Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:52:12 (1745392): wrapper (7.7.26015): starting
19:52:12 (1745392): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 19:52:12] Arguments: --nthreads 12
[2026-01-26 19:52:12] Threads: 12
[2026-01-26 19:52:12] Checking for CVMFS
[2026-01-26 19:52:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:52:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:52:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:52:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:52:13] 2.13.3.0 3819 4388 75520 155560 3 188 2945535 4096001 14460 130560 0 33175797 99.980 656442 360 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 19:52:13] CVMFS is ok
[2026-01-26 19:52:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:52:13] Checking for apptainer binary...
[2026-01-26 19:52:13] apptainer is not installed, using version from CVMFS
[2026-01-26 19:52:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:52:15] epyc7v12
[2026-01-26 19:52:15] apptainer works
[2026-01-26 19:52:15] Set ATHENA_PROC_NUMBER=12
[2026-01-26 19:52:15] Set ATHENA_CORE_NUMBER=12
[2026-01-26 19:52:15] Starting ATLAS job with PandaID=6982692220
[2026-01-26 19:52:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:37:13]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:37:13] 2026-01-26 21:36:30,894 | INFO     | extracted standard info from prmon json
[2026-01-26 21:37:13] 2026-01-26 21:36:30,894 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:37:13] 2026-01-26 21:36:30,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:37:13] 2026-01-26 21:36:30,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:37:13] 2026-01-26 21:36:30,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:37:13] 2026-01-26 21:36:30,901 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:37:13] 2026-01-26 21:36:30,901 | INFO     | sum of square deviations: 329031285.5
[2026-01-26 21:37:13] 2026-01-26 21:36:30,902 | INFO     | sum of deviations: 18095381416.999996
[2026-01-26 21:37:13] 2026-01-26 21:36:30,905 | INFO     | mean x: 1769460287.5
[2026-01-26 21:37:13] 2026-01-26 21:36:30,905 | INFO     | mean y: 2562463.68627451
[2026-01-26 21:37:13] 2026-01-26 21:36:30,905 | INFO     | intersect: -97310550956.18324
[2026-01-26 21:37:13] 2026-01-26 21:36:30,905 | INFO     | chi2: 2.8049942177955853
[2026-01-26 21:37:13] 2026-01-26 21:36:30,906 | INFO     | sum of square deviations: 282974608.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,906 | INFO     | sum of deviations: 24262340080.000004
[2026-01-26 21:37:13] 2026-01-26 21:36:30,906 | INFO     | mean x: 1769460135.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,907 | INFO     | mean y: 2581908.2989690723
[2026-01-26 21:37:13] 2026-01-26 21:36:30,907 | INFO     | intersect: -151711537803.00995
[2026-01-26 21:37:13] 2026-01-26 21:36:30,907 | INFO     | chi2: 1.979403841560292
[2026-01-26 21:37:13] 2026-01-26 21:36:30,907 | INFO     | current chi2=1.979403841560292 (change=29.432872659684694 %)
[2026-01-26 21:37:13] 2026-01-26 21:36:30,907 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,908 | INFO     | sum of deviations: 22877970151.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,909 | INFO     | mean x: 1769459982.5
[2026-01-26 21:37:13] 2026-01-26 21:36:30,909 | INFO     | mean y: 2576822.304347826
[2026-01-26 21:37:13] 2026-01-26 21:36:30,909 | INFO     | intersect: -167672163362.8683
[2026-01-26 21:37:13] 2026-01-26 21:36:30,909 | INFO     | chi2: 1.9793597656220585
[2026-01-26 21:37:13] 2026-01-26 21:36:30,910 | INFO     | current chi2=1.9793597656220585 (change=0.0022267279323186875 %)
[2026-01-26 21:37:13] 2026-01-26 21:36:30,910 | INFO     | right removable region: 91
[2026-01-26 21:37:13] 2026-01-26 21:36:30,910 | INFO     | sum of square deviations: 282974608.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,913 | INFO     | sum of deviations: -3253168673.999999
[2026-01-26 21:37:13] 2026-01-26 21:36:30,914 | INFO     | mean x: 1769460440.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,914 | INFO     | mean y: 2632219.680412371
[2026-01-26 21:37:13] 2026-01-26 21:36:30,914 | INFO     | intersect: 20344928349.975803
[2026-01-26 21:37:13] 2026-01-26 21:36:30,914 | INFO     | chi2: 0.938472991667323
[2026-01-26 21:37:13] 2026-01-26 21:36:30,914 | INFO     | current chi2=0.938472991667323 (change=66.54278337853906 %)
[2026-01-26 21:37:13] 2026-01-26 21:36:30,914 | INFO     | sum of square deviations: 241429643.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,915 | INFO     | sum of deviations: -6444637098.5
[2026-01-26 21:37:13] 2026-01-26 21:36:30,915 | INFO     | mean x: 1769460592.5
[2026-01-26 21:37:13] 2026-01-26 21:36:30,915 | INFO     | mean y: 2643622.815217391
[2026-01-26 21:37:13] 2026-01-26 21:36:30,915 | INFO     | intersect: 47235995903.25284
[2026-01-26 21:37:13] 2026-01-26 21:36:30,915 | INFO     | chi2: 0.8723027800678371
[2026-01-26 21:37:13] 2026-01-26 21:36:30,916 | INFO     | current chi2=0.8723027800678371 (change=7.050838136740156 %)
[2026-01-26 21:37:13] 2026-01-26 21:36:30,916 | INFO     | left removable region: 20
[2026-01-26 21:37:13] 2026-01-26 21:36:30,916 | INFO     | sum of square deviations: 110960220.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,917 | INFO     | sum of deviations: 445664841.0000001
[2026-01-26 21:37:13] 2026-01-26 21:36:30,917 | INFO     | mean x: 1769460562.0
[2026-01-26 21:37:13] 2026-01-26 21:36:30,917 | INFO     | mean y: 2667998.7746478873
[2026-01-26 21:37:13] 2026-01-26 21:36:30,918 | INFO     | intersect: -7104260592.566474
[2026-01-26 21:37:13] 2026-01-26 21:36:30,918 | INFO     | chi2: 0.0013837867212765983
[2026-01-26 21:37:13] 2026-01-26 21:36:30,918 | INFO     | current memory leak: 4.02 B/s (using 71 data points, chi2=0.00)
[2026-01-26 21:37:13] 2026-01-26 21:36:30,920 | INFO     | could have reported an average CPU frequency of 2397 MHz (7 samples)
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | ..............................
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . Timing measurements:
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . get job = 0 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . initial setup = 16 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . payload setup = 16 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . stage-in = 0 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . payload execution = 6189 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . stage-out = 1 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | . log creation = 0 s
[2026-01-26 21:37:13] 2026-01-26 21:36:30,921 | INFO     | ..............................
[2026-01-26 21:37:13] 2026-01-26 21:36:31,059 | INFO     | 
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | job summary report
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | --------------------------------------------------
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | PanDA job id: 6982692220
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | task id: 48310826
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | errors: (none)
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | pilot state: finished 
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | transexitcode: 0
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | exeerrorcode: 0
[2026-01-26 21:37:13] 2026-01-26 21:36:31,060 | INFO     | exeerrordiag: 
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | exitcode: 0
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | exitmsg: OK
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | cpuconsumptiontime: 43781 s
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | nevents: 400
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | neventsw: 0
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | pid: 1761766
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | pgrp: 1761766
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | corecount: 12
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | event service: False
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | sizes: {0: 2284268, 1: 2284268, 6209: 2311377, 6210: 2311376, 6211: 2320476, 6212: 2320854}
[2026-01-26 21:37:13] 2026-01-26 21:36:31,061 | INFO     | --------------------------------------------------
[2026-01-26 21:37:13] 2026-01-26 21:36:31,062 | INFO     | 
[2026-01-26 21:37:13] 2026-01-26 21:36:31,062 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/2
[2026-01-26 21:37:13] 2026-01-26 21:36:31,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,122 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:37:13] 2026-01-26 21:36:31,123 | INFO     | job 6982692220 has completed (purged errors)
[2026-01-26 21:37:13] 2026-01-26 21:36:31,123 | INFO     | overall cleanup function is called
[2026-01-26 21:37:13] 2026-01-26 21:36:32,140 | INFO     | --- collectZombieJob: --- 10, [1761766]
[2026-01-26 21:37:13] 2026-01-26 21:36:32,140 | INFO     | zombie collector waiting for pid 1761766
[2026-01-26 21:37:13] 2026-01-26 21:36:32,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:37:13] 2026-01-26 21:36:32,141 | INFO     | collected zombie processes
[2026-01-26 21:37:13] 2026-01-26 21:36:32,141 | INFO     | will attempt to kill all subprocesses of pid=1761766
[2026-01-26 21:37:13] 2026-01-26 21:36:33,221 | INFO     | process IDs to be killed: [1761766] (in reverse order)
[2026-01-26 21:37:13] 2026-01-26 21:36:33,692 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:37:13] 2026-01-26 21:36:33,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:37:13] 2026-01-26 21:36:33,733 | INFO     | did not find any defunct processes belonging to 1761766
[2026-01-26 21:37:13] 2026-01-26 21:36:33,766 | INFO     | did not find any defunct processes belonging to 1761766
[2026-01-26 21:37:13] 2026-01-26 21:36:33,766 | INFO     | ready for new job
[2026-01-26 21:37:13] 2026-01-26 21:36:33,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:37:13] 2026-01-26 21:36:33,777 | INFO     | **************************************
[2026-01-26 21:37:13] 2026-01-26 21:36:33,777 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:37:13] 2026-01-26 21:36:33,777 | INFO     | **************************************
[2026-01-26 21:37:13] 2026-01-26 21:36:33,777 | INFO     | 
[2026-01-26 21:37:13] 2026-01-26 21:36:33,805 | INFO     | architecture information:
[2026-01-26 21:37:13] 2026-01-26 21:36:33,810 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:37:13] 2026-01-26 21:36:33,856 | INFO     | cat /etc/os-release:
[2026-01-26 21:37:13] NAME="CentOS Linux"
[2026-01-26 21:37:13] VERSION="7 (Core)"
[2026-01-26 21:37:13] ID="centos"
[2026-01-26 21:37:13] ID_LIKE="rhel fedora"
[2026-01-26 21:37:13] VERSION_ID="7"
[2026-01-26 21:37:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:37:13] ANSI_COLOR="0;31"
[2026-01-26 21:37:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:37:13] HOME_URL="https://www.centos.org/"
[2026-01-26 21:37:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:37:13] 
[2026-01-26 21:37:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:37:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:37:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:37:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:37:13] 
[2026-01-26 21:37:13] 2026-01-26 21:36:33,857 | INFO     | **************************************
[2026-01-26 21:37:13] 2026-01-26 21:36:34,264 | WARNING  | process 1761766 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 21:37:13] 2026-01-26 21:36:34,359 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/2
[2026-01-26 21:37:13] 2026-01-26 21:36:34,406 | INFO     | sufficient remaining disk space (261598740480 B)
[2026-01-26 21:37:13] 2026-01-26 21:36:34,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:37:13] 2026-01-26 21:36:34,413 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:37:13] 2026-01-26 21:36:34,413 | INFO     | update_server=False
[2026-01-26 21:37:13] 2026-01-26 21:36:34,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:37:13] 2026-01-26 21:36:34,626 | INFO     | all payload control threads have been joined
[2026-01-26 21:37:13] 2026-01-26 21:36:34,811 | INFO     | all data control threads have been joined
[2026-01-26 21:37:13] 2026-01-26 21:36:34,881 | INFO     | all job control threads have been joined
[2026-01-26 21:37:13] 2026-01-26 21:36:34,980 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:37:13] 2026-01-26 21:36:35,418 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:35,555 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:35,633 | INFO     | [payload] control thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:35,688 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:35,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:37:13] 2026-01-26 21:36:35,802 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:35,816 | INFO     | [data] control thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:35,886 | INFO     | [job] control thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:36,050 | INFO     | number of running child processes to parent process 1761766: 1
[2026-01-26 21:37:13] 2026-01-26 21:36:36,051 | INFO     | maximum number of monitored processes: 6
[2026-01-26 21:37:13] 2026-01-26 21:36:36,051 | INFO     | aborting job monitoring since job object (job id=6982692220) has expired
[2026-01-26 21:37:13] 2026-01-26 21:36:36,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:37:13] 2026-01-26 21:36:36,051 | INFO     | will abort loop
[2026-01-26 21:37:13] 2026-01-26 21:36:36,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:37:13] 2026-01-26 21:36:36,153 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:36,359 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:36,761 | INFO     | [job] validate thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:36,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:37:13] 2026-01-26 21:36:36,859 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:36,997 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:37,060 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:37,078 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:37,762 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:36:40,853 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:37:13] 2026-01-26 21:37:05,127 | INFO     | PID=1753202 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 21:37:13] 2026-01-26 21:37:05,127 | INFO     | .. there are 18 such processes running
[2026-01-26 21:37:13] 2026-01-26 21:37:05,127 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:37:13] 2026-01-26 21:37:05,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:37:13] 2026-01-26 21:37:05,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:37:13] 2026-01-26 21:37:07,140 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:37:13] 2026-01-26 21:37:07,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130424530761536)>', '<ExcThread(monitor, started 130423996806912)>']
[2026-01-26 21:37:13] 2026-01-26 21:37:08,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:37:13] 2026-01-26 21:37:08,149 | INFO     | [monitor] control thread has ended
[2026-01-26 21:37:13] 2026-01-26 21:37:12,668 | INFO     | all workflow threads have been joined
[2026-01-26 21:37:13] 2026-01-26 21:37:12,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:37:13] 2026-01-26 21:37:12,669 | INFO     | traces error code: 0
[2026-01-26 21:37:13] 2026-01-26 21:37:12,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:37:13] 2026-01-26 21:37:13,014 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:37:13] 2026-01-26 21:37:13,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:37:13] 2026-01-26 21:37:13,033 [wrapper] pilotpid: 1753202
[2026-01-26 21:37:13] 2026-01-26 21:37:13,040 [wrapper] Pilot exit status: 0
[2026-01-26 21:37:13] 2026-01-26 21:37:13,071 [wrapper] pandaids: 6982692220
[2026-01-26 21:37:13] 2026-01-26 21:37:13,259 [wrapper] cleanup supervisor_pilot 1962677 1753203
[2026-01-26 21:37:13] 2026-01-26 21:37:13,268 [wrapper] Test setup, not cleaning
[2026-01-26 21:37:13] 2026-01-26 21:37:13,277 [wrapper] apfmon messages muted
[2026-01-26 21:37:13] 2026-01-26 21:37:13,286 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:37:13] 2026-01-26 21:37:13,294 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:37:13]  *** Error codes and diagnostics ***
[2026-01-26 21:37:13]     "exeErrorCode": 0,
[2026-01-26 21:37:13]     "exeErrorDiag": "",
[2026-01-26 21:37:13]     "pilotErrorCode": 0,
[2026-01-26 21:37:13]     "pilotErrorDiag": "",
[2026-01-26 21:37:13]  *** Listing of results directory ***
[2026-01-26 21:37:13] total 670488
[2026-01-26 21:37:13] -rwx------ 1 boinc boinc     36322 Jan 25 06:27 runpilot2-wrapper.sh
[2026-01-26 21:37:13] -rw-r--r-- 1 boinc boinc      5111 Jan 25 06:28 queuedata.json
[2026-01-26 21:37:13] -rw-r--r-- 1 boinc boinc    584422 Jan 25 06:28 pilot3.tar.gz
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc       100 Jan 26 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:37:13] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:52 run_atlas
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc       105 Jan 26 19:52 job.xml
[2026-01-26 21:37:13] -rw-r--r-- 2 boinc boinc 493280310 Jan 26 19:52 EVNT.48310824._000122.pool.root.1
[2026-01-26 21:37:13] drwxrwx--x 2 boinc boinc      4096 Jan 26 19:52 shared
[2026-01-26 21:37:13] -rw-r--r-- 2 boinc boinc    597764 Jan 26 19:52 input.tar.gz
[2026-01-26 21:37:13] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:52 start_atlas.sh
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc      7050 Jan 26 19:52 init_data.xml
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc         0 Jan 26 19:52 boinc_setup_complete
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc         0 Jan 26 19:52 boinc_lockfile
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc      2525 Jan 26 19:52 pandaJob.out
[2026-01-26 21:37:13] -rw------- 1 boinc boinc   1006449 Jan 26 19:52 agis_schedconf.cvmfs.json
[2026-01-26 21:37:13] -rw------- 1 boinc boinc   1516246 Jan 26 19:52 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:37:13] -rw------- 1 boinc boinc       419 Jan 26 19:52 workernode_map.json
[2026-01-26 21:37:13] drwx------ 5 boinc boinc      4096 Jan 26 19:52 pilot3
[2026-01-26 21:37:13] -rw------- 1 boinc boinc 186808146 Jan 26 21:35 HITS.48310826._010168.pool.root.1
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc       530 Jan 26 21:35 boinc_task_state.xml
[2026-01-26 21:37:13] -rw------- 1 boinc boinc      1025 Jan 26 21:36 memory_monitor_summary.json
[2026-01-26 21:37:13] -rw------- 1 boinc boinc    399800 Jan 26 21:36 log.48310826._010168.job.log.tgz.1
[2026-01-26 21:37:13] -rw------- 1 boinc boinc      6278 Jan 26 21:36 heartbeat.json
[2026-01-26 21:37:13] -rw------- 1 boinc boinc        95 Jan 26 21:36 pilot_heartbeat.json
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 21:37 boinc_mmap_file
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc        27 Jan 26 21:37 wrapper_checkpoint.txt
[2026-01-26 21:37:13] -rw------- 1 boinc boinc      5389 Jan 26 21:37 pilotlog.txt
[2026-01-26 21:37:13] -rw------- 1 boinc boinc    877402 Jan 26 21:37 log.48310826._010168.job.log.1
[2026-01-26 21:37:13] -rw------- 1 boinc boinc       357 Jan 26 21:37 output.list
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc       620 Jan 26 21:37 runtime_log
[2026-01-26 21:37:13] -rw------- 1 boinc boinc   1290240 Jan 26 21:37 result.tar.gz
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 21:37 runtime_log.err
[2026-01-26 21:37:13] -rw------- 1 boinc boinc       651 Jan 26 21:37 m66MDmTm838n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeJ0KDm8fNmln.diag
[2026-01-26 21:37:13] -rw-rw-r-- 1 boinc boinc     20854 Jan 26 21:37 stderr.txt
[2026-01-26 21:37:13] HITS file was successfully produced:
[2026-01-26 21:37:13] -rw------- 1 boinc boinc 186808146 Jan 26 21:35 shared/HITS.pool.root.1
[2026-01-26 21:37:13]  *** Contents of shared directory: ***
[2026-01-26 21:37:13] total 666020
[2026-01-26 21:37:13] -rw-r--r-- 2 boinc boinc 493280310 Jan 26 19:52 ATLAS.root_0
[2026-01-26 21:37:13] -rw-r--r-- 2 boinc boinc    597764 Jan 26 19:52 input.tar.gz
[2026-01-26 21:37:13] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:52 start_atlas.sh
[2026-01-26 21:37:13] -rw------- 1 boinc boinc 186808146 Jan 26 21:35 HITS.pool.root.1
[2026-01-26 21:37:13] -rw------- 1 boinc boinc   1290240 Jan 26 21:37 result.tar.gz
21:37:15 (1745392): run_atlas exited; CPU time 44131.851639
21:37:15 (1745392): called boinc_finish(0)

</stderr_txt>
]]>

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