Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:34:23 (1991861): wrapper (7.7.26015): starting
21:34:23 (1991861): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 21:34:23] Arguments: --nthreads 12
[2026-01-26 21:34:23] Threads: 12
[2026-01-26 21:34:23] Checking for CVMFS
[2026-01-26 21:34:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:34:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:34:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:34:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:34:24] 2.13.3.0 3819 4490 73376 155562 1 188 2956528 4096000 14571 130560 0 33983255 99.980 659274 360 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-26 21:34:24] CVMFS is ok
[2026-01-26 21:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:34:24] Checking for apptainer binary...
[2026-01-26 21:34:24] apptainer is not installed, using version from CVMFS
[2026-01-26 21:34:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:34:26] epyc7v12
[2026-01-26 21:34:26] apptainer works
[2026-01-26 21:34:26] Set ATHENA_PROC_NUMBER=12
[2026-01-26 21:34:26] Set ATHENA_CORE_NUMBER=12
[2026-01-26 21:34:26] Starting ATLAS job with PandaID=6982023019
[2026-01-26 21:34:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31421/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:15:26]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:15:26]  lfn=log.48310826._006652.job.log.tgz.1
[2026-01-26 23:15:26]  mtime=0
[2026-01-26 23:15:26]  protocol_id=None
[2026-01-26 23:15:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 23:15:26]  replicas=None
[2026-01-26 23:15:26]  scope=mc23_13p6TeV
[2026-01-26 23:15:26]  status=None
[2026-01-26 23:15:26]  status_code=0
[2026-01-26 23:15:26]  storage_token=
[2026-01-26 23:15:26]  surl=/opt/boinc/instance_homes/boinc_31421/slots/1/PanDA_Pilot-6982023019/log.48310826._006652.job.log.tgz.1
[2026-01-26 23:15:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/c0/log.48310826._006652.job.log.tgz.1
[2026-01-26 23:15:26]  workdir=None
[2026-01-26 23:15:26] ]
[2026-01-26 23:15:26] 2026-01-26 23:14:36,159 | INFO     | transferring file log.48310826._006652.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31421/slots/1/PanDA_Pilot-6982023019/log.48310826._006652.job.log.tgz.1 t
[2026-01-26 23:15:26] 2026-01-26 23:14:36,160 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31421/slots/1/PanDA_Pilot-6982023019/log.48310826._006652.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-26 23:15:26] 2026-01-26 23:14:36,204 | INFO     | adding to output.list: log.48310826._006652.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/c0/log.48310826._006652.job.log.tg
[2026-01-26 23:15:26] 2026-01-26 23:14:36,205 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 23:15:26] 2026-01-26 23:14:36,207 | INFO     | summary of transferred files:
[2026-01-26 23:15:26] 2026-01-26 23:14:36,207 | INFO     |  -- lfn=log.48310826._006652.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 23:15:26] 2026-01-26 23:14:36,207 | INFO     | stage-out finished correctly
[2026-01-26 23:15:26] 2026-01-26 23:14:37,000 | INFO     | monitor loop #397: job 0:6982023019 is in state 'finished'
[2026-01-26 23:15:26] 2026-01-26 23:14:37,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 23:15:26] 2026-01-26 23:14:37,533 | INFO     | time since job start (5968s) is within the limit (349056.0s)
[2026-01-26 23:15:26] 2026-01-26 23:14:39,503 | INFO     | monitor loop #398: job 0:6982023019 is in state 'finished'
[2026-01-26 23:15:26] 2026-01-26 23:14:39,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 23:15:26] 2026-01-26 23:14:39,538 | INFO     | time since job start (5970s) is within the limit (349056.0s)
[2026-01-26 23:15:26] 2026-01-26 23:14:39,633 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 23:15:26] 2026-01-26 23:14:41,543 | INFO     | time since job start (5972s) is within the limit (349056.0s)
[2026-01-26 23:15:26] 2026-01-26 23:14:41,979 | INFO     | job 6982023019 has state=finished
[2026-01-26 23:15:26] 2026-01-26 23:14:41,979 | INFO     | preparing for final server update for job 6982023019 in state='finished'
[2026-01-26 23:15:26] 2026-01-26 23:14:41,980 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31421/slots/1/PanDA_Pilot-6982023019/jobReport.json
[2026-01-26 23:15:26] 2026-01-26 23:14:41,985 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31421/slots/1/workernode_map.json
[2026-01-26 23:15:26] 2026-01-26 23:14:41,986 | INFO     | this job has now completed (state=finished)
[2026-01-26 23:15:26] 2026-01-26 23:14:41,986 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 23:15:26] 2026-01-26 23:14:41,986 | INFO     | log transfer has been attempted: DONE
[2026-01-26 23:15:26] 2026-01-26 23:14:41,986 | INFO     | job 6982023019 has finished - writing final server update
[2026-01-26 23:15:26] 2026-01-26 23:14:41,986 | INFO     | total number of processed events: 400 (read)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,008 | INFO     | monitor loop #399: job 0:6982023019 is in state 'finished'
[2026-01-26 23:15:26] 2026-01-26 23:14:42,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,040 | INFO     | using path: /opt/boinc/instance_homes/boinc_31421/slots/1/PanDA_Pilot-6982023019/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,041 | INFO     | extracted standard info from prmon json
[2026-01-26 23:15:26] 2026-01-26 23:14:42,041 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 23:15:26] 2026-01-26 23:14:42,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 23:15:26] 2026-01-26 23:14:42,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 23:15:26] 2026-01-26 23:14:42,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 23:15:26] 2026-01-26 23:14:42,049 | INFO     | fitting pss+swap vs Time
[2026-01-26 23:15:26] 2026-01-26 23:14:42,049 | INFO     | sum of square deviations: 233641590.0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,049 | INFO     | sum of deviations: 2909170703.0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,050 | INFO     | mean x: 1769466390.0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,050 | INFO     | mean y: 2656094.285714286
[2026-01-26 23:15:26] 2026-01-26 23:14:42,050 | INFO     | intersect: -22029721710.244602
[2026-01-26 23:15:26] 2026-01-26 23:14:42,050 | INFO     | chi2: 0.09909994149665503
[2026-01-26 23:15:26] 2026-01-26 23:14:42,050 | INFO     | current memory leak: 12.45 B/s (using 91 data points, chi2=0.10)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,051 | INFO     | could have reported an average CPU frequency of 2388 MHz (7 samples)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,051 | INFO     | ..............................
[2026-01-26 23:15:26] 2026-01-26 23:14:42,052 | INFO     | . Timing measurements:
[2026-01-26 23:15:26] 2026-01-26 23:14:42,052 | INFO     | . get job = 0 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,052 | INFO     | . initial setup = 16 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,052 | INFO     | . payload setup = 16 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,052 | INFO     | . stage-in = 0 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,052 | INFO     | . payload execution = 5943 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,053 | INFO     | . stage-out = 1 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,053 | INFO     | . log creation = 0 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,053 | INFO     | ..............................
[2026-01-26 23:15:26] 2026-01-26 23:14:42,178 | INFO     | 
[2026-01-26 23:15:26] 2026-01-26 23:14:42,178 | INFO     | job summary report
[2026-01-26 23:15:26] 2026-01-26 23:14:42,178 | INFO     | --------------------------------------------------
[2026-01-26 23:15:26] 2026-01-26 23:14:42,178 | INFO     | PanDA job id: 6982023019
[2026-01-26 23:15:26] 2026-01-26 23:14:42,178 | INFO     | task id: 48310826
[2026-01-26 23:15:26] 2026-01-26 23:14:42,178 | INFO     | errors: (none)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | pilot state: finished 
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | transexitcode: 0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | exeerrorcode: 0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | exeerrordiag: 
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | exitcode: 0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | exitmsg: OK
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | cpuconsumptiontime: 41583 s
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | nevents: 400
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | neventsw: 0
[2026-01-26 23:15:26] 2026-01-26 23:14:42,179 | INFO     | pid: 2004703
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | pgrp: 2004703
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | corecount: 12
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | event service: False
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | sizes: {0: 2283833, 1: 2284294, 5963: 2311290, 5964: 2311289, 5965: 2320389, 5969: 2320445, 5971: 2320767}
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | --------------------------------------------------
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | 
[2026-01-26 23:15:26] 2026-01-26 23:14:42,180 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31421/slots/1
[2026-01-26 23:15:26] 2026-01-26 23:14:42,233 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,234 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,236 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:15:26] 2026-01-26 23:14:42,239 | INFO     | job 6982023019 has completed (purged errors)
[2026-01-26 23:15:26] 2026-01-26 23:14:42,239 | INFO     | overall cleanup function is called
[2026-01-26 23:15:26] 2026-01-26 23:14:43,259 | INFO     | --- collectZombieJob: --- 10, [2004703]
[2026-01-26 23:15:26] 2026-01-26 23:14:43,259 | INFO     | zombie collector waiting for pid 2004703
[2026-01-26 23:15:26] 2026-01-26 23:14:43,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:15:26] 2026-01-26 23:14:43,260 | INFO     | collected zombie processes
[2026-01-26 23:15:26] 2026-01-26 23:14:43,260 | INFO     | will attempt to kill all subprocesses of pid=2004703
[2026-01-26 23:15:26] 2026-01-26 23:14:44,350 | INFO     | process IDs to be killed: [2004703] (in reverse order)
[2026-01-26 23:15:26] 2026-01-26 23:14:44,731 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:15:26] 2026-01-26 23:14:44,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:15:26] 2026-01-26 23:14:44,768 | INFO     | did not find any defunct processes belonging to 2004703
[2026-01-26 23:15:26] 2026-01-26 23:14:44,801 | INFO     | did not find any defunct processes belonging to 2004703
[2026-01-26 23:15:26] 2026-01-26 23:14:44,801 | INFO     | ready for new job
[2026-01-26 23:15:26] 2026-01-26 23:14:44,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:15:26] 2026-01-26 23:14:44,811 | INFO     | **************************************
[2026-01-26 23:15:26] 2026-01-26 23:14:44,811 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:15:26] 2026-01-26 23:14:44,811 | INFO     | **************************************
[2026-01-26 23:15:26] 2026-01-26 23:14:44,811 | INFO     | 
[2026-01-26 23:15:26] 2026-01-26 23:14:44,829 | INFO     | architecture information:
[2026-01-26 23:15:26] 2026-01-26 23:14:44,830 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:15:26] 2026-01-26 23:14:44,871 | INFO     | cat /etc/os-release:
[2026-01-26 23:15:26] NAME="CentOS Linux"
[2026-01-26 23:15:26] VERSION="7 (Core)"
[2026-01-26 23:15:26] ID="centos"
[2026-01-26 23:15:26] ID_LIKE="rhel fedora"
[2026-01-26 23:15:26] VERSION_ID="7"
[2026-01-26 23:15:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:15:26] ANSI_COLOR="0;31"
[2026-01-26 23:15:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:15:26] HOME_URL="https://www.centos.org/"
[2026-01-26 23:15:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:15:26] 
[2026-01-26 23:15:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:15:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:15:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:15:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:15:26] 
[2026-01-26 23:15:26] 2026-01-26 23:14:44,872 | INFO     | **************************************
[2026-01-26 23:15:26] 2026-01-26 23:14:45,374 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31421/slots/1
[2026-01-26 23:15:26] 2026-01-26 23:14:45,418 | INFO     | sufficient remaining disk space (260528144384 B)
[2026-01-26 23:15:26] 2026-01-26 23:14:45,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:15:26] 2026-01-26 23:14:45,419 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:15:26] 2026-01-26 23:14:45,419 | INFO     | update_server=False
[2026-01-26 23:15:26] 2026-01-26 23:14:45,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:15:26] 2026-01-26 23:14:45,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:15:26] 2026-01-26 23:14:45,460 | INFO     | all payload control threads have been joined
[2026-01-26 23:15:26] 2026-01-26 23:14:45,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:15:26] 2026-01-26 23:14:45,516 | INFO     | aborting loop
[2026-01-26 23:15:26] 2026-01-26 23:14:45,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:15:26] 2026-01-26 23:14:45,995 | INFO     | all data control threads have been joined
[2026-01-26 23:15:26] 2026-01-26 23:14:46,192 | INFO     | all job control threads have been joined
[2026-01-26 23:15:26] 2026-01-26 23:14:46,425 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:46,465 | INFO     | [payload] control thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:46,521 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:46,587 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:46,869 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:46,894 | INFO     | [job] validate thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:46,973 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:47,000 | INFO     | [data] control thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:47,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:15:26] 2026-01-26 23:14:47,197 | INFO     | [job] control thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:47,264 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:47,427 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:47,467 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:47,899 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:48,198 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:49,787 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:14:56,089 | INFO     | job.realtimelogging is not enabled
[2026-01-26 23:15:26] 2026-01-26 23:14:57,094 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:15:26] 2026-01-26 23:15:15,645 | INFO     | PID=1996047 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 23:15:26] 2026-01-26 23:15:15,647 | INFO     | .. there are 18 such processes running
[2026-01-26 23:15:26] 2026-01-26 23:15:15,647 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:15:26] 2026-01-26 23:15:15,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:15:26] 2026-01-26 23:15:15,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:15:26] 2026-01-26 23:15:18,847 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:15:26] 2026-01-26 23:15:20,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123423442752)>', '<ExcThread(monitor, started 140122863412992)>']
[2026-01-26 23:15:26] 2026-01-26 23:15:21,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:15:26] 2026-01-26 23:15:21,679 | INFO     | [monitor] control thread has ended
[2026-01-26 23:15:26] 2026-01-26 23:15:25,769 | INFO     | all workflow threads have been joined
[2026-01-26 23:15:26] 2026-01-26 23:15:25,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:15:26] 2026-01-26 23:15:25,770 | INFO     | traces error code: 0
[2026-01-26 23:15:26] 2026-01-26 23:15:25,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:15:26] 2026-01-26 23:15:26,008 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:15:26] 2026-01-26 23:15:26,018 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:15:26] 2026-01-26 23:15:26,027 [wrapper] pilotpid: 1996047
[2026-01-26 23:15:26] 2026-01-26 23:15:26,034 [wrapper] Pilot exit status: 0
[2026-01-26 23:15:26] 2026-01-26 23:15:26,069 [wrapper] pandaids: 6982023019
[2026-01-26 23:15:26] 2026-01-26 23:15:26,233 [wrapper] cleanup supervisor_pilot 2208526 1996048
[2026-01-26 23:15:26] 2026-01-26 23:15:26,243 [wrapper] Test setup, not cleaning
[2026-01-26 23:15:26] 2026-01-26 23:15:26,252 [wrapper] apfmon messages muted
[2026-01-26 23:15:26] 2026-01-26 23:15:26,260 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:15:26] 2026-01-26 23:15:26,268 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:15:26]  *** Error codes and diagnostics ***
[2026-01-26 23:15:26]     "exeErrorCode": 0,
[2026-01-26 23:15:26]     "exeErrorDiag": "",
[2026-01-26 23:15:26]     "pilotErrorCode": 0,
[2026-01-26 23:15:26]     "pilotErrorDiag": "",
[2026-01-26 23:15:26]  *** Listing of results directory ***
[2026-01-26 23:15:26] total 661148
[2026-01-26 23:15:26] -rw-r--r-- 1 boinc boinc    584422 Jan 25 00:25 pilot3.tar.gz
[2026-01-26 23:15:26] -rwx------ 1 boinc boinc     36322 Jan 25 00:28 runpilot2-wrapper.sh
[2026-01-26 23:15:26] -rw-r--r-- 1 boinc boinc      5111 Jan 25 00:30 queuedata.json
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc       100 Jan 26 21:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:15:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 21:34 run_atlas
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc       105 Jan 26 21:34 job.xml
[2026-01-26 23:15:26] -rw-r--r-- 2 boinc boinc 491568421 Jan 26 21:34 EVNT.48310824._000052.pool.root.1
[2026-01-26 23:15:26] -rw-r--r-- 2 boinc boinc     15845 Jan 26 21:34 start_atlas.sh
[2026-01-26 23:15:26] drwxrwx--x 2 boinc boinc      4096 Jan 26 21:34 shared
[2026-01-26 23:15:26] -rw-r--r-- 2 boinc boinc    597758 Jan 26 21:34 input.tar.gz
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc      6557 Jan 26 21:34 init_data.xml
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc         0 Jan 26 21:34 boinc_setup_complete
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc         0 Jan 26 21:34 boinc_lockfile
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc      2524 Jan 26 21:34 pandaJob.out
[2026-01-26 23:15:26] -rw------- 1 boinc boinc   1006433 Jan 26 21:34 agis_schedconf.cvmfs.json
[2026-01-26 23:15:26] -rw------- 1 boinc boinc   1516246 Jan 26 21:34 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:15:26] -rw------- 1 boinc boinc       420 Jan 26 21:35 workernode_map.json
[2026-01-26 23:15:26] drwx------ 5 boinc boinc      4096 Jan 26 21:35 pilot3
[2026-01-26 23:15:26] -rw------- 1 boinc boinc 178941253 Jan 26 23:13 HITS.48310826._006652.pool.root.1
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc       531 Jan 26 23:14 boinc_task_state.xml
[2026-01-26 23:15:26] -rw------- 1 boinc boinc        95 Jan 26 23:14 pilot_heartbeat.json
[2026-01-26 23:15:26] -rw------- 1 boinc boinc      1025 Jan 26 23:14 memory_monitor_summary.json
[2026-01-26 23:15:26] -rw------- 1 boinc boinc    435877 Jan 26 23:14 log.48310826._006652.job.log.tgz.1
[2026-01-26 23:15:26] -rw------- 1 boinc boinc      6280 Jan 26 23:14 heartbeat.json
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc      8192 Jan 26 23:15 boinc_mmap_file
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc        27 Jan 26 23:15 wrapper_checkpoint.txt
[2026-01-26 23:15:26] -rw------- 1 boinc boinc      4916 Jan 26 23:15 pilotlog.txt
[2026-01-26 23:15:26] -rw------- 1 boinc boinc    844100 Jan 26 23:15 log.48310826._006652.job.log.1
[2026-01-26 23:15:26] -rw------- 1 boinc boinc       357 Jan 26 23:15 output.list
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc       620 Jan 26 23:15 runtime_log
[2026-01-26 23:15:26] -rw------- 1 boinc boinc   1300480 Jan 26 23:15 result.tar.gz
[2026-01-26 23:15:26] -rw------- 1 boinc boinc       652 Jan 26 23:15 vZhLDmFA338n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgfzKDmLhWEIo.diag
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc      9166 Jan 26 23:15 runtime_log.err
[2026-01-26 23:15:26] -rw-rw-r-- 1 boinc boinc     21525 Jan 26 23:15 stderr.txt
[2026-01-26 23:15:26] HITS file was successfully produced:
[2026-01-26 23:15:26] -rw------- 1 boinc boinc 178941253 Jan 26 23:13 shared/HITS.pool.root.1
[2026-01-26 23:15:26]  *** Contents of shared directory: ***
[2026-01-26 23:15:26] total 656676
[2026-01-26 23:15:26] -rw-r--r-- 2 boinc boinc 491568421 Jan 26 21:34 ATLAS.root_0
[2026-01-26 23:15:26] -rw-r--r-- 2 boinc boinc     15845 Jan 26 21:34 start_atlas.sh
[2026-01-26 23:15:26] -rw-r--r-- 2 boinc boinc    597758 Jan 26 21:34 input.tar.gz
[2026-01-26 23:15:26] -rw------- 1 boinc boinc 178941253 Jan 26 23:13 HITS.pool.root.1
[2026-01-26 23:15:26] -rw------- 1 boinc boinc   1300480 Jan 26 23:15 result.tar.gz
23:15:28 (1991861): run_atlas exited; CPU time 41914.040765
23:15:28 (1991861): called boinc_finish(0)

</stderr_txt>
]]>

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