Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:24:54 (20741): wrapper (7.7.26015): starting
20:24:54 (20741): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 20:24:54] Arguments: --nthreads 8
[2026-01-25 20:24:54] Threads: 8
[2026-01-25 20:24:54] Checking for CVMFS
[2026-01-25 20:24:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 20:24:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 20:24:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 20:24:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 20:24:59] 2.11.2.0 9196 58872 135876 155519 1 56 16178416 25165824 4016 130560 0 20970597 99.785 17435177 2179 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 20:24:59] CVMFS is ok
[2026-01-25 20:24:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 20:24:59] Checking for apptainer binary...
[2026-01-25 20:24:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 20:24:59] Running /usr/bin/apptainer --version
[2026-01-25 20:24:59] apptainer version 1.3.2-1.el7
[2026-01-25 20:24:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 20:25:13] cg-vwn422.simple-grid.lan
[2026-01-25 20:25:13] apptainer works
[2026-01-25 20:25:13] Set ATHENA_PROC_NUMBER=8
[2026-01-25 20:25:13] Set ATHENA_CORE_NUMBER=8
[2026-01-25 20:25:13] Starting ATLAS job with PandaID=6982710744
[2026-01-25 20:25:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 00:28:42]  *** The last 200 lines of the pilot log: ***
[2026-01-26 00:28:42] 2026-01-25 23:27:27,155 | INFO     | total number of processed events: 400 (read)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,157 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6982710744/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,157 | INFO     | extracted standard info from prmon json
[2026-01-26 00:28:42] 2026-01-25 23:27:27,158 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 00:28:42] 2026-01-25 23:27:27,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 00:28:42] 2026-01-25 23:27:27,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 00:28:42] 2026-01-25 23:27:27,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 00:28:42] 2026-01-25 23:27:27,163 | INFO     | fitting pss+swap vs Time
[2026-01-26 00:28:42] 2026-01-25 23:27:27,164 | INFO     | sum of square deviations: 3723716330.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,166 | INFO     | sum of deviations: 12444109556.000004
[2026-01-26 00:28:42] 2026-01-25 23:27:27,166 | INFO     | mean x: 1769376681.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,166 | INFO     | mean y: 2464454.2270742357
[2026-01-26 00:28:42] 2026-01-25 23:27:27,166 | INFO     | intersect: -5910530874.339124
[2026-01-26 00:28:42] 2026-01-25 23:27:27,167 | INFO     | chi2: 6.267073696347246
[2026-01-26 00:28:42] 2026-01-25 23:27:27,167 | INFO     | sum of square deviations: 3485088600.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,169 | INFO     | sum of deviations: 45086144686.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,169 | INFO     | mean x: 1769376528.5
[2026-01-26 00:28:42] 2026-01-25 23:27:27,169 | INFO     | mean y: 2485031.625
[2026-01-26 00:28:42] 2026-01-25 23:27:27,170 | INFO     | intersect: -22887712413.56001
[2026-01-26 00:28:42] 2026-01-25 23:27:27,173 | INFO     | chi2: 4.4858144026618785
[2026-01-26 00:28:42] 2026-01-25 23:27:27,173 | INFO     | current chi2=4.4858144026618785 (change=28.422504345585914 %)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,174 | INFO     | sum of square deviations: 3256879670.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,176 | INFO     | sum of deviations: 44244070063.999985
[2026-01-26 00:28:42] 2026-01-25 23:27:27,176 | INFO     | mean x: 1769376376.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,176 | INFO     | mean y: 2484468.8447488584
[2026-01-26 00:28:42] 2026-01-25 23:27:27,176 | INFO     | intersect: -24034145766.66235
[2026-01-26 00:28:42] 2026-01-25 23:27:27,176 | INFO     | chi2: 4.492020263347557
[2026-01-26 00:28:42] 2026-01-25 23:27:27,177 | INFO     | current chi2=4.492020263347557 (change=-0.1383441250265769 %)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,177 | INFO     | right removable region: 218
[2026-01-26 00:28:42] 2026-01-25 23:27:27,177 | INFO     | sum of square deviations: 3485088600.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,179 | INFO     | sum of deviations: -60050495441.49999
[2026-01-26 00:28:42] 2026-01-25 23:27:27,179 | INFO     | mean x: 1769376833.5
[2026-01-26 00:28:42] 2026-01-25 23:27:27,179 | INFO     | mean y: 2510696.441964286
[2026-01-26 00:28:42] 2026-01-25 23:27:27,179 | INFO     | intersect: 30490101592.80754
[2026-01-26 00:28:42] 2026-01-25 23:27:27,180 | INFO     | chi2: 2.3941033164640952
[2026-01-26 00:28:42] 2026-01-25 23:27:27,180 | INFO     | current chi2=2.3941033164640952 (change=61.79870490657395 %)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,180 | INFO     | sum of square deviations: 3256879670.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,182 | INFO     | sum of deviations: -73234859487.00002
[2026-01-26 00:28:42] 2026-01-25 23:27:27,182 | INFO     | mean x: 1769376986.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,182 | INFO     | mean y: 2519386.392694064
[2026-01-26 00:28:42] 2026-01-25 23:27:27,182 | INFO     | intersect: 39789090607.564514
[2026-01-26 00:28:42] 2026-01-25 23:27:27,183 | INFO     | chi2: 2.0947397957757463
[2026-01-26 00:28:42] 2026-01-25 23:27:27,183 | INFO     | current chi2=2.0947397957757463 (change=12.504202246813875 %)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,183 | INFO     | left removable region: 20
[2026-01-26 00:28:42] 2026-01-25 23:27:27,184 | INFO     | sum of square deviations: 2406926989.5
[2026-01-26 00:28:42] 2026-01-25 23:27:27,185 | INFO     | sum of deviations: -26292615524.0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,185 | INFO     | mean x: 1769376955.5
[2026-01-26 00:28:42] 2026-01-25 23:27:27,186 | INFO     | mean y: 2533172.9393939395
[2026-01-26 00:28:42] 2026-01-25 23:27:27,186 | INFO     | intersect: 19330725598.77249
[2026-01-26 00:28:42] 2026-01-25 23:27:27,186 | INFO     | chi2: 0.1466457496697052
[2026-01-26 00:28:42] 2026-01-25 23:27:27,186 | INFO     | current memory leak: -10.92 B/s (using 198 data points, chi2=0.15)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,191 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | ..............................
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . Timing measurements:
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . get job = 0 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . initial setup = 101 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . payload setup = 121 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . stage-in = 0 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . payload execution = 14035 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . stage-out = 3 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | . log creation = 1 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,192 | INFO     | ..............................
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | 
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | job summary report
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | --------------------------------------------------
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | PanDA job id: 6982710744
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | task id: 48310724
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | errors: (none)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | pilot state: finished 
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | transexitcode: 0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | exeerrorcode: 0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | exeerrordiag: 
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | exitcode: 0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | exitmsg: OK
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | cpuconsumptiontime: 54084 s
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | nevents: 400
[2026-01-26 00:28:42] 2026-01-25 23:27:27,316 | INFO     | neventsw: 0
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | pid: 29402
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | pgrp: 29402
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | corecount: 8
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | event service: False
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | sizes: {0: 2283161, 1: 2283846, 2: 2284307, 12: 2284307, 14161: 2314581, 14164: 2323579, 14168: 2323763, 14169: 2323957}
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | --------------------------------------------------
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | 
[2026-01-26 00:28:42] 2026-01-25 23:27:27,317 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-26 00:28:42] 2026-01-25 23:27:27,666 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,667 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,669 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,669 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 00:28:42] 2026-01-25 23:27:27,669 | INFO     | job 6982710744 has completed (purged errors)
[2026-01-26 00:28:42] 2026-01-25 23:27:27,669 | INFO     | overall cleanup function is called
[2026-01-26 00:28:42] 2026-01-25 23:27:28,679 | INFO     | --- collectZombieJob: --- 10, [29402]
[2026-01-26 00:28:42] 2026-01-25 23:27:28,679 | INFO     | zombie collector waiting for pid 29402
[2026-01-26 00:28:42] 2026-01-25 23:27:28,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 00:28:42] 2026-01-25 23:27:28,679 | INFO     | collected zombie processes
[2026-01-26 00:28:42] 2026-01-25 23:27:28,679 | INFO     | will attempt to kill all subprocesses of pid=29402
[2026-01-26 00:28:42] 2026-01-25 23:27:28,793 | INFO     | process IDs to be killed: [29402] (in reverse order)
[2026-01-26 00:28:42] 2026-01-25 23:27:29,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 00:28:42] 2026-01-25 23:27:29,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 00:28:42] 2026-01-25 23:27:29,726 | INFO     | did not find any defunct processes belonging to 29402
[2026-01-26 00:28:42] 2026-01-25 23:27:29,729 | INFO     | did not find any defunct processes belonging to 29402
[2026-01-26 00:28:42] 2026-01-25 23:27:29,729 | INFO     | ready for new job
[2026-01-26 00:28:42] 2026-01-25 23:27:29,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 00:28:42] 2026-01-25 23:27:29,732 | INFO     | **************************************
[2026-01-26 00:28:42] 2026-01-25 23:27:29,732 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 00:28:42] 2026-01-25 23:27:29,732 | INFO     | **************************************
[2026-01-26 00:28:42] 2026-01-25 23:27:29,732 | INFO     | 
[2026-01-26 00:28:42] 2026-01-25 23:27:29,733 | INFO     | pilot is running in a VM
[2026-01-26 00:28:42] 2026-01-25 23:27:29,733 | INFO     | architecture information:
[2026-01-26 00:28:42] 2026-01-25 23:27:29,739 | INFO     | executing command: cat /etc/os-release
[2026-01-26 00:28:42] 2026-01-25 23:27:29,935 | INFO     | cat /etc/os-release:
[2026-01-26 00:28:42] NAME="CentOS Linux"
[2026-01-26 00:28:42] VERSION="7 (Core)"
[2026-01-26 00:28:42] ID="centos"
[2026-01-26 00:28:42] ID_LIKE="rhel fedora"
[2026-01-26 00:28:42] VERSION_ID="7"
[2026-01-26 00:28:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 00:28:42] ANSI_COLOR="0;31"
[2026-01-26 00:28:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 00:28:42] HOME_URL="https://www.centos.org/"
[2026-01-26 00:28:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 00:28:42] 
[2026-01-26 00:28:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 00:28:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 00:28:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 00:28:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 00:28:42] 
[2026-01-26 00:28:42] 2026-01-25 23:27:29,936 | INFO     | **************************************
[2026-01-26 00:28:42] 2026-01-25 23:27:30,439 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-26 00:28:42] 2026-01-25 23:27:30,750 | INFO     | sufficient remaining disk space (496447258624 B)
[2026-01-26 00:28:42] 2026-01-25 23:27:30,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 00:28:42] 2026-01-25 23:27:30,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 00:28:42] 2026-01-25 23:27:30,750 | INFO     | update_server=False
[2026-01-26 00:28:42] 2026-01-25 23:27:30,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 00:28:42] 2026-01-25 23:27:30,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 00:28:42] 2026-01-25 23:27:31,001 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 00:28:42] 2026-01-25 23:27:31,001 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 00:28:42] 2026-01-25 23:27:31,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 00:28:42] 2026-01-25 23:27:31,001 | INFO     | will abort loop
[2026-01-26 00:28:42] 2026-01-25 23:27:31,057 | INFO     | all payload control threads have been joined
[2026-01-26 00:28:42] 2026-01-25 23:27:31,405 | INFO     | all job control threads have been joined
[2026-01-26 00:28:42] 2026-01-25 23:27:31,735 | INFO     | all data control threads have been joined
[2026-01-26 00:28:42] 2026-01-25 23:27:31,756 | INFO     | [job] retrieve thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:31,800 | INFO     | [payload] failed_post thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:31,885 | INFO     | [data] copytool_in thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,007 | INFO     | [job] job monitor thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 00:28:42] 2026-01-25 23:27:32,063 | INFO     | [payload] control thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,216 | INFO     | [job] validate thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 00:28:42] 2026-01-25 23:27:32,364 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,411 | INFO     | [job] control thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,421 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,638 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,741 | INFO     | [data] control thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,872 | INFO     | [data] copytool_out thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:32,930 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:33,275 | INFO     | [payload] validate_post thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:33,336 | INFO     | [job] queue monitor thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:27:36,064 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 00:28:42] 2026-01-25 23:28:00,121 | INFO     | PID=24921 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 00:28:42] 2026-01-25 23:28:00,121 | INFO     | .. there are 9 such processes running
[2026-01-26 00:28:42] 2026-01-25 23:28:00,122 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 00:28:42] 2026-01-25 23:28:00,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 00:28:42] 2026-01-25 23:28:00,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 00:28:42] 2026-01-25 23:28:30,251 | INFO     | [monitor] cgroup control has ended
[2026-01-26 00:28:42] 2026-01-25 23:28:32,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765616539456)>', '<ExcThread(monitor, started 139765298992896)>']
[2026-01-26 00:28:42] 2026-01-25 23:28:32,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 00:28:42] 2026-01-25 23:28:32,315 | INFO     | [monitor] control thread has ended
[2026-01-26 00:28:42] 2026-01-25 23:28:37,336 | INFO     | all workflow threads have been joined
[2026-01-26 00:28:42] 2026-01-25 23:28:37,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 00:28:42] 2026-01-25 23:28:37,336 | INFO     | traces error code: 0
[2026-01-26 00:28:42] 2026-01-25 23:28:37,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 00:28:42] 2026-01-25 23:28:37,625 [wrapper] ==== pilot stdout END ====
[2026-01-26 00:28:42] 2026-01-25 23:28:37,658 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 00:28:42] 2026-01-25 23:28:37,692 [wrapper] pilotpid: 24921
[2026-01-26 00:28:42] 2026-01-25 23:28:37,726 [wrapper] Pilot exit status: 0
[2026-01-26 00:28:42] 2026-01-25 23:28:38,168 [wrapper] pandaids: 6982710744
[2026-01-26 00:28:42] 2026-01-25 23:28:39,284 [wrapper] cleanup supervisor_pilot  4537 24922
[2026-01-26 00:28:42] 2026-01-25 23:28:39,428 [wrapper] Test setup, not cleaning
[2026-01-26 00:28:42] 2026-01-25 23:28:39,525 [wrapper] apfmon messages muted
[2026-01-26 00:28:42] 2026-01-25 23:28:39,673 [wrapper] ==== wrapper stdout END ====
[2026-01-26 00:28:42] 2026-01-25 23:28:39,809 [wrapper] ==== wrapper stderr END ====
[2026-01-26 00:28:42]  *** Error codes and diagnostics ***
[2026-01-26 00:28:42]     "exeErrorCode": 0,
[2026-01-26 00:28:42]     "exeErrorDiag": "",
[2026-01-26 00:28:42]     "pilotErrorCode": 0,
[2026-01-26 00:28:42]     "pilotErrorDiag": "",
[2026-01-26 00:28:42]  *** Listing of results directory ***
[2026-01-26 00:28:42] total 667216
[2026-01-26 00:28:42] -rwx------. 1 boinc boinc     36322 Jan 25 07:28 runpilot2-wrapper.sh
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc    584422 Jan 25 07:30 pilot3.tar.gz
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc      5111 Jan 25 07:30 queuedata.json
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc       100 Jan 25 20:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 00:28:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 20:24 run_atlas
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc       105 Jan 25 20:24 job.xml
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc      6390 Jan 25 20:24 init_data.xml
[2026-01-26 00:28:42] -rw-r--r--. 2 boinc boinc 491407079 Jan 25 20:24 EVNT.48310721._000120.pool.root.1
[2026-01-26 00:28:42] -rw-r--r--. 2 boinc boinc     15845 Jan 25 20:24 start_atlas.sh
[2026-01-26 00:28:42] drwxrwx--x. 2 boinc boinc        68 Jan 25 20:24 shared
[2026-01-26 00:28:42] -rw-r--r--. 2 boinc boinc    597759 Jan 25 20:24 input.tar.gz
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc         0 Jan 25 20:24 boinc_lockfile
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc      2533 Jan 25 20:25 pandaJob.out
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc       415 Jan 25 20:30 workernode_map.json
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc   1004246 Jan 25 20:31 agis_schedconf.cvmfs.json
[2026-01-26 00:28:42] drwx------. 5 boinc boinc      4096 Jan 25 20:31 pilot3
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc 183035267 Jan 26 00:25 HITS.48310724._005961.pool.root.1
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc       531 Jan 26 00:26 boinc_task_state.xml
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc      1013 Jan 26 00:27 memory_monitor_summary.json
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc   1516246 Jan 26 00:27 agis_ddmendpoints.agis.ALL.json
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc    457198 Jan 26 00:27 log.48310724._005961.job.log.tgz.1
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc      6312 Jan 26 00:27 heartbeat.json
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc        95 Jan 26 00:28 pilot_heartbeat.json
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc      5066 Jan 26 00:28 pilotlog.txt
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc   1973009 Jan 26 00:28 log.48310724._005961.job.log.1
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc      8192 Jan 26 00:28 boinc_mmap_file
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc        28 Jan 26 00:28 wrapper_checkpoint.txt
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc       357 Jan 26 00:28 output.list
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc       620 Jan 26 00:28 runtime_log
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc   2447360 Jan 26 00:28 result.tar.gz
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc      8816 Jan 26 00:28 runtime_log.err
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc       655 Jan 26 00:28 0rsLDm4m838n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDM0KDmGQmCPn.diag
[2026-01-26 00:28:42] -rw-r--r--. 1 boinc boinc     20719 Jan 26 00:28 stderr.txt
[2026-01-26 00:28:42] HITS file was successfully produced:
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc 183035267 Jan 26 00:25 shared/HITS.pool.root.1
[2026-01-26 00:28:42]  *** Contents of shared directory: ***
[2026-01-26 00:28:42] total 661632
[2026-01-26 00:28:42] -rw-r--r--. 2 boinc boinc 491407079 Jan 25 20:24 ATLAS.root_0
[2026-01-26 00:28:42] -rw-r--r--. 2 boinc boinc     15845 Jan 25 20:24 start_atlas.sh
[2026-01-26 00:28:42] -rw-r--r--. 2 boinc boinc    597759 Jan 25 20:24 input.tar.gz
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc 183035267 Jan 26 00:25 HITS.pool.root.1
[2026-01-26 00:28:42] -rw-------. 1 boinc boinc   2447360 Jan 26 00:28 result.tar.gz
00:28:43 (20741): run_atlas exited; CPU time 54310.411054
00:28:43 (20741): called boinc_finish(0)

</stderr_txt>
]]>

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