Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:09:59 (1740): wrapper (7.7.26015): starting
20:09:59 (1740): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 20:09:59] Arguments: --nthreads 8
[2026-01-25 20:09:59] Threads: 8
[2026-01-25 20:09:59] Checking for CVMFS
[2026-01-25 20:09:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 20:10:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 20:10:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 20:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 20:10:03] 2.11.2.0 24514 58858 137508 155518 2 56 19731369 25165825 4016 130560 0 24252899 99.818 16404612 3319 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 20:10:03] CVMFS is ok
[2026-01-25 20:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 20:10:03] Checking for apptainer binary...
[2026-01-25 20:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 20:10:03] Running /usr/bin/apptainer --version
[2026-01-25 20:10:03] apptainer version 1.3.2-1.el7
[2026-01-25 20:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 20:10:23] cg-vwn473.simple-grid.lan
[2026-01-25 20:10:23] apptainer works
[2026-01-25 20:10:23] Set ATHENA_PROC_NUMBER=8
[2026-01-25 20:10:23] Set ATHENA_CORE_NUMBER=8
[2026-01-25 20:10:23] Starting ATLAS job with PandaID=6982885277
[2026-01-25 20:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 00:05:20]  *** The last 200 lines of the pilot log: ***
[2026-01-26 00:05:20] 2026-01-25 23:04:35,439 | INFO     | time since job start (13728s) is within the limit (349056.0s)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,506 | INFO     | job 6982885277 has state=finished
[2026-01-26 00:05:20] 2026-01-25 23:04:35,507 | INFO     | preparing for final server update for job 6982885277 in state='finished'
[2026-01-26 00:05:20] 2026-01-25 23:04:35,507 | INFO     | reading metadata from: /var/lib/boinc/slots/18/PanDA_Pilot-6982885277/jobReport.json
[2026-01-26 00:05:20] 2026-01-25 23:04:35,510 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/18/workernode_map.json
[2026-01-26 00:05:20] 2026-01-25 23:04:35,510 | INFO     | this job has now completed (state=finished)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,510 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,510 | INFO     | log transfer has been attempted: DONE
[2026-01-26 00:05:20] 2026-01-25 23:04:35,510 | INFO     | job 6982885277 has finished - writing final server update
[2026-01-26 00:05:20] 2026-01-25 23:04:35,511 | INFO     | total number of processed events: 400 (read)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,513 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6982885277/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,513 | INFO     | extracted standard info from prmon json
[2026-01-26 00:05:20] 2026-01-25 23:04:35,513 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 00:05:20] 2026-01-25 23:04:35,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 00:05:20] 2026-01-25 23:04:35,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 00:05:20] 2026-01-25 23:04:35,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 00:05:20] 2026-01-25 23:04:35,531 | INFO     | fitting pss+swap vs Time
[2026-01-26 00:05:20] 2026-01-25 23:04:35,532 | INFO     | sum of square deviations: 3346927870.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,533 | INFO     | sum of deviations: -3403574117.0000057
[2026-01-26 00:05:20] 2026-01-25 23:04:35,534 | INFO     | mean x: 1769375528.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,534 | INFO     | mean y: 2501343.027149321
[2026-01-26 00:05:20] 2026-01-25 23:04:35,534 | INFO     | intersect: 1801823283.704054
[2026-01-26 00:05:20] 2026-01-25 23:04:35,534 | INFO     | chi2: 4.38978300533469
[2026-01-26 00:05:20] 2026-01-25 23:04:35,535 | INFO     | sum of square deviations: 3124858590.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,536 | INFO     | sum of deviations: 11590101808.99999
[2026-01-26 00:05:20] 2026-01-25 23:04:35,537 | INFO     | mean x: 1769375375.5
[2026-01-26 00:05:20] 2026-01-25 23:04:35,537 | INFO     | mean y: 2511456.1481481483
[2026-01-26 00:05:20] 2026-01-25 23:04:35,537 | INFO     | intersect: -6560102546.933056
[2026-01-26 00:05:20] 2026-01-25 23:04:35,537 | INFO     | chi2: 3.6546119737691494
[2026-01-26 00:05:20] 2026-01-25 23:04:35,537 | INFO     | current chi2=3.6546119737691494 (change=16.74732055484571 %)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,538 | INFO     | right removable region: 215
[2026-01-26 00:05:20] 2026-01-25 23:04:35,538 | INFO     | sum of square deviations: 3124858590.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,540 | INFO     | sum of deviations: -67042271643.49999
[2026-01-26 00:05:20] 2026-01-25 23:04:35,540 | INFO     | mean x: 1769375680.5
[2026-01-26 00:05:20] 2026-01-25 23:04:35,540 | INFO     | mean y: 2544915.2731481483
[2026-01-26 00:05:20] 2026-01-25 23:04:35,540 | INFO     | intersect: 37963611502.76428
[2026-01-26 00:05:20] 2026-01-25 23:04:35,541 | INFO     | chi2: 1.1253091661383319
[2026-01-26 00:05:20] 2026-01-25 23:04:35,541 | INFO     | current chi2=1.1253091661383319 (change=74.36526669380244 %)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,541 | INFO     | sum of square deviations: 2912836010.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,543 | INFO     | sum of deviations: -75384528889.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,543 | INFO     | mean x: 1769375833.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,543 | INFO     | mean y: 2550867.4170616115
[2026-01-26 00:05:20] 2026-01-25 23:04:35,543 | INFO     | intersect: 45794199673.03827
[2026-01-26 00:05:20] 2026-01-25 23:04:35,544 | INFO     | chi2: 0.9982643244462236
[2026-01-26 00:05:20] 2026-01-25 23:04:35,544 | INFO     | current chi2=0.9982643244462236 (change=11.289772225714806 %)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,544 | INFO     | left removable region: 20
[2026-01-26 00:05:20] 2026-01-25 23:04:35,544 | INFO     | sum of square deviations: 2299168690.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,546 | INFO     | sum of deviations: -47830271532.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,546 | INFO     | mean x: 1769375955.0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,546 | INFO     | mean y: 2553677.282051282
[2026-01-26 00:05:20] 2026-01-25 23:04:35,547 | INFO     | intersect: 36811393645.36713
[2026-01-26 00:05:20] 2026-01-25 23:04:35,547 | INFO     | chi2: 0.20406018627396813
[2026-01-26 00:05:20] 2026-01-25 23:04:35,547 | INFO     | current memory leak: -20.80 B/s (using 195 data points, chi2=0.20)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | ..............................
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | . Timing measurements:
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | . get job = 0 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | . initial setup = 107 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | . payload setup = 136 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,548 | INFO     | . stage-in = 0 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,549 | INFO     | . payload execution = 13565 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,549 | INFO     | . stage-out = 6 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,549 | INFO     | . log creation = 1 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,549 | INFO     | ..............................
[2026-01-26 00:05:20] 2026-01-25 23:04:35,788 | INFO     | 
[2026-01-26 00:05:20] 2026-01-25 23:04:35,788 | INFO     | job summary report
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | --------------------------------------------------
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | PanDA job id: 6982885277
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | task id: 48310724
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | errors: (none)
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | pilot state: finished 
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | transexitcode: 0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | exeerrorcode: 0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | exeerrordiag: 
[2026-01-26 00:05:20] 2026-01-25 23:04:35,789 | INFO     | exitcode: 0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | exitmsg: OK
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | cpuconsumptiontime: 52295 s
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | nevents: 400
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | neventsw: 0
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | pid: 10349
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | pgrp: 10349
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | corecount: 8
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | event service: False
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | sizes: {0: 2283163, 1: 2283849, 2: 2284310, 12: 2284310, 13706: 2314443, 13707: 2314442, 13714: 2323626, 13716: 2323876}
[2026-01-26 00:05:20] 2026-01-25 23:04:35,790 | INFO     | --------------------------------------------------
[2026-01-26 00:05:20] 2026-01-25 23:04:35,791 | INFO     | 
[2026-01-26 00:05:20] 2026-01-25 23:04:35,791 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-26 00:05:20] 2026-01-25 23:04:36,059 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,059 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,061 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 00:05:20] 2026-01-25 23:04:36,062 | INFO     | job 6982885277 has completed (purged errors)
[2026-01-26 00:05:20] 2026-01-25 23:04:36,062 | INFO     | overall cleanup function is called
[2026-01-26 00:05:20] 2026-01-25 23:04:37,070 | INFO     | --- collectZombieJob: --- 10, [10349]
[2026-01-26 00:05:20] 2026-01-25 23:04:37,070 | INFO     | zombie collector waiting for pid 10349
[2026-01-26 00:05:20] 2026-01-25 23:04:37,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 00:05:20] 2026-01-25 23:04:37,071 | INFO     | collected zombie processes
[2026-01-26 00:05:20] 2026-01-25 23:04:37,071 | INFO     | will attempt to kill all subprocesses of pid=10349
[2026-01-26 00:05:20] 2026-01-25 23:04:37,193 | INFO     | process IDs to be killed: [10349] (in reverse order)
[2026-01-26 00:05:20] 2026-01-25 23:04:38,015 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 00:05:20] 2026-01-25 23:04:38,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 00:05:20] 2026-01-25 23:04:38,018 | INFO     | did not find any defunct processes belonging to 10349
[2026-01-26 00:05:20] 2026-01-25 23:04:38,021 | INFO     | did not find any defunct processes belonging to 10349
[2026-01-26 00:05:20] 2026-01-25 23:04:38,021 | INFO     | ready for new job
[2026-01-26 00:05:20] 2026-01-25 23:04:38,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 00:05:20] 2026-01-25 23:04:38,023 | INFO     | **************************************
[2026-01-26 00:05:20] 2026-01-25 23:04:38,024 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 00:05:20] 2026-01-25 23:04:38,024 | INFO     | **************************************
[2026-01-26 00:05:20] 2026-01-25 23:04:38,024 | INFO     | 
[2026-01-26 00:05:20] 2026-01-25 23:04:38,024 | INFO     | pilot is running in a VM
[2026-01-26 00:05:20] 2026-01-25 23:04:38,024 | INFO     | architecture information:
[2026-01-26 00:05:20] 2026-01-25 23:04:38,027 | INFO     | executing command: cat /etc/os-release
[2026-01-26 00:05:20] 2026-01-25 23:04:38,264 | INFO     | cat /etc/os-release:
[2026-01-26 00:05:20] NAME="CentOS Linux"
[2026-01-26 00:05:20] VERSION="7 (Core)"
[2026-01-26 00:05:20] ID="centos"
[2026-01-26 00:05:20] ID_LIKE="rhel fedora"
[2026-01-26 00:05:20] VERSION_ID="7"
[2026-01-26 00:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 00:05:20] ANSI_COLOR="0;31"
[2026-01-26 00:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 00:05:20] HOME_URL="https://www.centos.org/"
[2026-01-26 00:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 00:05:20] 
[2026-01-26 00:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 00:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 00:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 00:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 00:05:20] 
[2026-01-26 00:05:20] 2026-01-25 23:04:38,264 | INFO     | **************************************
[2026-01-26 00:05:20] 2026-01-25 23:04:38,767 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-26 00:05:20] 2026-01-25 23:04:38,973 | INFO     | sufficient remaining disk space (496597204992 B)
[2026-01-26 00:05:20] 2026-01-25 23:04:38,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 00:05:20] 2026-01-25 23:04:38,973 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 00:05:20] 2026-01-25 23:04:38,973 | INFO     | update_server=False
[2026-01-26 00:05:20] 2026-01-25 23:04:38,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 00:05:20] 2026-01-25 23:04:38,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 00:05:20] 2026-01-25 23:04:39,322 | INFO     | all data control threads have been joined
[2026-01-26 00:05:20] 2026-01-25 23:04:39,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 00:05:20] 2026-01-25 23:04:39,651 | INFO     | aborting loop
[2026-01-26 00:05:20] 2026-01-25 23:04:39,979 | INFO     | [job] retrieve thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,049 | INFO     | all payload control threads have been joined
[2026-01-26 00:05:20] 2026-01-25 23:04:40,102 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,186 | INFO     | [payload] validate_post thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,327 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,328 | INFO     | [data] control thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,337 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,568 | INFO     | all job control threads have been joined
[2026-01-26 00:05:20] 2026-01-25 23:04:40,657 | INFO     | [job] job monitor thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,806 | INFO     | [payload] failed_post thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 00:05:20] 2026-01-25 23:04:40,835 | INFO     | [job] validate thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,935 | INFO     | [data] copytool_in thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:40,982 | INFO     | [data] copytool_out thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:41,055 | INFO     | [payload] control thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:41,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 00:05:20] 2026-01-25 23:04:41,574 | INFO     | [job] control thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:41,816 | INFO     | [job] queue monitor thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:04:45,525 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 00:05:20] 2026-01-25 23:05:08,635 | INFO     | PID=5843 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 00:05:20] 2026-01-25 23:05:08,635 | INFO     | .. there are 9 such processes running
[2026-01-26 00:05:20] 2026-01-25 23:05:08,636 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 00:05:20] 2026-01-25 23:05:08,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 00:05:20] 2026-01-25 23:05:08,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 00:05:20] 2026-01-25 23:05:10,123 | INFO     | [monitor] cgroup control has ended
[2026-01-26 00:05:20] 2026-01-25 23:05:10,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752709748544)>', '<ExcThread(monitor, started 139752045008640)>']
[2026-01-26 00:05:20] 2026-01-25 23:05:11,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 00:05:20] 2026-01-25 23:05:11,653 | INFO     | [monitor] control thread has ended
[2026-01-26 00:05:20] 2026-01-25 23:05:15,808 | INFO     | all workflow threads have been joined
[2026-01-26 00:05:20] 2026-01-25 23:05:15,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 00:05:20] 2026-01-25 23:05:15,809 | INFO     | traces error code: 0
[2026-01-26 00:05:20] 2026-01-25 23:05:15,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 00:05:20] 2026-01-25 23:05:16,108 [wrapper] ==== pilot stdout END ====
[2026-01-26 00:05:20] 2026-01-25 23:05:16,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 00:05:20] 2026-01-25 23:05:16,297 [wrapper] pilotpid: 5843
[2026-01-26 00:05:20] 2026-01-25 23:05:16,393 [wrapper] Pilot exit status: 0
[2026-01-26 00:05:20] 2026-01-25 23:05:16,774 [wrapper] pandaids: 6982885277
[2026-01-26 00:05:20] 2026-01-25 23:05:17,426 [wrapper] cleanup supervisor_pilot 17885 5844
[2026-01-26 00:05:20] 2026-01-25 23:05:17,527 [wrapper] Test setup, not cleaning
[2026-01-26 00:05:20] 2026-01-25 23:05:17,578 [wrapper] apfmon messages muted
[2026-01-26 00:05:20] 2026-01-25 23:05:17,641 [wrapper] ==== wrapper stdout END ====
[2026-01-26 00:05:20] 2026-01-25 23:05:17,688 [wrapper] ==== wrapper stderr END ====
[2026-01-26 00:05:20]  *** Error codes and diagnostics ***
[2026-01-26 00:05:20]     "exeErrorCode": 0,
[2026-01-26 00:05:20]     "exeErrorDiag": "",
[2026-01-26 00:05:20]     "pilotErrorCode": 0,
[2026-01-26 00:05:20]     "pilotErrorDiag": "",
[2026-01-26 00:05:20]  *** Listing of results directory ***
[2026-01-26 00:05:20] total 668412
[2026-01-26 00:05:20] -rwx------. 1 boinc boinc     36322 Jan 25 07:28 runpilot2-wrapper.sh
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc    584422 Jan 25 07:30 pilot3.tar.gz
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc      5111 Jan 25 07:30 queuedata.json
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc       100 Jan 25 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 00:05:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 20:09 run_atlas
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc       105 Jan 25 20:09 job.xml
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc      6392 Jan 25 20:09 init_data.xml
[2026-01-26 00:05:20] -rw-r--r--. 2 boinc boinc 492454292 Jan 25 20:09 EVNT.48310721._000124.pool.root.1
[2026-01-26 00:05:20] -rw-r--r--. 2 boinc boinc     15845 Jan 25 20:09 start_atlas.sh
[2026-01-26 00:05:20] drwxrwx--x. 2 boinc boinc        68 Jan 25 20:09 shared
[2026-01-26 00:05:20] -rw-r--r--. 2 boinc boinc    597762 Jan 25 20:09 input.tar.gz
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc         0 Jan 25 20:09 boinc_lockfile
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc      2534 Jan 25 20:10 pandaJob.out
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc       415 Jan 25 20:15 workernode_map.json
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc   1004246 Jan 25 20:15 agis_schedconf.cvmfs.json
[2026-01-26 00:05:20] drwx------. 5 boinc boinc      4096 Jan 25 20:15 pilot3
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc 183258353 Jan 26 00:03 HITS.48310724._006197.pool.root.1
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc       532 Jan 26 00:03 boinc_task_state.xml
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc        95 Jan 26 00:04 pilot_heartbeat.json
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc      1025 Jan 26 00:04 memory_monitor_summary.json
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc   1516246 Jan 26 00:04 agis_ddmendpoints.agis.ALL.json
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc    489471 Jan 26 00:04 log.48310724._006197.job.log.tgz.1
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc      6315 Jan 26 00:04 heartbeat.json
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc      8192 Jan 26 00:04 boinc_mmap_file
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc        28 Jan 26 00:04 wrapper_checkpoint.txt
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc      4880 Jan 26 00:05 pilotlog.txt
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc   1916063 Jan 26 00:05 log.48310724._006197.job.log.1
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc       357 Jan 26 00:05 output.list
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc       620 Jan 26 00:05 runtime_log
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc   2426880 Jan 26 00:05 result.tar.gz
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc      8832 Jan 26 00:05 runtime_log.err
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc       656 Jan 26 00:05 hEuNDmEn838n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0N0KDm209Qim.diag
[2026-01-26 00:05:20] -rw-r--r--. 1 boinc boinc     20922 Jan 26 00:05 stderr.txt
[2026-01-26 00:05:20] HITS file was successfully produced:
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc 183258353 Jan 26 00:03 shared/HITS.pool.root.1
[2026-01-26 00:05:20]  *** Contents of shared directory: ***
[2026-01-26 00:05:20] total 662852
[2026-01-26 00:05:20] -rw-r--r--. 2 boinc boinc 492454292 Jan 25 20:09 ATLAS.root_0
[2026-01-26 00:05:20] -rw-r--r--. 2 boinc boinc     15845 Jan 25 20:09 start_atlas.sh
[2026-01-26 00:05:20] -rw-r--r--. 2 boinc boinc    597762 Jan 25 20:09 input.tar.gz
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc 183258353 Jan 26 00:03 HITS.pool.root.1
[2026-01-26 00:05:20] -rw-------. 1 boinc boinc   2426880 Jan 26 00:05 result.tar.gz
00:05:22 (1740): run_atlas exited; CPU time 52501.686802
00:05:22 (1740): called boinc_finish(0)

</stderr_txt>
]]>

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