Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 10:34:18 (3216): vboxwrapper version 26210
2026-01-25 10:34:18 (3216): BOINC client version: 8.2.8
2026-01-25 10:34:19 (3216): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-01-25 10:34:19 (3216): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 10:34:19 (3216): Create VM. (boinc_4bda0b0a05622dfb, slot#3)
2026-01-25 10:34:19 (3216): Setting Memory Size for VM. (4500MB)
2026-01-25 10:34:19 (3216): Setting CPU Count for VM. (5)
2026-01-25 10:34:19 (3216): Setting Chipset Options for VM.
2026-01-25 10:34:19 (3216): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 10:34:19 (3216): Setting Boot Options for VM.
2026-01-25 10:34:19 (3216): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 10:34:19 (3216): Enabling VM Network Access.
2026-01-25 10:34:19 (3216): Disabling USB Support for VM.
2026-01-25 10:34:19 (3216): Disabling COM Port Support for VM.
2026-01-25 10:34:19 (3216): Disabling LPT Port Support for VM.
2026-01-25 10:34:19 (3216): Disabling Audio Support for VM.
2026-01-25 10:34:19 (3216): Disabling Clipboard Support for VM.
2026-01-25 10:34:19 (3216): Disabling Drag and Drop Support for VM.
2026-01-25 10:34:20 (3216): Adding storage controller(s) to VM.
2026-01-25 10:34:20 (3216): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 10:34:20 (3216): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 10:34:20 (3216): forwarding host port 57263 to guest port 80
2026-01-25 10:34:20 (3216): Enabling remote desktop for VM.
2026-01-25 10:34:20 (3216): Required extension pack not installed, remote desktop not enabled.
2026-01-25 10:34:20 (3216): Enabling shared directory for VM.
2026-01-25 10:34:20 (3216): Starting VM using VBoxManage interface. (boinc_4bda0b0a05622dfb, slot#3)
2026-01-25 10:34:22 (3216): Successfully started VM. (PID = '3690')
2026-01-25 10:34:22 (3216): Reporting VM Process ID to BOINC.
2026-01-25 10:34:22 (3216): Guest Log: BIOS: VirtualBox 7.0.16
2026-01-25 10:34:22 (3216): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 10:34:22 (3216): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-25 10:34:22 (3216): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 10:34:22 (3216): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 10:34:22 (3216): Detected: Web Application Enabled (http://localhost:57263)
2026-01-25 10:34:22 (3216): Preference change detected
2026-01-25 10:34:22 (3216): Setting CPU throttle for VM. (100%)
2026-01-25 10:34:22 (3216): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 10:34:24 (3216): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 10:34:24 (3216): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 10:34:27 (3216): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 10:34:27 (3216): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 10:34:27 (3216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 10:34:33 (3216): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 10:34:33 (3216): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-25 10:34:38 (3216): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000107 main     Log opened 2026-01-25T09:34:37.411537000Z
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000212 main     OS Product: Linux
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000237 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000246 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000247 main     Process ID: 1314
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000247 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 10:34:38 (3216): Guest Log: 00:00:00.000881 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 10:34:38 (3216): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 10:34:38 (3216): Guest Log: [INFO] Mounting shared directory
2026-01-25 10:34:38 (3216): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 10:34:45 (3216): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 10:34:45 (3216): Guest Log: [INFO] Detected branch: prod
2026-01-25 10:34:46 (3216): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 10:34:46 (3216): Guest Log: Copying input files
2026-01-25 10:34:47 (3216): Guest Log: Copied input files into RunAtlas.
2026-01-25 10:34:47 (3216): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 10:34:47 (3216): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 10:34:47 (3216): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 10:34:47 (3216): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 10:35:51 (3216): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 10:35:52 (3216): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 10:35:52 (3216): Guest Log: 2.6.3.0 1591 1 32188 155503 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 10:35:52 (3216): Guest Log: copied the webapp to /var/www
2026-01-25 10:35:52 (3216): Guest Log: ATHENA_PROC_NUMBER=5
2026-01-25 10:35:52 (3216): Guest Log: ATHENA_CORE_NUMBER=5
2026-01-25 10:35:52 (3216): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 10:35:52 (3216): Guest Log:  *** Starting ATLAS job. (PandaID=6982676802 taskID=48310826) ***
2026-01-25 12:04:38 (3216): VM state change detected. (old = 'running', new = 'paused')
2026-01-25 13:02:13 (3216): VM state change detected. (old = 'paused', new = 'running')
2026-01-25 13:02:18 (3216): Guest Log: 01:30:03.343564 timesync vgsvcTimeSyncWorker: Radical host time change: 3 464 135 000 000ns (HostNow=1 769 342 506 795 000 000 ns HostLast=1 769 339 042 660 000 000 ns)
2026-01-25 13:02:28 (3216): Guest Log: 01:30:13.344603 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 436 064 946 000ns (GuestNow=1 769 342 516 807 971 000 ns GuestLast=1 769 339 080 743 025 000 ns fSetTimeLastLoop=true )
2026-01-25 13:10:57 (3216): Status Report: Elapsed Time: '6000.000000'
2026-01-25 13:10:57 (3216): Status Report: CPU Time: '27594.690000'
2026-01-25 13:21:45 (3216): Guest Log:  *** Job finished ***
2026-01-25 13:21:45 (3216): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:20:11,852 | INFO     | [payload] run_realtimelog thread has finished
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:20:15,760 | INFO     | [data] queue_monitor thread has finished
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:06,028 | INFO     | [monitor] cgroup control has ended
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:07,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718278891328)>', '<ExcThread(monitor, started 140717984818944)>']
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:07,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:07,516 | INFO     | [monitor] control thread has ended
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,093 | INFO     | all workflow threads have been joined
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,094 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,094 | INFO     | traces error code: 0
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,186 [wrapper] ==== pilot stdout END ====
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,190 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,194 [wrapper] pilotpid: 6016
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,198 [wrapper] Pilot exit status: 0
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,329 [wrapper] pandaids: 6982676802
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,358 [wrapper] cleanup supervisor_pilot 25982 6017
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,362 [wrapper] Test setup, not cleaning
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,367 [wrapper] apfmon messages muted
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,371 [wrapper] ==== wrapper stdout END ====
2026-01-25 13:21:45 (3216): Guest Log: 2026-01-25 12:21:12,375 [wrapper] ==== wrapper stderr END ====
2026-01-25 13:21:45 (3216): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 13:21:45 (3216): Guest Log:     "exeErrorCode": 0,
2026-01-25 13:21:45 (3216): Guest Log:     "exeErrorDiag": "",
2026-01-25 13:21:45 (3216): Guest Log:     "pilotErrorCode": 0,
2026-01-25 13:21:45 (3216): Guest Log:     "pilotErrorDiag": "",
2026-01-25 13:21:45 (3216): Guest Log:  *** Listing of results directory ***
2026-01-25 13:21:45 (3216): Guest Log: total 181948
2026-01-25 13:21:45 (3216): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 05:14 runpilot2-wrapper.sh
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 05:15 queuedata.json
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 05:15 pilot3.tar.gz
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Jan 25 09:34 start_atlas.sh
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas    597759 Jan 25 09:34 input.tar.gz
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas      9135 Jan 25 09:34 init_data.xml
2026-01-25 13:21:45 (3216): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 09:34 EVNT.48310824._000104.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jan 25 09:35 pandaJob.out
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 25 09:36 agis_schedconf.cvmfs.json
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 09:36 agis_ddmendpoints.agis.ALL.json
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas       431 Jan 25 09:36 workernode_map.json
2026-01-25 13:21:45 (3216): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 09:36 pilot3
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas 180019392 Jan 25 12:19 HITS.48310826._009273.pool.root.1
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas        97 Jan 25 12:19 pilot_heartbeat.json
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas      1026 Jan 25 12:20 memory_monitor_summary.json
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas    300672 Jan 25 12:20 log.48310826._009273.job.log.tgz.1
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas      6342 Jan 25 12:20 heartbeat.json
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas      5195 Jan 25 12:21 pilotlog.txt
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas    911089 Jan 25 12:21 log.48310826._009273.job.log.1
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 12:21 output.list
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 12:21 runtime_log
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas   1228800 Jan 25 12:21 result.tar.gz
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 atlas atlas      8742 Jan 25 12:21 runtime_log.err
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas       650 Jan 25 12:21 PKvNDmFd738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnm6KDmQ85dVo.diag
2026-01-25 13:21:45 (3216): Guest Log: Looking for outputfile HITS.48310826._009273.pool.root.1
2026-01-25 13:21:45 (3216): Guest Log: HITS file was successfully produced
2026-01-25 13:21:45 (3216): Guest Log: -rw-------. 1 atlas atlas 180019392 Jan 25 12:19 /home/atlas/RunAtlas/HITS.48310826._009273.pool.root.1
2026-01-25 13:21:45 (3216): Guest Log: Successfully finished the ATLAS job!
2026-01-25 13:21:45 (3216): Guest Log: Copying the results back to the shared directory!
2026-01-25 13:21:45 (3216): Guest Log:  *** Contents of shared directory: ***
2026-01-25 13:21:45 (3216): Guest Log: total 486960
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 root root 496784192 Jan 25 09:34 ATLAS.root_0
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 root root      9135 Jan 25 09:34 init_data.xml
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 root root    597759 Jan 25 09:34 input.tar.gz
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 root root   1228800 Jan 25  2026 result.tar.gz
2026-01-25 13:21:45 (3216): Guest Log: -rw-r--r--. 1 root root     15845 Jan 25 09:34 start_atlas.sh
2026-01-25 13:21:45 (3216): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 13:21:45 (3216): VM Completion File Detected.
2026-01-25 13:21:45 (3216): Powering off VM.
2026-01-25 13:21:45 (3216): Successfully stopped VM.
2026-01-25 13:21:45 (3216): Deregistering VM. (boinc_4bda0b0a05622dfb, slot#3)
2026-01-25 13:21:45 (3216): Removing network bandwidth throttle group from VM.
2026-01-25 13:21:45 (3216): Removing VM from VirtualBox.
2026-01-25 13:21:50 (3216): called boinc_finish(0)

</stderr_txt>
]]>

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