Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:23:20 (1595019): wrapper (7.7.26015): starting
12:23:20 (1595019): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 12:23:20] Arguments: --nthreads 4
[2026-01-25 12:23:20] Threads: 4
[2026-01-25 12:23:20] Checking for CVMFS
[2026-01-25 12:23:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 12:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 12:23:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 12:23:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 12:23:21] 2.13.3.0 1352486 2818 54596 155509 2 49 3145332 4096001 0 130560 0 755659 99.976 106048 2055 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-25 12:23:21] CVMFS is ok
[2026-01-25 12:23:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 12:23:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-25 12:23:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-25 12:23:21] Further information can be found at the LHC@home message board.
[2026-01-25 12:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 12:23:21] Checking for apptainer binary...
[2026-01-25 12:23:21] apptainer is not installed, using version from CVMFS
[2026-01-25 12:23:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 12:23:21] localhost
[2026-01-25 12:23:21] apptainer works
[2026-01-25 12:23:21] Set ATHENA_PROC_NUMBER=4
[2026-01-25 12:23:21] Set ATHENA_CORE_NUMBER=4
[2026-01-25 12:23:21] Starting ATLAS job with PandaID=6982522467
[2026-01-25 12:23:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 14:52:58]  *** The last 200 lines of the pilot log: ***
[2026-01-25 14:52:58] 2026-01-25 14:52:09,763 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-01-25 14:52:58] 2026-01-25 14:52:09,763 | INFO     | this job has now completed (state=finished)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,763 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,763 | INFO     | log transfer has been attempted: DONE
[2026-01-25 14:52:58] 2026-01-25 14:52:09,764 | INFO     | job 6982522467 has finished - writing final server update
[2026-01-25 14:52:58] 2026-01-25 14:52:09,764 | INFO     | total number of processed events: 400 (read)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,765 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6982522467/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,765 | INFO     | extracted standard info from prmon json
[2026-01-25 14:52:58] 2026-01-25 14:52:09,765 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 14:52:58] 2026-01-25 14:52:09,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 14:52:58] 2026-01-25 14:52:09,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 14:52:58] 2026-01-25 14:52:09,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 14:52:58] 2026-01-25 14:52:09,767 | INFO     | fitting pss+swap vs Time
[2026-01-25 14:52:58] 2026-01-25 14:52:09,767 | INFO     | sum of square deviations: 964976232.5
[2026-01-25 14:52:58] 2026-01-25 14:52:09,768 | INFO     | sum of deviations: -42359337844.499985
[2026-01-25 14:52:58] 2026-01-25 14:52:09,768 | INFO     | mean x: 1769348258.5
[2026-01-25 14:52:58] 2026-01-25 14:52:09,768 | INFO     | mean y: 2473984.2671232875
[2026-01-25 14:52:58] 2026-01-25 14:52:09,768 | INFO     | intersect: 77671144073.89981
[2026-01-25 14:52:58] 2026-01-25 14:52:09,768 | INFO     | chi2: 1.407870232673558
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | sum of square deviations: 869188390.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | sum of deviations: -40009083027.00001
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | mean x: 1769348106.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | mean y: 2477727.4680851065
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | intersect: 81446266083.42992
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | chi2: 1.3957122974074057
[2026-01-25 14:52:58] 2026-01-25 14:52:09,769 | INFO     | current chi2=1.3957122974074057 (change=0.8635693108635623 %)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | right removable region: 140
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | sum of square deviations: 869188390.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | sum of deviations: -53351912659.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | mean x: 1769348411.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | mean y: 2490918.3971631206
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | intersect: 108607395186.63345
[2026-01-25 14:52:58] 2026-01-25 14:52:09,770 | INFO     | chi2: 0.3166511881396324
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | current chi2=0.3166511881396324 (change=77.50849611058904 %)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | sum of square deviations: 779958810.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | sum of deviations: -47902941899.50001
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | mean x: 1769348563.5
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | mean y: 2481596.3602941176
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | intersect: 108671042487.8057
[2026-01-25 14:52:58] 2026-01-25 14:52:09,771 | INFO     | chi2: 0.31656003970864277
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | current chi2=0.31656003970864277 (change=0.028785122053426457 %)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | left removable region: 20
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | sum of square deviations: 535786790.0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | sum of deviations: -33906921034.499996
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | mean x: 1769348685.5
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | mean y: 2463312.675
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | intersect: 111974552362.7706
[2026-01-25 14:52:58] 2026-01-25 14:52:09,772 | INFO     | chi2: 0.29326305953838716
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | current memory leak: -63.28 B/s (using 120 data points, chi2=0.29)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | ..............................
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . Timing measurements:
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . get job = 0 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . initial setup = 7 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . payload setup = 3 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . stage-in = 0 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . payload execution = 8891 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . stage-out = 0 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | . log creation = 0 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,773 | INFO     | ..............................
[2026-01-25 14:52:58] 2026-01-25 14:52:09,823 | INFO     | 
[2026-01-25 14:52:58] 2026-01-25 14:52:09,823 | INFO     | job summary report
[2026-01-25 14:52:58] 2026-01-25 14:52:09,823 | INFO     | --------------------------------------------------
[2026-01-25 14:52:58] 2026-01-25 14:52:09,823 | INFO     | PanDA job id: 6982522467
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | task id: 48310724
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | errors: (none)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | pilot state: finished 
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | transexitcode: 0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | exeerrorcode: 0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | exeerrordiag: 
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | exitcode: 0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | exitmsg: OK
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | cpuconsumptiontime: 34672 s
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | nevents: 400
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | neventsw: 0
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | pid: 1603397
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | pgrp: 1603397
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | corecount: 4
[2026-01-25 14:52:58] 2026-01-25 14:52:09,824 | INFO     | event service: False
[2026-01-25 14:52:58] 2026-01-25 14:52:09,825 | INFO     | sizes: {0: 2284245, 11: 2284245, 8898: 2312485, 8900: 2321483, 8901: 2321733}
[2026-01-25 14:52:58] 2026-01-25 14:52:09,825 | INFO     | --------------------------------------------------
[2026-01-25 14:52:58] 2026-01-25 14:52:09,825 | INFO     | 
[2026-01-25 14:52:58] 2026-01-25 14:52:09,825 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-25 14:52:58] 2026-01-25 14:52:09,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,843 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 14:52:58] 2026-01-25 14:52:09,843 | INFO     | job 6982522467 has completed (purged errors)
[2026-01-25 14:52:58] 2026-01-25 14:52:09,843 | INFO     | overall cleanup function is called
[2026-01-25 14:52:58] 2026-01-25 14:52:10,849 | INFO     | --- collectZombieJob: --- 10, [1603397]
[2026-01-25 14:52:58] 2026-01-25 14:52:10,850 | INFO     | zombie collector waiting for pid 1603397
[2026-01-25 14:52:58] 2026-01-25 14:52:10,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 14:52:58] 2026-01-25 14:52:10,850 | INFO     | collected zombie processes
[2026-01-25 14:52:58] 2026-01-25 14:52:10,850 | INFO     | will attempt to kill all subprocesses of pid=1603397
[2026-01-25 14:52:58] 2026-01-25 14:52:10,880 | INFO     | process IDs to be killed: [1603397] (in reverse order)
[2026-01-25 14:52:58] 2026-01-25 14:52:10,907 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 14:52:58] 2026-01-25 14:52:10,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 14:52:58] 2026-01-25 14:52:10,909 | INFO     | did not find any defunct processes belonging to 1603397
[2026-01-25 14:52:58] 2026-01-25 14:52:10,909 | INFO     | did not find any defunct processes belonging to 1603397
[2026-01-25 14:52:58] 2026-01-25 14:52:10,910 | INFO     | ready for new job
[2026-01-25 14:52:58] 2026-01-25 14:52:10,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | **************************************
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | **************************************
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | 
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | pilot is running in a VM
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | architecture information:
[2026-01-25 14:52:58] 2026-01-25 14:52:10,912 | INFO     | executing command: cat /etc/os-release
[2026-01-25 14:52:58] 2026-01-25 14:52:10,922 | INFO     | cat /etc/os-release:
[2026-01-25 14:52:58] NAME="CentOS Linux"
[2026-01-25 14:52:58] VERSION="7 (Core)"
[2026-01-25 14:52:58] ID="centos"
[2026-01-25 14:52:58] ID_LIKE="rhel fedora"
[2026-01-25 14:52:58] VERSION_ID="7"
[2026-01-25 14:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 14:52:58] ANSI_COLOR="0;31"
[2026-01-25 14:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 14:52:58] HOME_URL="https://www.centos.org/"
[2026-01-25 14:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 14:52:58] 
[2026-01-25 14:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 14:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 14:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 14:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 14:52:58] 
[2026-01-25 14:52:58] 2026-01-25 14:52:10,922 | INFO     | **************************************
[2026-01-25 14:52:58] 2026-01-25 14:52:11,090 | WARNING  | process 1603397 can no longer be monitored (due to stat problems) - aborting
[2026-01-25 14:52:58] 2026-01-25 14:52:11,113 | INFO     | using path: /var/lib/boinc/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 14:52:58] 2026-01-25 14:52:11,140 | INFO     | number of running child processes to parent process 1603397: 1
[2026-01-25 14:52:58] 2026-01-25 14:52:11,140 | INFO     | maximum number of monitored processes: 6
[2026-01-25 14:52:58] 2026-01-25 14:52:11,140 | INFO     | aborting job monitoring since job object (job id=6982522467) has expired
[2026-01-25 14:52:58] 2026-01-25 14:52:11,425 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-25 14:52:58] 2026-01-25 14:52:11,439 | INFO     | sufficient remaining disk space (148135477248 B)
[2026-01-25 14:52:58] 2026-01-25 14:52:11,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 14:52:58] 2026-01-25 14:52:11,440 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 14:52:58] 2026-01-25 14:52:11,440 | INFO     | update_server=False
[2026-01-25 14:52:58] 2026-01-25 14:52:11,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 14:52:58] 2026-01-25 14:52:11,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 14:52:58] 2026-01-25 14:52:11,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 14:52:58] 2026-01-25 14:52:11,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 14:52:58] 2026-01-25 14:52:11,441 | INFO     | will abort loop
[2026-01-25 14:52:58] 2026-01-25 14:52:12,381 | INFO     | all data control threads have been joined
[2026-01-25 14:52:58] 2026-01-25 14:52:12,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 14:52:58] 2026-01-25 14:52:12,445 | INFO     | [job] retrieve thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:12,446 | INFO     | [job] queue monitor thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:12,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:12,446 | INFO     | [job] job monitor thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:12,501 | INFO     | all payload control threads have been joined
[2026-01-25 14:52:58] 2026-01-25 14:52:12,517 | INFO     | [data] copytool_in thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:12,909 | INFO     | all job control threads have been joined
[2026-01-25 14:52:58] 2026-01-25 14:52:12,920 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,026 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,379 | INFO     | [payload] validate_post thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,387 | INFO     | [data] control thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,505 | INFO     | [payload] control thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,826 | INFO     | [job] validate thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,848 | INFO     | [payload] failed_post thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,913 | INFO     | [job] control thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:13,943 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:14,447 | INFO     | [data] copytool_out thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:15,447 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 14:52:58] 2026-01-25 14:52:41,618 | INFO     | PID=1599020 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 14:52:58] 2026-01-25 14:52:41,619 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 14:52:58] 2026-01-25 14:52:41,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 14:52:58] 2026-01-25 14:52:41,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 14:52:58] 2026-01-25 14:52:52,061 | INFO     | [monitor] cgroup control has ended
[2026-01-25 14:52:58] 2026-01-25 14:52:53,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530020640576)>', '<ExcThread(monitor, started 140529417303808)>']
[2026-01-25 14:52:58] 2026-01-25 14:52:53,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 14:52:58] 2026-01-25 14:52:53,681 | INFO     | [monitor] control thread has ended
[2026-01-25 14:52:58] 2026-01-25 14:52:58,104 | INFO     | all workflow threads have been joined
[2026-01-25 14:52:58] 2026-01-25 14:52:58,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 14:52:58] 2026-01-25 14:52:58,104 | INFO     | traces error code: 0
[2026-01-25 14:52:58] 2026-01-25 14:52:58,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 14:52:58] 2026-01-25 14:52:58,182 [wrapper] ==== pilot stdout END ====
[2026-01-25 14:52:58] 2026-01-25 14:52:58,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 14:52:58] 2026-01-25 14:52:58,186 [wrapper] pilotpid: 1599020
[2026-01-25 14:52:58] 2026-01-25 14:52:58,188 [wrapper] Pilot exit status: 0
[2026-01-25 14:52:58] 2026-01-25 14:52:58,197 [wrapper] pandaids: 6982522467
[2026-01-25 14:52:58] 2026-01-25 14:52:58,213 [wrapper] cleanup supervisor_pilot 1608228 1599021
[2026-01-25 14:52:58] 2026-01-25 14:52:58,216 [wrapper] Test setup, not cleaning
[2026-01-25 14:52:58] 2026-01-25 14:52:58,218 [wrapper] apfmon messages muted
[2026-01-25 14:52:58] 2026-01-25 14:52:58,220 [wrapper] ==== wrapper stdout END ====
[2026-01-25 14:52:58] 2026-01-25 14:52:58,222 [wrapper] ==== wrapper stderr END ====
[2026-01-25 14:52:58]  *** Error codes and diagnostics ***
[2026-01-25 14:52:58]     "exeErrorCode": 0,
[2026-01-25 14:52:58]     "exeErrorDiag": "",
[2026-01-25 14:52:58]     "pilotErrorCode": 0,
[2026-01-25 14:52:58]     "pilotErrorDiag": "",
[2026-01-25 14:52:58]  *** Listing of results directory ***
[2026-01-25 14:52:58] total 669212
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc    584422 Jan 25 04:03 pilot3.tar.gz
[2026-01-25 14:52:58] -rwx------ 1 boinc boinc     36322 Jan 25 04:49 runpilot2-wrapper.sh
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc      5111 Jan 25 04:49 queuedata.json
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc       100 Jan 25 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 14:52:58] -rwxr-xr-x 1 boinc boinc      7986 Jan 25 12:23 run_atlas
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc       105 Jan 25 12:23 job.xml
[2026-01-25 14:52:58] -rw-r--r-- 2 boinc boinc 498425897 Jan 25 12:23 EVNT.48310721._000111.pool.root.1
[2026-01-25 14:52:58] -rw-r--r-- 2 boinc boinc     15845 Jan 25 12:23 start_atlas.sh
[2026-01-25 14:52:58] drwxrwx--x 2 boinc boinc      4096 Jan 25 12:23 shared
[2026-01-25 14:52:58] -rw-r--r-- 2 boinc boinc    597764 Jan 25 12:23 input.tar.gz
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc      5959 Jan 25 12:23 init_data.xml
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc         0 Jan 25 12:23 boinc_setup_complete
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc         0 Jan 25 12:23 boinc_lockfile
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc      2530 Jan 25 12:23 pandaJob.out
[2026-01-25 14:52:58] -rw------- 1 boinc boinc   1004254 Jan 25 12:23 agis_schedconf.cvmfs.json
[2026-01-25 14:52:58] -rw------- 1 boinc boinc   1516246 Jan 25 12:23 agis_ddmendpoints.agis.ALL.json
[2026-01-25 14:52:58] -rw------- 1 boinc boinc       406 Jan 25 12:23 workernode_map.json
[2026-01-25 14:52:58] drwx------ 5 boinc boinc      4096 Jan 25 12:23 pilot3
[2026-01-25 14:52:58] -rw------- 1 boinc boinc 179759175 Jan 25 14:51 HITS.48310724._005501.pool.root.1
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc       530 Jan 25 14:51 boinc_task_state.xml
[2026-01-25 14:52:58] -rw------- 1 boinc boinc      1007 Jan 25 14:52 memory_monitor_summary.json
[2026-01-25 14:52:58] -rw------- 1 boinc boinc    304670 Jan 25 14:52 log.48310724._005501.job.log.tgz.1
[2026-01-25 14:52:58] -rw------- 1 boinc boinc      6241 Jan 25 14:52 heartbeat.json
[2026-01-25 14:52:58] -rw------- 1 boinc boinc        95 Jan 25 14:52 pilot_heartbeat.json
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc        27 Jan 25 14:52 wrapper_checkpoint.txt
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc      8192 Jan 25 14:52 boinc_mmap_file
[2026-01-25 14:52:58] -rw------- 1 boinc boinc      5328 Jan 25 14:52 pilotlog.txt
[2026-01-25 14:52:58] -rw------- 1 boinc boinc   1267641 Jan 25 14:52 log.48310724._005501.job.log.1
[2026-01-25 14:52:58] -rw------- 1 boinc boinc       357 Jan 25 14:52 output.list
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc       620 Jan 25 14:52 runtime_log
[2026-01-25 14:52:58] -rw------- 1 boinc boinc   1587200 Jan 25 14:52 result.tar.gz
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc      8777 Jan 25 14:52 runtime_log.err
[2026-01-25 14:52:58] -rw------- 1 boinc boinc       644 Jan 25 14:52 jLMNDmRF738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgc6KDmsCc7im.diag
[2026-01-25 14:52:58] -rw-r--r-- 1 boinc boinc     21313 Jan 25 14:52 stderr.txt
[2026-01-25 14:52:58] HITS file was successfully produced:
[2026-01-25 14:52:58] -rw------- 1 boinc boinc 179759175 Jan 25 14:51 shared/HITS.pool.root.1
[2026-01-25 14:52:58]  *** Contents of shared directory: ***
[2026-01-25 14:52:58] total 664456
[2026-01-25 14:52:58] -rw-r--r-- 2 boinc boinc 498425897 Jan 25 12:23 ATLAS.root_0
[2026-01-25 14:52:58] -rw-r--r-- 2 boinc boinc     15845 Jan 25 12:23 start_atlas.sh
[2026-01-25 14:52:58] -rw-r--r-- 2 boinc boinc    597764 Jan 25 12:23 input.tar.gz
[2026-01-25 14:52:58] -rw------- 1 boinc boinc 179759175 Jan 25 14:51 HITS.pool.root.1
[2026-01-25 14:52:58] -rw------- 1 boinc boinc   1587200 Jan 25 14:52 result.tar.gz
14:52:59 (1595019): run_atlas exited; CPU time 34700.487216
14:52:59 (1595019): called boinc_finish(0)

</stderr_txt>
]]>

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