Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:26:13 (20939): wrapper (7.7.26015): starting
15:26:13 (20939): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 15:26:13] Arguments: --nthreads 8
[2026-01-25 15:26:13] Threads: 8
[2026-01-25 15:26:13] Checking for CVMFS
[2026-01-25 15:26:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 15:26:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 15:26:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 15:26:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 15:26:14] 2.11.2.0 9688 58555 129752 155511 0 275 15554998 25165824 890 130560 0 21369782 99.779 19267705 2928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 15:26:14] CVMFS is ok
[2026-01-25 15:26:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 15:26:14] Checking for apptainer binary...
[2026-01-25 15:26:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 15:26:14] Running /usr/bin/apptainer --version
[2026-01-25 15:26:14] apptainer version 1.3.2-1.el7
[2026-01-25 15:26:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 15:26:15] cg-vwn459.simple-grid.lan
[2026-01-25 15:26:15] apptainer works
[2026-01-25 15:26:15] Set ATHENA_PROC_NUMBER=8
[2026-01-25 15:26:15] Set ATHENA_CORE_NUMBER=8
[2026-01-25 15:26:15] Starting ATLAS job with PandaID=6982690973
[2026-01-25 15:26:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 19:01:11]  *** The last 200 lines of the pilot log: ***
[2026-01-25 19:01:11] 2026-01-25 18:00:11,219 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6982690973/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,220 | INFO     | extracted standard info from prmon json
[2026-01-25 19:01:11] 2026-01-25 18:00:11,220 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 19:01:11] 2026-01-25 18:00:11,220 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 19:01:11] 2026-01-25 18:00:11,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 19:01:11] 2026-01-25 18:00:11,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 19:01:11] 2026-01-25 18:00:11,225 | INFO     | fitting pss+swap vs Time
[2026-01-25 19:01:11] 2026-01-25 18:00:11,225 | INFO     | sum of square deviations: 2871616632.5
[2026-01-25 19:01:11] 2026-01-25 18:00:11,227 | INFO     | sum of deviations: 33570215735.500114
[2026-01-25 19:01:11] 2026-01-25 18:00:11,227 | INFO     | mean x: 1769357599.5
[2026-01-25 19:01:11] 2026-01-25 18:00:11,227 | INFO     | mean y: 2458780.919047619
[2026-01-25 19:01:11] 2026-01-25 18:00:11,227 | INFO     | intersect: -20681958371.50236
[2026-01-25 19:01:11] 2026-01-25 18:00:11,228 | INFO     | chi2: 5.153517456677994
[2026-01-25 19:01:11] 2026-01-25 18:00:11,228 | INFO     | sum of square deviations: 2671343110.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,230 | INFO     | sum of deviations: 46501724777.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,230 | INFO     | mean x: 1769357447.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,230 | INFO     | mean y: 2468423.882926829
[2026-01-25 19:01:11] 2026-01-25 18:00:11,230 | INFO     | intersect: -30797833014.1938
[2026-01-25 19:01:11] 2026-01-25 18:00:11,231 | INFO     | chi2: 4.428548963034714
[2026-01-25 19:01:11] 2026-01-25 18:00:11,231 | INFO     | current chi2=4.428548963034714 (change=14.067450042375546 %)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,231 | INFO     | right removable region: 204
[2026-01-25 19:01:11] 2026-01-25 18:00:11,231 | INFO     | sum of square deviations: 2671343110.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,233 | INFO     | sum of deviations: -30130253867.999996
[2026-01-25 19:01:11] 2026-01-25 18:00:11,233 | INFO     | mean x: 1769357752.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,233 | INFO     | mean y: 2507199.5658536586
[2026-01-25 19:01:11] 2026-01-25 18:00:11,233 | INFO     | intersect: 19959209149.0484
[2026-01-25 19:01:11] 2026-01-25 18:00:11,234 | INFO     | chi2: 1.4987189708483286
[2026-01-25 19:01:11] 2026-01-25 18:00:11,234 | INFO     | current chi2=1.4987189708483286 (change=70.91852344642261 %)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,234 | INFO     | sum of square deviations: 2480604650.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,239 | INFO     | sum of deviations: -47962140813.50001
[2026-01-25 19:01:11] 2026-01-25 18:00:11,239 | INFO     | mean x: 1769357904.5
[2026-01-25 19:01:11] 2026-01-25 18:00:11,239 | INFO     | mean y: 2521296.855
[2026-01-25 19:01:11] 2026-01-25 18:00:11,239 | INFO     | intersect: 34212806666.233913
[2026-01-25 19:01:11] 2026-01-25 18:00:11,240 | INFO     | chi2: 0.9709101041465823
[2026-01-25 19:01:11] 2026-01-25 18:00:11,240 | INFO     | current chi2=0.9709101041465823 (change=35.217334067839786 %)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,240 | INFO     | sum of square deviations: 2299168690.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,242 | INFO     | sum of deviations: -43892466734.999985
[2026-01-25 19:01:11] 2026-01-25 18:00:11,242 | INFO     | mean x: 1769358057.0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,242 | INFO     | mean y: 2517842.4974358976
[2026-01-25 19:01:11] 2026-01-25 18:00:11,242 | INFO     | intersect: 33780591629.32197
[2026-01-25 19:01:11] 2026-01-25 18:00:11,243 | INFO     | chi2: 0.9599491579615022
[2026-01-25 19:01:11] 2026-01-25 18:00:11,243 | INFO     | current chi2=0.9599491579615022 (change=1.128935226677312 %)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,243 | INFO     | left removable region: 30
[2026-01-25 19:01:11] 2026-01-25 18:00:11,243 | INFO     | sum of square deviations: 1633472487.5
[2026-01-25 19:01:11] 2026-01-25 18:00:11,244 | INFO     | sum of deviations: -10133238198.999998
[2026-01-25 19:01:11] 2026-01-25 18:00:11,245 | INFO     | mean x: 1769358331.5
[2026-01-25 19:01:11] 2026-01-25 18:00:11,245 | INFO     | mean y: 2510104.356321839
[2026-01-25 19:01:11] 2026-01-25 18:00:11,245 | INFO     | intersect: 10978715439.724545
[2026-01-25 19:01:11] 2026-01-25 18:00:11,245 | INFO     | chi2: 0.09741674972789116
[2026-01-25 19:01:11] 2026-01-25 18:00:11,245 | INFO     | current memory leak: -6.20 B/s (using 174 data points, chi2=0.10)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,246 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,246 | INFO     | ..............................
[2026-01-25 19:01:11] 2026-01-25 18:00:11,246 | INFO     | . Timing measurements:
[2026-01-25 19:01:11] 2026-01-25 18:00:11,246 | INFO     | . get job = 0 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,246 | INFO     | . initial setup = 7 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,247 | INFO     | . payload setup = 8 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,247 | INFO     | . stage-in = 0 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,247 | INFO     | . payload execution = 12783 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,247 | INFO     | . stage-out = 3 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,247 | INFO     | . log creation = 1 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,247 | INFO     | ..............................
[2026-01-25 19:01:11] 2026-01-25 18:00:11,466 | INFO     | 
[2026-01-25 19:01:11] 2026-01-25 18:00:11,466 | INFO     | job summary report
[2026-01-25 19:01:11] 2026-01-25 18:00:11,466 | INFO     | --------------------------------------------------
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | PanDA job id: 6982690973
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | task id: 48310826
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | errors: (none)
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | pilot state: finished 
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | transexitcode: 0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | exeerrorcode: 0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | exeerrordiag: 
[2026-01-25 19:01:11] 2026-01-25 18:00:11,467 | INFO     | exitcode: 0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | exitmsg: OK
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | cpuconsumptiontime: 48812 s
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | nevents: 400
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | neventsw: 0
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | pid: 29242
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | pgrp: 29242
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | corecount: 8
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | event service: False
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | sizes: {0: 2284035, 1: 2284269, 11: 2284269, 12796: 2314253, 12800: 2323251, 12802: 2323629}
[2026-01-25 19:01:11] 2026-01-25 18:00:11,468 | INFO     | --------------------------------------------------
[2026-01-25 19:01:11] 2026-01-25 18:00:11,469 | INFO     | 
[2026-01-25 19:01:11] 2026-01-25 18:00:11,469 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-25 19:01:11] 2026-01-25 18:00:11,815 | INFO     | time since job start (12814s) is within the limit (349056.0s)
[2026-01-25 19:01:11] 2026-01-25 18:00:12,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 19:01:11] 2026-01-25 18:00:12,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 19:01:11] 2026-01-25 18:00:12,018 | INFO     | job 6982690973 has completed (purged errors)
[2026-01-25 19:01:11] 2026-01-25 18:00:12,018 | INFO     | overall cleanup function is called
[2026-01-25 19:01:11] 2026-01-25 18:00:12,907 | INFO     | PID=24829 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 19:01:11] 2026-01-25 18:00:12,908 | INFO     | .. there are 2 such processes running
[2026-01-25 19:01:11] 2026-01-25 18:00:13,026 | INFO     | --- collectZombieJob: --- 10, [29242]
[2026-01-25 19:01:11] 2026-01-25 18:00:13,026 | INFO     | zombie collector waiting for pid 29242
[2026-01-25 19:01:11] 2026-01-25 18:00:13,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 19:01:11] 2026-01-25 18:00:13,027 | INFO     | collected zombie processes
[2026-01-25 19:01:11] 2026-01-25 18:00:13,027 | INFO     | will attempt to kill all subprocesses of pid=29242
[2026-01-25 19:01:11] 2026-01-25 18:00:13,108 | INFO     | process IDs to be killed: [29242] (in reverse order)
[2026-01-25 19:01:11] 2026-01-25 18:00:13,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 19:01:11] 2026-01-25 18:00:13,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 19:01:11] 2026-01-25 18:00:13,961 | INFO     | did not find any defunct processes belonging to 29242
[2026-01-25 19:01:11] 2026-01-25 18:00:13,962 | INFO     | did not find any defunct processes belonging to 29242
[2026-01-25 19:01:11] 2026-01-25 18:00:13,963 | INFO     | ready for new job
[2026-01-25 19:01:11] 2026-01-25 18:00:13,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 19:01:11] 2026-01-25 18:00:13,964 | INFO     | **************************************
[2026-01-25 19:01:11] 2026-01-25 18:00:13,965 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 19:01:11] 2026-01-25 18:00:13,965 | INFO     | **************************************
[2026-01-25 19:01:11] 2026-01-25 18:00:13,965 | INFO     | 
[2026-01-25 19:01:11] 2026-01-25 18:00:13,965 | INFO     | pilot is running in a VM
[2026-01-25 19:01:11] 2026-01-25 18:00:13,965 | INFO     | architecture information:
[2026-01-25 19:01:11] 2026-01-25 18:00:13,972 | INFO     | executing command: cat /etc/os-release
[2026-01-25 19:01:11] 2026-01-25 18:00:14,183 | INFO     | cat /etc/os-release:
[2026-01-25 19:01:11] NAME="CentOS Linux"
[2026-01-25 19:01:11] VERSION="7 (Core)"
[2026-01-25 19:01:11] ID="centos"
[2026-01-25 19:01:11] ID_LIKE="rhel fedora"
[2026-01-25 19:01:11] VERSION_ID="7"
[2026-01-25 19:01:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 19:01:11] ANSI_COLOR="0;31"
[2026-01-25 19:01:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 19:01:11] HOME_URL="https://www.centos.org/"
[2026-01-25 19:01:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 19:01:11] 
[2026-01-25 19:01:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 19:01:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 19:01:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 19:01:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 19:01:11] 
[2026-01-25 19:01:11] 2026-01-25 18:00:14,184 | INFO     | **************************************
[2026-01-25 19:01:11] 2026-01-25 18:00:14,690 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-25 19:01:11] 2026-01-25 18:00:14,976 | INFO     | sufficient remaining disk space (496394829824 B)
[2026-01-25 19:01:11] 2026-01-25 18:00:14,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 19:01:11] 2026-01-25 18:00:14,976 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 19:01:11] 2026-01-25 18:00:14,976 | INFO     | update_server=False
[2026-01-25 19:01:11] 2026-01-25 18:00:14,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 19:01:11] 2026-01-25 18:00:15,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 19:01:11] 2026-01-25 18:00:15,231 | INFO     | all data control threads have been joined
[2026-01-25 19:01:11] 2026-01-25 18:00:15,698 | INFO     | all job control threads have been joined
[2026-01-25 19:01:11] 2026-01-25 18:00:15,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 19:01:11] 2026-01-25 18:00:15,783 | INFO     | aborting loop
[2026-01-25 19:01:11] 2026-01-25 18:00:15,982 | INFO     | [job] retrieve thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,015 | INFO     | all payload control threads have been joined
[2026-01-25 19:01:11] 2026-01-25 18:00:16,195 | INFO     | [data] copytool_in thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,237 | INFO     | [data] control thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,347 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,396 | INFO     | [job] validate thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 19:01:11] 2026-01-25 18:00:16,450 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,498 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,704 | INFO     | [job] control thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,787 | INFO     | [payload] failed_post thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,789 | INFO     | [job] job monitor thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,856 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:16,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 19:01:11] 2026-01-25 18:00:17,021 | INFO     | [payload] control thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:17,188 | INFO     | [data] copytool_out thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:17,405 | INFO     | [payload] validate_post thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:17,413 | INFO     | [job] queue monitor thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:20,945 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 19:01:11] 2026-01-25 18:00:45,009 | INFO     | PID=24829 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 19:01:11] 2026-01-25 18:00:45,009 | INFO     | .. there are 2 such processes running
[2026-01-25 19:01:11] 2026-01-25 18:00:45,010 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 19:01:11] 2026-01-25 18:00:45,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 19:01:11] 2026-01-25 18:00:45,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 19:01:11] 2026-01-25 18:00:59,700 | INFO     | [monitor] cgroup control has ended
[2026-01-25 19:01:11] 2026-01-25 18:01:01,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193741256512)>', '<ExcThread(monitor, started 140193134786304)>']
[2026-01-25 19:01:11] 2026-01-25 18:01:02,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 19:01:11] 2026-01-25 18:01:02,112 | INFO     | [monitor] control thread has ended
[2026-01-25 19:01:11] 2026-01-25 18:01:06,155 | INFO     | all workflow threads have been joined
[2026-01-25 19:01:11] 2026-01-25 18:01:06,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 19:01:11] 2026-01-25 18:01:06,156 | INFO     | traces error code: 0
[2026-01-25 19:01:11] 2026-01-25 18:01:06,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 19:01:11] 2026-01-25 18:01:06,604 [wrapper] ==== pilot stdout END ====
[2026-01-25 19:01:11] 2026-01-25 18:01:06,716 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 19:01:11] 2026-01-25 18:01:06,820 [wrapper] pilotpid: 24829
[2026-01-25 19:01:11] 2026-01-25 18:01:06,921 [wrapper] Pilot exit status: 0
[2026-01-25 19:01:11] 2026-01-25 18:01:07,427 [wrapper] pandaids: 6982690973
[2026-01-25 19:01:11] 2026-01-25 18:01:08,521 [wrapper] cleanup supervisor_pilot  2777 24830
[2026-01-25 19:01:11] 2026-01-25 18:01:08,614 [wrapper] Test setup, not cleaning
[2026-01-25 19:01:11] 2026-01-25 18:01:08,693 [wrapper] apfmon messages muted
[2026-01-25 19:01:11] 2026-01-25 18:01:08,796 [wrapper] ==== wrapper stdout END ====
[2026-01-25 19:01:11] 2026-01-25 18:01:08,866 [wrapper] ==== wrapper stderr END ====
[2026-01-25 19:01:11]  *** Error codes and diagnostics ***
[2026-01-25 19:01:11]     "exeErrorCode": 0,
[2026-01-25 19:01:11]     "exeErrorDiag": "",
[2026-01-25 19:01:11]     "pilotErrorCode": 0,
[2026-01-25 19:01:11]     "pilotErrorDiag": "",
[2026-01-25 19:01:11]  *** Listing of results directory ***
[2026-01-25 19:01:11] total 674348
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc    584422 Jan 25 06:15 pilot3.tar.gz
[2026-01-25 19:01:11] -rwx------. 1 boinc boinc     36322 Jan 25 06:17 runpilot2-wrapper.sh
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc      5111 Jan 25 06:18 queuedata.json
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc       100 Jan 25 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 19:01:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 15:26 run_atlas
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc       105 Jan 25 15:26 job.xml
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc      6391 Jan 25 15:26 init_data.xml
[2026-01-25 19:01:11] -rw-r--r--. 2 boinc boinc 501586774 Jan 25 15:26 EVNT.48310824._000115.pool.root.1
[2026-01-25 19:01:11] -rw-r--r--. 2 boinc boinc     15845 Jan 25 15:26 start_atlas.sh
[2026-01-25 19:01:11] drwxrwx--x. 2 boinc boinc        68 Jan 25 15:26 shared
[2026-01-25 19:01:11] -rw-r--r--. 2 boinc boinc    597757 Jan 25 15:26 input.tar.gz
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc         0 Jan 25 15:26 boinc_lockfile
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc      2523 Jan 25 15:26 pandaJob.out
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc   1004246 Jan 25 15:26 agis_schedconf.cvmfs.json
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc       413 Jan 25 15:26 workernode_map.json
[2026-01-25 19:01:11] drwx------. 5 boinc boinc      4096 Jan 25 15:26 pilot3
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc 180503063 Jan 25 18:58 HITS.48310826._009834.pool.root.1
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc       531 Jan 25 18:58 boinc_task_state.xml
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc      1014 Jan 25 19:00 memory_monitor_summary.json
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc   1516246 Jan 25 19:00 agis_ddmendpoints.agis.ALL.json
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc    452067 Jan 25 19:00 log.48310826._009834.job.log.tgz.1
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc      6309 Jan 25 19:00 heartbeat.json
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc        95 Jan 25 19:00 pilot_heartbeat.json
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc        28 Jan 25 19:00 wrapper_checkpoint.txt
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc      8192 Jan 25 19:00 boinc_mmap_file
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc      4880 Jan 25 19:01 pilotlog.txt
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc   1806786 Jan 25 19:01 log.48310826._009834.job.log.1
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc       357 Jan 25 19:01 output.list
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc       620 Jan 25 19:01 runtime_log
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc   2273280 Jan 25 19:01 result.tar.gz
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc       654 Jan 25 19:01 vigKDm9f738n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0E0KDmBCCmNm.diag
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc      8816 Jan 25 19:01 runtime_log.err
[2026-01-25 19:01:11] -rw-r--r--. 1 boinc boinc     20796 Jan 25 19:01 stderr.txt
[2026-01-25 19:01:11] HITS file was successfully produced:
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc 180503063 Jan 25 18:58 shared/HITS.pool.root.1
[2026-01-25 19:01:11]  *** Contents of shared directory: ***
[2026-01-25 19:01:11] total 668928
[2026-01-25 19:01:11] -rw-r--r--. 2 boinc boinc 501586774 Jan 25 15:26 ATLAS.root_0
[2026-01-25 19:01:11] -rw-r--r--. 2 boinc boinc     15845 Jan 25 15:26 start_atlas.sh
[2026-01-25 19:01:11] -rw-r--r--. 2 boinc boinc    597757 Jan 25 15:26 input.tar.gz
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc 180503063 Jan 25 18:58 HITS.pool.root.1
[2026-01-25 19:01:11] -rw-------. 1 boinc boinc   2273280 Jan 25 19:01 result.tar.gz
19:01:13 (20939): run_atlas exited; CPU time 48925.994767
19:01:13 (20939): called boinc_finish(0)

</stderr_txt>
]]>

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