Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:09:39 (27326): wrapper (7.7.26015): starting
18:09:39 (27326): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 18:09:39] Arguments: --nthreads 8
[2026-01-25 18:09:39] Threads: 8
[2026-01-25 18:09:39] Checking for CVMFS
[2026-01-25 18:09:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 18:09:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 18:09:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 18:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 18:09:42] 2.11.2.0 26158 58736 132100 155515 2 55 14682836 25165825 899 130560 0 12294706 99.692 16376078 2192 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 18:09:42] CVMFS is ok
[2026-01-25 18:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 18:09:42] Checking for apptainer binary...
[2026-01-25 18:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 18:09:42] Running /usr/bin/apptainer --version
[2026-01-25 18:09:42] apptainer version 1.3.2-1.el7
[2026-01-25 18:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 18:09:48] cg-vwn378.simple-grid.lan
[2026-01-25 18:09:48] apptainer works
[2026-01-25 18:09:48] Set ATHENA_PROC_NUMBER=8
[2026-01-25 18:09:48] Set ATHENA_CORE_NUMBER=8
[2026-01-25 18:09:48] Starting ATLAS job with PandaID=6982676776
[2026-01-25 18:09:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 22:16:09]  *** The last 200 lines of the pilot log: ***
[2026-01-25 22:16:09] 2026-01-25 21:14:57,787 | INFO     | job 6982676776 has finished - writing final server update
[2026-01-25 22:16:09] 2026-01-25 21:14:57,787 | INFO     | total number of processed events: 400 (read)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,789 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6982676776/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,790 | INFO     | extracted standard info from prmon json
[2026-01-25 22:16:09] 2026-01-25 21:14:57,790 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 22:16:09] 2026-01-25 21:14:57,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 22:16:09] 2026-01-25 21:14:57,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 22:16:09] 2026-01-25 21:14:57,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 22:16:09] 2026-01-25 21:14:57,796 | INFO     | fitting pss+swap vs Time
[2026-01-25 22:16:09] 2026-01-25 21:14:57,796 | INFO     | sum of square deviations: 3772712597.5
[2026-01-25 22:16:09] 2026-01-25 21:14:57,798 | INFO     | sum of deviations: 81385075708.99994
[2026-01-25 22:16:09] 2026-01-25 21:14:57,799 | INFO     | mean x: 1769368683.5
[2026-01-25 22:16:09] 2026-01-25 21:14:57,799 | INFO     | mean y: 2440483.5739130434
[2026-01-25 22:16:09] 2026-01-25 21:14:57,799 | INFO     | intersect: -38166436827.46304
[2026-01-25 22:16:09] 2026-01-25 21:14:57,799 | INFO     | chi2: 9.292066757967003
[2026-01-25 22:16:09] 2026-01-25 21:14:57,800 | INFO     | sum of square deviations: 3531973200.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,802 | INFO     | sum of deviations: 94789209121.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,802 | INFO     | mean x: 1769368531.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,802 | INFO     | mean y: 2448805.7066666665
[2026-01-25 22:16:09] 2026-01-25 21:14:57,802 | INFO     | intersect: -47482918211.53899
[2026-01-25 22:16:09] 2026-01-25 21:14:57,803 | INFO     | chi2: 8.619147911136949
[2026-01-25 22:16:09] 2026-01-25 21:14:57,803 | INFO     | current chi2=8.619147911136949 (change=7.241864101472309 %)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,803 | INFO     | right removable region: 224
[2026-01-25 22:16:09] 2026-01-25 21:14:57,803 | INFO     | sum of square deviations: 3531973200.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,809 | INFO     | sum of deviations: -278553693.9999981
[2026-01-25 22:16:09] 2026-01-25 21:14:57,810 | INFO     | mean x: 1769368836.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,810 | INFO     | mean y: 2492188.8533333335
[2026-01-25 22:16:09] 2026-01-25 21:14:57,810 | INFO     | intersect: 142035780.3268691
[2026-01-25 22:16:09] 2026-01-25 21:14:57,810 | INFO     | chi2: 3.9268727729757167
[2026-01-25 22:16:09] 2026-01-25 21:14:57,810 | INFO     | current chi2=3.9268727729757167 (change=57.73951183025217 %)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,811 | INFO     | sum of square deviations: 3301699115.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,813 | INFO     | sum of deviations: -61226177904.50001
[2026-01-25 22:16:09] 2026-01-25 21:14:57,813 | INFO     | mean x: 1769368988.5
[2026-01-25 22:16:09] 2026-01-25 21:14:57,813 | INFO     | mean y: 2532497.3045454547
[2026-01-25 22:16:09] 2026-01-25 21:14:57,813 | INFO     | intersect: 32813426735.499302
[2026-01-25 22:16:09] 2026-01-25 21:14:57,814 | INFO     | chi2: 1.1320417212123093
[2026-01-25 22:16:09] 2026-01-25 21:14:57,814 | INFO     | current chi2=1.1320417212123093 (change=71.17192772317735 %)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,814 | INFO     | sum of square deviations: 3081657780.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,816 | INFO     | sum of deviations: -69941271420.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,816 | INFO     | mean x: 1769369141.0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,816 | INFO     | mean y: 2538474.2744186046
[2026-01-25 22:16:09] 2026-01-25 21:14:57,816 | INFO     | intersect: 40160121232.49141
[2026-01-25 22:16:09] 2026-01-25 21:14:57,817 | INFO     | chi2: 0.9976665754673406
[2026-01-25 22:16:09] 2026-01-25 21:14:57,817 | INFO     | current chi2=0.9976665754673406 (change=11.870158424997413 %)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,817 | INFO     | left removable region: 30
[2026-01-25 22:16:09] 2026-01-25 21:14:57,818 | INFO     | sum of square deviations: 2263977332.5
[2026-01-25 22:16:09] 2026-01-25 21:14:57,819 | INFO     | sum of deviations: -34778093937.5
[2026-01-25 22:16:09] 2026-01-25 21:14:57,819 | INFO     | mean x: 1769369415.5
[2026-01-25 22:16:09] 2026-01-25 21:14:57,819 | INFO     | mean y: 2534423.3865979384
[2026-01-25 22:16:09] 2026-01-25 21:14:57,819 | INFO     | intersect: 27182707501.554314
[2026-01-25 22:16:09] 2026-01-25 21:14:57,820 | INFO     | chi2: 0.18293212922434157
[2026-01-25 22:16:09] 2026-01-25 21:14:57,820 | INFO     | current memory leak: -15.36 B/s (using 194 data points, chi2=0.18)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | ..............................
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | . Timing measurements:
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | . get job = 0 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | . initial setup = 120 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | . payload setup = 151 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,821 | INFO     | . stage-in = 0 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,822 | INFO     | . payload execution = 14128 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,822 | INFO     | . stage-out = 3 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,822 | INFO     | . log creation = 1 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,822 | INFO     | ..............................
[2026-01-25 22:16:09] 2026-01-25 21:14:57,946 | INFO     | 
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | job summary report
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | --------------------------------------------------
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | PanDA job id: 6982676776
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | task id: 48310826
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | errors: (none)
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | pilot state: finished 
[2026-01-25 22:16:09] 2026-01-25 21:14:57,947 | INFO     | transexitcode: 0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | exeerrorcode: 0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | exeerrordiag: 
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | exitcode: 0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | exitmsg: OK
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | cpuconsumptiontime: 52651 s
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | nevents: 400
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | neventsw: 0
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | pid: 3368
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | pgrp: 3368
[2026-01-25 22:16:09] 2026-01-25 21:14:57,948 | INFO     | corecount: 8
[2026-01-25 22:16:09] 2026-01-25 21:14:57,949 | INFO     | event service: False
[2026-01-25 22:16:09] 2026-01-25 21:14:57,949 | INFO     | sizes: {0: 2283153, 1: 2283839, 2: 2284300, 3: 2284300, 13: 2284300, 14284: 2314906, 14285: 2315033, 14289: 2324089, 14291: 2324145, 14292: 2324339}
[2026-01-25 22:16:09] 2026-01-25 21:14:57,949 | INFO     | --------------------------------------------------
[2026-01-25 22:16:09] 2026-01-25 21:14:57,949 | INFO     | 
[2026-01-25 22:16:09] 2026-01-25 21:14:57,949 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-25 22:16:09] 2026-01-25 21:14:58,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,308 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,308 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,308 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | job 6982676776 has completed (purged errors)
[2026-01-25 22:16:09] 2026-01-25 21:14:58,310 | INFO     | overall cleanup function is called
[2026-01-25 22:16:09] 2026-01-25 21:14:59,319 | INFO     | --- collectZombieJob: --- 10, [3368]
[2026-01-25 22:16:09] 2026-01-25 21:14:59,319 | INFO     | zombie collector waiting for pid 3368
[2026-01-25 22:16:09] 2026-01-25 21:14:59,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 22:16:09] 2026-01-25 21:14:59,320 | INFO     | collected zombie processes
[2026-01-25 22:16:09] 2026-01-25 21:14:59,320 | INFO     | will attempt to kill all subprocesses of pid=3368
[2026-01-25 22:16:09] 2026-01-25 21:14:59,407 | INFO     | process IDs to be killed: [3368] (in reverse order)
[2026-01-25 22:16:09] 2026-01-25 21:15:00,213 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 22:16:09] 2026-01-25 21:15:00,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 22:16:09] 2026-01-25 21:15:00,215 | INFO     | did not find any defunct processes belonging to 3368
[2026-01-25 22:16:09] 2026-01-25 21:15:00,216 | INFO     | did not find any defunct processes belonging to 3368
[2026-01-25 22:16:09] 2026-01-25 21:15:00,217 | INFO     | ready for new job
[2026-01-25 22:16:09] 2026-01-25 21:15:00,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 22:16:09] 2026-01-25 21:15:00,219 | INFO     | **************************************
[2026-01-25 22:16:09] 2026-01-25 21:15:00,219 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 22:16:09] 2026-01-25 21:15:00,219 | INFO     | **************************************
[2026-01-25 22:16:09] 2026-01-25 21:15:00,219 | INFO     | 
[2026-01-25 22:16:09] 2026-01-25 21:15:00,220 | INFO     | pilot is running in a VM
[2026-01-25 22:16:09] 2026-01-25 21:15:00,220 | INFO     | architecture information:
[2026-01-25 22:16:09] 2026-01-25 21:15:00,231 | INFO     | executing command: cat /etc/os-release
[2026-01-25 22:16:09] 2026-01-25 21:15:00,537 | INFO     | cat /etc/os-release:
[2026-01-25 22:16:09] NAME="CentOS Linux"
[2026-01-25 22:16:09] VERSION="7 (Core)"
[2026-01-25 22:16:09] ID="centos"
[2026-01-25 22:16:09] ID_LIKE="rhel fedora"
[2026-01-25 22:16:09] VERSION_ID="7"
[2026-01-25 22:16:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 22:16:09] ANSI_COLOR="0;31"
[2026-01-25 22:16:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 22:16:09] HOME_URL="https://www.centos.org/"
[2026-01-25 22:16:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 22:16:09] 
[2026-01-25 22:16:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 22:16:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 22:16:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 22:16:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 22:16:09] 
[2026-01-25 22:16:09] 2026-01-25 21:15:00,537 | INFO     | **************************************
[2026-01-25 22:16:09] 2026-01-25 21:15:01,040 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-25 22:16:09] 2026-01-25 21:15:01,373 | INFO     | sufficient remaining disk space (496062431232 B)
[2026-01-25 22:16:09] 2026-01-25 21:15:01,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 22:16:09] 2026-01-25 21:15:01,373 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 22:16:09] 2026-01-25 21:15:01,374 | INFO     | update_server=False
[2026-01-25 22:16:09] 2026-01-25 21:15:01,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 22:16:09] 2026-01-25 21:15:01,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 22:16:09] 2026-01-25 21:15:01,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 22:16:09] 2026-01-25 21:15:01,375 | INFO     | aborting loop
[2026-01-25 22:16:09] 2026-01-25 21:15:02,107 | INFO     | all payload control threads have been joined
[2026-01-25 22:16:09] 2026-01-25 21:15:02,338 | INFO     | all data control threads have been joined
[2026-01-25 22:16:09] 2026-01-25 21:15:02,379 | INFO     | [job] retrieve thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:02,380 | INFO     | [job] job monitor thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:02,386 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:02,416 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:02,488 | INFO     | all job control threads have been joined
[2026-01-25 22:16:09] 2026-01-25 21:15:02,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 22:16:09] 2026-01-25 21:15:03,067 | INFO     | [data] copytool_in thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,113 | INFO     | [payload] control thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,181 | INFO     | [payload] failed_post thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,229 | INFO     | [payload] validate_post thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,344 | INFO     | [data] control thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,361 | INFO     | [job] validate thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,381 | INFO     | [data] copytool_out thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,494 | INFO     | [job] control thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 22:16:09] 2026-01-25 21:15:03,846 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:03,971 | INFO     | [job] queue monitor thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:07,508 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:11,939 | INFO     | job.realtimelogging is not enabled
[2026-01-25 22:16:09] 2026-01-25 21:15:12,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 22:16:09] 2026-01-25 21:15:29,825 | INFO     | PID=31329 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 22:16:09] 2026-01-25 21:15:29,825 | INFO     | .. there are 2 such processes running
[2026-01-25 22:16:09] 2026-01-25 21:15:29,827 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 22:16:09] 2026-01-25 21:15:29,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 22:16:09] 2026-01-25 21:15:29,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 22:16:09] 2026-01-25 21:15:57,252 | INFO     | [monitor] cgroup control has ended
[2026-01-25 22:16:09] 2026-01-25 21:15:58,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988984989504)>', '<ExcThread(monitor, started 139988419213056)>']
[2026-01-25 22:16:09] 2026-01-25 21:15:59,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 22:16:09] 2026-01-25 21:15:59,001 | INFO     | [monitor] control thread has ended
[2026-01-25 22:16:09] 2026-01-25 21:16:03,836 | INFO     | all workflow threads have been joined
[2026-01-25 22:16:09] 2026-01-25 21:16:03,836 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 22:16:09] 2026-01-25 21:16:03,837 | INFO     | traces error code: 0
[2026-01-25 22:16:09] 2026-01-25 21:16:03,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 22:16:09] 2026-01-25 21:16:04,291 [wrapper] ==== pilot stdout END ====
[2026-01-25 22:16:09] 2026-01-25 21:16:04,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 22:16:09] 2026-01-25 21:16:04,467 [wrapper] pilotpid: 31329
[2026-01-25 22:16:09] 2026-01-25 21:16:04,570 [wrapper] Pilot exit status: 0
[2026-01-25 22:16:09] 2026-01-25 21:16:05,130 [wrapper] pandaids: 6982676776
[2026-01-25 22:16:09] 2026-01-25 21:16:06,091 [wrapper] cleanup supervisor_pilot  9481 31330
[2026-01-25 22:16:09] 2026-01-25 21:16:06,176 [wrapper] Test setup, not cleaning
[2026-01-25 22:16:09] 2026-01-25 21:16:06,229 [wrapper] apfmon messages muted
[2026-01-25 22:16:09] 2026-01-25 21:16:06,323 [wrapper] ==== wrapper stdout END ====
[2026-01-25 22:16:09] 2026-01-25 21:16:06,423 [wrapper] ==== wrapper stderr END ====
[2026-01-25 22:16:09]  *** Error codes and diagnostics ***
[2026-01-25 22:16:09]     "exeErrorCode": 0,
[2026-01-25 22:16:09]     "exeErrorDiag": "",
[2026-01-25 22:16:09]     "pilotErrorCode": 0,
[2026-01-25 22:16:09]     "pilotErrorDiag": "",
[2026-01-25 22:16:09]  *** Listing of results directory ***
[2026-01-25 22:16:09] total 663288
[2026-01-25 22:16:09] -rwx------. 1 boinc boinc     36322 Jan 25 06:14 runpilot2-wrapper.sh
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc      5111 Jan 25 06:15 queuedata.json
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc    584422 Jan 25 06:15 pilot3.tar.gz
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc       100 Jan 25 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 22:16:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 18:09 run_atlas
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc       105 Jan 25 18:09 job.xml
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc      6392 Jan 25 18:09 init_data.xml
[2026-01-25 22:16:09] -rw-r--r--. 2 boinc boinc 490445228 Jan 25 18:09 EVNT.48310824._000103.pool.root.1
[2026-01-25 22:16:09] -rw-r--r--. 2 boinc boinc     15845 Jan 25 18:09 start_atlas.sh
[2026-01-25 22:16:09] drwxrwx--x. 2 boinc boinc        68 Jan 25 18:09 shared
[2026-01-25 22:16:09] -rw-r--r--. 2 boinc boinc    597762 Jan 25 18:09 input.tar.gz
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc         0 Jan 25 18:09 boinc_lockfile
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc      2524 Jan 25 18:09 pandaJob.out
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc       415 Jan 25 18:16 workernode_map.json
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc   1004246 Jan 25 18:16 agis_schedconf.cvmfs.json
[2026-01-25 22:16:09] drwx------. 5 boinc boinc      4096 Jan 25 18:16 pilot3
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc 179838111 Jan 25 22:13 HITS.48310826._009247.pool.root.1
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc       531 Jan 25 22:13 boinc_task_state.xml
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc      1012 Jan 25 22:14 memory_monitor_summary.json
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc   1516246 Jan 25 22:14 agis_ddmendpoints.agis.ALL.json
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc    487496 Jan 25 22:14 log.48310826._009247.job.log.tgz.1
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc      6324 Jan 25 22:14 heartbeat.json
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc        95 Jan 25 22:15 pilot_heartbeat.json
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc      8192 Jan 25 22:15 boinc_mmap_file
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc        28 Jan 25 22:15 wrapper_checkpoint.txt
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc      4953 Jan 25 22:16 pilotlog.txt
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc   2010163 Jan 25 22:16 log.48310826._009247.job.log.1
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc       357 Jan 25 22:16 output.list
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc       620 Jan 25 22:16 runtime_log
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc   2519040 Jan 25 22:16 result.tar.gz
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc      8832 Jan 25 22:16 runtime_log.err
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc       656 Jan 25 22:16 0yeNDmFd738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbm6KDmaW4VPo.diag
[2026-01-25 22:16:09] -rw-r--r--. 1 boinc boinc     20726 Jan 25 22:16 stderr.txt
[2026-01-25 22:16:09] HITS file was successfully produced:
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc 179838111 Jan 25 22:13 shared/HITS.pool.root.1
[2026-01-25 22:16:09]  *** Contents of shared directory: ***
[2026-01-25 22:16:09] total 657636
[2026-01-25 22:16:09] -rw-r--r--. 2 boinc boinc 490445228 Jan 25 18:09 ATLAS.root_0
[2026-01-25 22:16:09] -rw-r--r--. 2 boinc boinc     15845 Jan 25 18:09 start_atlas.sh
[2026-01-25 22:16:09] -rw-r--r--. 2 boinc boinc    597762 Jan 25 18:09 input.tar.gz
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc 179838111 Jan 25 22:13 HITS.pool.root.1
[2026-01-25 22:16:09] -rw-------. 1 boinc boinc   2519040 Jan 25 22:16 result.tar.gz
22:16:10 (27326): run_atlas exited; CPU time 52798.921750
22:16:10 (27326): called boinc_finish(0)

</stderr_txt>
]]>

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