean y: 2340560.1895424835
[2026-01-26 03:52:03] 2026-01-26 02:50:53,860 | INFO     | intersect: 3045562277.7303424
[2026-01-26 03:52:03] 2026-01-26 02:50:53,860 | INFO     | chi2: 0.04745564869883463
[2026-01-26 03:52:03] 2026-01-26 02:50:53,860 | INFO     | current chi2=0.04745564869883463 (change=96.46607485044458 %)
[2026-01-26 03:52:03] 2026-01-26 02:50:53,860 | INFO     | sum of square deviations: 1005179777.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,861 | INFO     | sum of deviations: 935036243.0000001
[2026-01-26 03:52:03] 2026-01-26 02:50:53,861 | INFO     | mean x: 1769391321.5
[2026-01-26 03:52:03] 2026-01-26 02:50:53,861 | INFO     | mean y: 2336544.2702702703
[2026-01-26 03:52:03] 2026-01-26 02:50:53,862 | INFO     | intersect: -1643582973.3208256
[2026-01-26 03:52:03] 2026-01-26 02:50:53,862 | INFO     | chi2: 0.0002164557715168652
[2026-01-26 03:52:03] 2026-01-26 02:50:53,862 | INFO     | current chi2=0.0002164557715168652 (change=99.54387775227656 %)
[2026-01-26 03:52:03] 2026-01-26 02:50:53,862 | INFO     | sum of square deviations: 906703512.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,863 | INFO     | sum of deviations: 700949109.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,863 | INFO     | mean x: 1769391474.0
[2026-01-26 03:52:03] 2026-01-26 02:50:53,863 | INFO     | mean y: 2336904.951048951
[2026-01-26 03:52:03] 2026-01-26 02:50:53,863 | INFO     | intersect: -1365534026.1284556
[2026-01-26 03:52:03] 2026-01-26 02:50:53,864 | INFO     | chi2: 0.00016245947116377948
[2026-01-26 03:52:03] 2026-01-26 02:50:53,864 | INFO     | current chi2=0.00016245947116377948 (change=24.945650547774186 %)
[2026-01-26 03:52:03] 2026-01-26 02:50:53,864 | INFO     | left removable region: 30
[2026-01-26 03:52:03] 2026-01-26 02:50:53,864 | INFO     | sum of square deviations: 563026370.5
[2026-01-26 03:52:03] 2026-01-26 02:50:53,865 | INFO     | sum of deviations: 174650442.00000003
[2026-01-26 03:52:03] 2026-01-26 02:50:53,865 | INFO     | mean x: 1769391748.5
[2026-01-26 03:52:03] 2026-01-26 02:50:53,865 | INFO     | mean y: 2337730.1475409837
[2026-01-26 03:52:03] 2026-01-26 02:50:53,865 | INFO     | intersect: -546526527.6175896
[2026-01-26 03:52:03] 2026-01-26 02:50:53,865 | INFO     | chi2: 5.2407291967619543e-05
[2026-01-26 03:52:03] 2026-01-26 02:50:53,866 | INFO     | current memory leak: 0.31 B/s (using 122 data points, chi2=0.00)
[2026-01-26 03:52:03] 2026-01-26 02:50:53,866 | INFO     | could have reported an average CPU frequency of 2586 MHz (9 samples)
[2026-01-26 03:52:03] 2026-01-26 02:50:53,866 | INFO     | ..............................
[2026-01-26 03:52:03] 2026-01-26 02:50:53,866 | INFO     | . Timing measurements:
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . get job = 0 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . initial setup = 6 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . payload setup = 6 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . stage-in = 0 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . payload execution = 9624 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . stage-out = 0 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | . log creation = 0 s
[2026-01-26 03:52:03] 2026-01-26 02:50:53,867 | INFO     | ..............................
[2026-01-26 03:52:03] 2026-01-26 02:50:54,469 | INFO     | 
[2026-01-26 03:52:03] 2026-01-26 02:50:54,470 | INFO     | job summary report
[2026-01-26 03:52:03] 2026-01-26 02:50:54,470 | INFO     | --------------------------------------------------
[2026-01-26 03:52:03] 2026-01-26 02:50:54,470 | INFO     | PanDA job id: 6982691125
[2026-01-26 03:52:03] 2026-01-26 02:50:54,470 | INFO     | task id: 48310826
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | errors: (none)
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | pilot state: finished 
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | transexitcode: 0
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | exeerrorcode: 0
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | exeerrordiag: 
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | exitcode: 0
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | exitmsg: OK
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | cpuconsumptiontime: 36987 s
[2026-01-26 03:52:03] 2026-01-26 02:50:54,471 | INFO     | nevents: 400
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | neventsw: 0
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | pid: 983082
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | pgrp: 983082
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | corecount: 4
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | event service: False
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | sizes: {0: 2283819, 1: 2284280, 12: 2284280, 9635: 2312625, 9636: 2321701, 9637: 2321903}
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | --------------------------------------------------
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | 
[2026-01-26 03:52:03] 2026-01-26 02:50:54,472 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-01-26 03:52:03] 2026-01-26 02:50:54,494 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,495 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,495 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,495 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 03:52:03] 2026-01-26 02:50:54,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 03:52:03] 2026-01-26 02:50:54,498 | INFO     | job 6982691125 has completed (purged errors)
[2026-01-26 03:52:03] 2026-01-26 02:50:54,498 | INFO     | overall cleanup function is called
[2026-01-26 03:52:03] 2026-01-26 02:50:54,717 | WARNING  | process 983082 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 03:52:03] 2026-01-26 02:50:55,511 | INFO     | --- collectZombieJob: --- 10, [983082]
[2026-01-26 03:52:03] 2026-01-26 02:50:55,512 | INFO     | zombie collector waiting for pid 983082
[2026-01-26 03:52:03] 2026-01-26 02:50:55,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 03:52:03] 2026-01-26 02:50:55,512 | INFO     | collected zombie processes
[2026-01-26 03:52:03] 2026-01-26 02:50:55,512 | INFO     | will attempt to kill all subprocesses of pid=983082
[2026-01-26 03:52:03] 2026-01-26 02:50:55,697 | INFO     | PID=978079 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 03:52:03] 2026-01-26 02:50:55,697 | INFO     | .. there are 4 such processes running
[2026-01-26 03:52:03] 2026-01-26 02:50:55,721 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 03:52:03] 2026-01-26 02:50:55,722 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 03:52:03] 2026-01-26 02:50:55,723 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 03:52:03] 2026-01-26 02:50:55,723 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 03:52:03] 2026-01-26 02:50:55,724 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6982691125/payload.stdout) since it has not been created yet
[2026-01-26 03:52:03] 2026-01-26 02:50:55,724 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-01-26 03:52:03] 2026-01-26 02:50:55,740 | INFO     | sufficient remaining disk space (678115147776 B)
[2026-01-26 03:52:03] 2026-01-26 02:50:55,741 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 03:52:03] 2026-01-26 02:50:55,741 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6982691125/HITS.48310826._009985.pool.root.1 since it does not exist
[2026-01-26 03:52:03] 2026-01-26 02:50:56,609 | INFO     | process IDs to be killed: [983082] (in reverse order)
[2026-01-26 03:52:03] 2026-01-26 02:50:56,669 | INFO     | number of running child processes to parent process 983082: 1
[2026-01-26 03:52:03] 2026-01-26 02:50:56,669 | INFO     | maximum number of monitored processes: 6
[2026-01-26 03:52:03] 2026-01-26 02:50:56,669 | INFO     | aborting job monitoring since job object (job id=6982691125) has expired
[2026-01-26 03:52:03] 2026-01-26 02:50:56,728 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 03:52:03] 2026-01-26 02:50:56,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 03:52:03] 2026-01-26 02:50:56,742 | INFO     | did not find any defunct processes belonging to 983082
[2026-01-26 03:52:03] 2026-01-26 02:50:56,754 | INFO     | did not find any defunct processes belonging to 983082
[2026-01-26 03:52:03] 2026-01-26 02:50:56,755 | INFO     | ready for new job
[2026-01-26 03:52:03] 2026-01-26 02:50:56,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 03:52:03] 2026-01-26 02:50:56,757 | INFO     | **************************************
[2026-01-26 03:52:03] 2026-01-26 02:50:56,757 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 03:52:03] 2026-01-26 02:50:56,758 | INFO     | **************************************
[2026-01-26 03:52:03] 2026-01-26 02:50:56,758 | INFO     | 
[2026-01-26 03:52:03] 2026-01-26 02:50:56,762 | INFO     | architecture information:
[2026-01-26 03:52:03] 2026-01-26 02:50:56,762 | INFO     | executing command: cat /etc/os-release
[2026-01-26 03:52:03] 2026-01-26 02:50:56,779 | INFO     | cat /etc/os-release:
[2026-01-26 03:52:03] NAME="CentOS Linux"
[2026-01-26 03:52:03] VERSION="7 (Core)"
[2026-01-26 03:52:03] ID="centos"
[2026-01-26 03:52:03] ID_LIKE="rhel fedora"
[2026-01-26 03:52:03] VERSION_ID="7"
[2026-01-26 03:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 03:52:03] ANSI_COLOR="0;31"
[2026-01-26 03:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 03:52:03] HOME_URL="https://www.centos.org/"
[2026-01-26 03:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 03:52:03] 
[2026-01-26 03:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 03:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 03:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 03:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 03:52:03] 
[2026-01-26 03:52:03] 2026-01-26 02:50:56,780 | INFO     | **************************************
[2026-01-26 03:52:03] 2026-01-26 02:50:57,283 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-01-26 03:52:03] 2026-01-26 02:50:57,301 | INFO     | sufficient remaining disk space (678112002048 B)
[2026-01-26 03:52:03] 2026-01-26 02:50:57,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 03:52:03] 2026-01-26 02:50:57,302 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 03:52:03] 2026-01-26 02:50:57,302 | INFO     | update_server=False
[2026-01-26 03:52:03] 2026-01-26 02:50:57,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 03:52:03] 2026-01-26 02:50:57,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 03:52:03] 2026-01-26 02:50:57,303 | INFO     | will abort loop
[2026-01-26 03:52:03] 2026-01-26 02:50:57,381 | INFO     | all data control threads have been joined
[2026-01-26 03:52:03] 2026-01-26 02:50:57,573 | INFO     | all job control threads have been joined
[2026-01-26 03:52:03] 2026-01-26 02:50:58,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 03:52:03] 2026-01-26 02:50:58,308 | INFO     | [job] retrieve thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,308 | INFO     | [job] job monitor thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,384 | INFO     | [data] control thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,449 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,475 | INFO     | [job] validate thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,576 | INFO     | all payload control threads have been joined
[2026-01-26 03:52:03] 2026-01-26 02:50:58,578 | INFO     | [job] control thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,682 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,862 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,906 | INFO     | [payload] validate_post thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:58,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 03:52:03] 2026-01-26 02:50:59,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 03:52:03] 2026-01-26 02:50:59,231 | INFO     | [data] copytool_in thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:59,357 | INFO     | [payload] failed_post thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:59,581 | INFO     | [payload] control thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:50:59,984 | INFO     | [job] queue monitor thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:51:00,026 | INFO     | [data] copytool_out thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:51:03,171 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:51:07,703 | INFO     | job.realtimelogging is not enabled
[2026-01-26 03:52:03] 2026-01-26 02:51:08,709 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 03:52:03] 2026-01-26 02:51:19,846 | INFO     | [monitor] cgroup control has ended
[2026-01-26 03:52:03] 2026-01-26 02:51:21,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23004001904448)>', '<ExcThread(monitor, started 23003762272000)>']
[2026-01-26 03:52:03] 2026-01-26 02:51:26,795 | INFO     | all workflow threads have been joined
[2026-01-26 03:52:03] 2026-01-26 02:51:26,797 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 03:52:03] 2026-01-26 02:51:26,797 | INFO     | traces error code: 0
[2026-01-26 03:52:03] 2026-01-26 02:51:26,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 03:52:03] 2026-01-26 02:51:28,280 | INFO     | PID=978079 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 03:52:03] 2026-01-26 02:51:28,280 | INFO     | .. there are 4 such processes running
[2026-01-26 03:52:03] 2026-01-26 02:51:28,280 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 03:52:03] 2026-01-26 02:51:28,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 03:52:03] 2026-01-26 02:51:28,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 03:52:03] 2026-01-26 02:51:28,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 03:52:03] 2026-01-26 02:51:28,281 | INFO     | [monitor] control thread has ended
[2026-01-26 03:52:03] 2026-01-26 02:51:28,502 [wrapper] ==== pilot stdout END ====
[2026-01-26 03:52:03] 2026-01-26 02:51:28,505 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 03:52:03] 2026-01-26 02:51:28,508 [wrapper] pilotpid: 978079
[2026-01-26 03:52:03] 2026-01-26 02:51:28,510 [wrapper] Pilot exit status: 0
[2026-01-26 03:52:03] 2026-01-26 02:51:28,521 [wrapper] pandaids: 6982691125
[2026-01-26 03:52:03] 2026-01-26 02:51:28,597 [wrapper] cleanup supervisor_pilot 1087103 978080
[2026-01-26 03:52:03] 2026-01-26 02:51:28,600 [wrapper] Test setup, not cleaning
[2026-01-26 03:52:03] 2026-01-26 02:51:28,603 [wrapper] apfmon messages muted
[2026-01-26 03:52:03] 2026-01-26 02:51:28,605 [wrapper] ==== wrapper stdout END ====
[2026-01-26 03:52:03] 2026-01-26 02:51:28,608 [wrapper] ==== wrapper stderr END ====
[2026-01-26 03:52:03]  *** Error codes and diagnostics ***
[2026-01-26 03:52:03]     "exeErrorCode": 0,
[2026-01-26 03:52:03]     "exeErrorDiag": "",
[2026-01-26 03:52:03]     "pilotErrorCode": 0,
[2026-01-26 03:52:03]     "pilotErrorDiag": "",
[2026-01-26 03:52:03]  *** Listing of results directory ***
[2026-01-26 03:52:03] total 673036
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc    584422 Jan 25 07:30 pilot3.tar.gz
[2026-01-26 03:52:03] -rwx------ 1 boinc boinc     36322 Jan 25 07:31 runpilot2-wrapper.sh
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc      5111 Jan 25 07:34 queuedata.json
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc       100 Jan 26 01:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 03:52:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 01:09 run_atlas
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc       105 Jan 26 01:09 job.xml
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc      6639 Jan 26 01:09 init_data.xml
[2026-01-26 03:52:03] -rw-r--r-- 2 boinc boinc 500266875 Jan 26 01:09 EVNT.48310824._000118.pool.root.1
[2026-01-26 03:52:03] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:09 start_atlas.sh
[2026-01-26 03:52:03] drwxrwx--x 2 boinc boinc      4096 Jan 26 01:09 shared
[2026-01-26 03:52:03] -rw-r--r-- 2 boinc boinc    597753 Jan 26 01:09 input.tar.gz
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc         0 Jan 26 01:09 boinc_lockfile
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc      2523 Jan 26 01:09 pandaJob.out
[2026-01-26 03:52:03] -rw------- 1 boinc boinc   1004246 Jan 26 01:09 agis_schedconf.cvmfs.json
[2026-01-26 03:52:03] -rw------- 1 boinc boinc   1516246 Jan 26 01:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 03:52:03] -rw------- 1 boinc boinc       448 Jan 26 01:10 workernode_map.json
[2026-01-26 03:52:03] drwx------ 5 boinc boinc      4096 Jan 26 01:10 pilot3
[2026-01-26 03:52:03] -rw------- 1 boinc boinc 181531637 Jan 26 03:50 HITS.48310826._009985.pool.root.1
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc       529 Jan 26 03:50 boinc_task_state.xml
[2026-01-26 03:52:03] -rw------- 1 boinc boinc        95 Jan 26 03:50 pilot_heartbeat.json
[2026-01-26 03:52:03] -rw------- 1 boinc boinc      1034 Jan 26 03:50 memory_monitor_summary.json
[2026-01-26 03:52:03] -rw------- 1 boinc boinc    352399 Jan 26 03:50 log.48310826._009985.job.log.tgz.1
[2026-01-26 03:52:03] -rw------- 1 boinc boinc      6393 Jan 26 03:50 heartbeat.json
[2026-01-26 03:52:03] -rw------- 1 boinc boinc       821 Jan 26 03:51 pilotlog.txt
[2026-01-26 03:52:03] -rw------- 1 boinc boinc   1372741 Jan 26 03:51 log.48310826._009985.job.log.1
[2026-01-26 03:52:03] -rw------- 1 boinc boinc       357 Jan 26 03:51 output.list
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc       620 Jan 26 03:51 runtime_log
[2026-01-26 03:52:03] -rw------- 1 boinc boinc   1740800 Jan 26 03:51 result.tar.gz
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc      9204 Jan 26 03:51 runtime_log.err
[2026-01-26 03:52:03] -rw------- 1 boinc boinc       662 Jan 26 03:51 PTPNDmWp838n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPS0KDmxb2Qbn.diag
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc        26 Jan 26 03:52 wrapper_checkpoint.txt
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc      8192 Jan 26 03:52 boinc_mmap_file
[2026-01-26 03:52:03] -rw-r--r-- 1 boinc boinc     21418 Jan 26 03:52 stderr.txt
[2026-01-26 03:52:03] HITS file was successfully produced:
[2026-01-26 03:52:03] -rw------- 1 boinc boinc 181531637 Jan 26 03:50 shared/HITS.pool.root.1
[2026-01-26 03:52:03]  *** Contents of shared directory: ***
[2026-01-26 03:52:03] total 668132
[2026-01-26 03:52:03] -rw-r--r-- 2 boinc boinc 500266875 Jan 26 01:09 ATLAS.root_0
[2026-01-26 03:52:03] -rw-r--r-- 2 boinc boinc     15845 Jan 26 01:09 start_atlas.sh
[2026-01-26 03:52:03] -rw-r--r-- 2 boinc boinc    597753 Jan 26 01:09 input.tar.gz
[2026-01-26 03:52:03] -rw------- 1 boinc boinc 181531637 Jan 26 03:50 HITS.pool.root.1
[2026-01-26 03:52:03] -rw------- 1 boinc boinc   1740800 Jan 26 03:51 result.tar.gz
03:52:05 (974004): run_atlas exited; CPU time 37442.372859
03:52:05 (974004): called boinc_finish(0)

</stderr_txt>
]]>

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