Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 02:02:59 (16620): vboxwrapper version 26210
2026-01-25 02:02:59 (16620): BOINC client version: 8.2.8
2026-01-25 02:03:02 (16620): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2026-01-25 02:03:02 (16620): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 02:03:02 (16620): Create VM. (boinc_06b104e9325c05ee, slot#13)
2026-01-25 02:03:19 (16620): Setting Memory Size for VM. (4300MB)
2026-01-25 02:03:19 (16620): Setting CPU Count for VM. (3)
2026-01-25 02:03:20 (16620): Setting Chipset Options for VM.
2026-01-25 02:03:20 (16620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 02:03:20 (16620): Setting Boot Options for VM.
2026-01-25 02:03:21 (16620): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 02:03:21 (16620): Enabling VM Network Access.
2026-01-25 02:03:22 (16620): Disabling USB Support for VM.
2026-01-25 02:03:22 (16620): Disabling COM Port Support for VM.
2026-01-25 02:03:22 (16620): Disabling LPT Port Support for VM.
2026-01-25 02:03:23 (16620): Disabling Audio Support for VM.
2026-01-25 02:03:23 (16620): Disabling Clipboard Support for VM.
2026-01-25 02:03:23 (16620): Disabling Drag and Drop Support for VM.
2026-01-25 02:03:23 (16620): Adding storage controller(s) to VM.
2026-01-25 02:03:24 (16620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 02:03:26 (16620): Adding VirtualBox Guest Additions to VM.
2026-01-25 02:03:26 (16620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 02:03:27 (16620): forwarding host port 53763 to guest port 80
2026-01-25 02:03:27 (16620): Enabling remote desktop for VM.
2026-01-25 02:03:27 (16620): Enabling shared directory for VM.
2026-01-25 02:03:28 (16620): Starting VM using VBoxManage interface. (boinc_06b104e9325c05ee, slot#13)
2026-01-25 02:03:45 (16620): Successfully started VM. (PID = '14792')
2026-01-25 02:03:45 (16620): Reporting VM Process ID to BOINC.
2026-01-25 02:03:45 (16620): Guest Log: BIOS: VirtualBox 7.1.8
2026-01-25 02:03:45 (16620): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 02:03:45 (16620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-25 02:03:45 (16620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 02:03:45 (16620): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 02:03:45 (16620): Detected: Web Application Enabled (http://localhost:53763)
2026-01-25 02:03:45 (16620): Detected: Remote Desktop Enabled (localhost:53767)
2026-01-25 02:03:45 (16620): Preference change detected
2026-01-25 02:03:45 (16620): Setting CPU throttle for VM. (100%)
2026-01-25 02:03:45 (16620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 02:03:47 (16620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 02:03:47 (16620): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 02:03:51 (16620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 02:03:51 (16620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 02:03:51 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 02:03:52 (16620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 02:03:59 (16620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 02:03:59 (16620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-25 02:04:11 (16620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000295 main     Log opened 2026-01-25T02:04:10.345989000Z
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000552 main     OS Product: Linux
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000628 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000703 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000776 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000778 main     Process ID: 1296
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.000779 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 02:04:11 (16620): Guest Log: 00:00:00.002435 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 02:04:11 (16620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 02:04:11 (16620): Guest Log: [INFO] Mounting shared directory
2026-01-25 02:04:11 (16620): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 02:04:18 (16620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 02:04:18 (16620): Guest Log: [INFO] Detected branch: prod
2026-01-25 02:04:18 (16620): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 02:04:20 (16620): Guest Log: Copying input files
2026-01-25 02:04:21 (16620): Guest Log: 00:00:10.005330 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 102 577 000ns (GuestNow=1 769 335 461 453 276 000 ns GuestLast=1 769 306 650 350 699 000 ns fSetTimeLastLoop=true )
2026-01-25 02:04:26 (16620): Guest Log: Copied input files into RunAtlas.
2026-01-25 02:04:26 (16620): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 02:04:26 (16620): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 02:04:26 (16620): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 02:04:26 (16620): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 02:04:36 (16620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 02:04:37 (16620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 02:04:37 (16620): Guest Log: 2.6.3.0 1576 0 32212 155503 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 02:04:38 (16620): Guest Log: copied the webapp to /var/www
2026-01-25 02:04:38 (16620): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-25 02:04:38 (16620): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-25 02:04:38 (16620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 02:04:38 (16620): Guest Log:  *** Starting ATLAS job. (PandaID=6982676800 taskID=48310826) ***
2026-01-25 04:00:22 (16620): Status Report: Elapsed Time: '6000.744411'
2026-01-25 04:00:23 (16620): Status Report: CPU Time: '18777.218750'
2026-01-25 06:00:52 (16620): Status Report: Elapsed Time: '12001.708229'
2026-01-25 06:00:52 (16620): Status Report: CPU Time: '40027.375000'
2026-01-25 08:00:45 (16620): Status Report: Elapsed Time: '18008.311066'
2026-01-25 08:00:45 (16620): Status Report: CPU Time: '61158.656250'
2026-01-25 09:58:16 (16620): Status Report: Elapsed Time: '24009.189466'
2026-01-25 09:58:16 (16620): Status Report: CPU Time: '81835.390625'
2026-01-25 11:09:38 (16620): Guest Log:  *** Job finished ***
2026-01-25 11:09:38 (16620): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:08:59,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:08:59,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:26,214 | INFO     | [monitor] cgroup control has ended
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:28,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728324892480)>', '<ExcThread(monitor, started 139727357339392)>']
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:28,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:28,966 | INFO     | [monitor] control thread has ended
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,201 | INFO     | all workflow threads have been joined
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,202 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,202 | INFO     | traces error code: 0
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,357 [wrapper] ==== pilot stdout END ====
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,364 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,371 [wrapper] pilotpid: 5969
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,379 [wrapper] Pilot exit status: 0
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,547 [wrapper] pandaids: 6982676800
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,611 [wrapper] cleanup supervisor_pilot  1597 5970
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,620 [wrapper] Test setup, not cleaning
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,630 [wrapper] apfmon messages muted
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,640 [wrapper] ==== wrapper stdout END ====
2026-01-25 11:09:38 (16620): Guest Log: 2026-01-25 19:09:33,649 [wrapper] ==== wrapper stderr END ====
2026-01-25 11:09:38 (16620): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 11:09:38 (16620): Guest Log:     "exeErrorCode": 0,
2026-01-25 11:09:38 (16620): Guest Log:     "exeErrorDiag": "",
2026-01-25 11:09:38 (16620): Guest Log:     "pilotErrorCode": 0,
2026-01-25 11:09:38 (16620): Guest Log:     "pilotErrorDiag": "",
2026-01-25 11:09:38 (16620): Guest Log:  *** Listing of results directory ***
2026-01-25 11:09:38 (16620): Guest Log: total 182520
2026-01-25 11:09:38 (16620): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 25 05:14 runpilot2-wrapper.sh
2026-01-25 11:09:38 (16620): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 25 05:15 queuedata.json
2026-01-25 11:09:38 (16620): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 25 05:15 pilot3.tar.gz
2026-01-25 11:09:38 (16620): Guest Log: -rwxr-xr-x. 1 atlas atlas      8516 Jan 25 10:04 init_data.xml
2026-01-25 11:09:38 (16620): Guest Log: -rwxr-xr-x. 1 atlas atlas    597761 Jan 25 10:04 input.tar.gz
2026-01-25 11:09:38 (16620): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 10:04 start_atlas.sh
2026-01-25 11:09:38 (16620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 10:04 EVNT.48310824._000104.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 11:09:38 (16620): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Jan 25 10:04 pandaJob.out
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 25 10:05 agis_schedconf.cvmfs.json
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas       422 Jan 25 10:05 workernode_map.json
2026-01-25 11:09:38 (16620): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 10:05 pilot3
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas 172842329 Jan 25 19:07 HITS.48310826._009271.pool.root.1
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas      1043 Jan 25 19:08 memory_monitor_summary.json
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 19:08 agis_ddmendpoints.agis.ALL.json
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas    630563 Jan 25 19:08 log.48310826._009271.job.log.tgz.1
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas      6329 Jan 25 19:08 heartbeat.json
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas        95 Jan 25 19:08 pilot_heartbeat.json
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas      4873 Jan 25 19:09 pilotlog.txt
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas   4465160 Jan 25 19:09 log.48310826._009271.job.log.1
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 19:09 output.list
2026-01-25 11:09:38 (16620): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 19:09 runtime_log
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas   5109760 Jan 25 19:09 result.tar.gz
2026-01-25 11:09:38 (16620): Guest Log: -rw-r--r--. 1 atlas atlas      8727 Jan 25 19:09 runtime_log.err
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas       654 Jan 25 19:09 gmtNDmFd738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmm6KDmtjTFJo.diag
2026-01-25 11:09:38 (16620): Guest Log: Looking for outputfile HITS.48310826._009271.pool.root.1
2026-01-25 11:09:38 (16620): Guest Log: HITS file was successfully produced
2026-01-25 11:09:38 (16620): Guest Log: -rw-------. 1 atlas atlas 172842329 Jan 25 19:07 /home/atlas/RunAtlas/HITS.48310826._009271.pool.root.1
2026-01-25 11:09:40 (16620): Guest Log: Successfully finished the ATLAS job!
2026-01-25 11:09:40 (16620): Guest Log: Copying the results back to the shared directory!
2026-01-25 11:09:40 (16620): Guest Log:  *** Contents of shared directory: ***
2026-01-25 11:09:40 (16620): Guest Log: total 659540
2026-01-25 11:09:40 (16620): Guest Log: -rwxrwxrwx. 1 root root 496784192 Jan 25 10:02 ATLAS.root_0
2026-01-25 11:09:40 (16620): Guest Log: -rwxrwxrwx. 1 root root 172842329 Jan 25 19:09 HITS.pool.root.1
2026-01-25 11:09:40 (16620): Guest Log: -rwxrwxrwx. 1 root root      8516 Jan 25 10:02 init_data.xml
2026-01-25 11:09:40 (16620): Guest Log: -rwxrwxrwx. 1 root root    597761 Jan 25 09:33 input.tar.gz
2026-01-25 11:09:40 (16620): Guest Log: -rwxrwxrwx. 1 root root   5109760 Jan 25 19:09 result.tar.gz
2026-01-25 11:09:40 (16620): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 09:33 start_atlas.sh
2026-01-25 11:09:40 (16620): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 11:09:40 (16620): VM Completion File Detected.
2026-01-25 11:09:40 (16620): Powering off VM.
2026-01-25 11:09:41 (16620): Successfully stopped VM.
2026-01-25 11:09:41 (16620): Deregistering VM. (boinc_06b104e9325c05ee, slot#13)
2026-01-25 11:09:41 (16620): Removing network bandwidth throttle group from VM.
2026-01-25 11:09:41 (16620): Removing VM from VirtualBox.
2026-01-25 11:09:46 (16620): called boinc_finish(0)

</stderr_txt>
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