Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:03 (28185): wrapper (7.7.26015): starting
16:50:03 (28185): wrapper: running run_atlas (--nthreads 8)
[2026-01-25 16:50:03] Arguments: --nthreads 8
[2026-01-25 16:50:03] Threads: 8
[2026-01-25 16:50:03] Checking for CVMFS
[2026-01-25 16:50:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-25 16:50:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-25 16:50:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-25 16:50:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-25 16:50:07] 2.11.2.0 23879 58656 136972 155513 0 242 22569769 25165825 4016 130560 0 14660786 99.696 16615735 2101 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-25 16:50:07] CVMFS is ok
[2026-01-25 16:50:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 16:50:07] Checking for apptainer binary...
[2026-01-25 16:50:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-25 16:50:07] Running /usr/bin/apptainer --version
[2026-01-25 16:50:07] apptainer version 1.3.2-1.el7
[2026-01-25 16:50:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 16:50:42] cg-vwn385.simple-grid.lan
[2026-01-25 16:50:42] apptainer works
[2026-01-25 16:50:43] Set ATHENA_PROC_NUMBER=8
[2026-01-25 16:50:43] Set ATHENA_CORE_NUMBER=8
[2026-01-25 16:50:43] Starting ATLAS job with PandaID=6982024678
[2026-01-25 16:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 20:47:33]  *** The last 200 lines of the pilot log: ***
[2026-01-25 20:47:33] 2026-01-25 19:46:29,740 | INFO     | job 6982024678 has state=finished
[2026-01-25 20:47:33] 2026-01-25 19:46:29,741 | INFO     | preparing for final server update for job 6982024678 in state='finished'
[2026-01-25 20:47:33] 2026-01-25 19:46:29,741 | INFO     | reading metadata from: /var/lib/boinc/slots/12/PanDA_Pilot-6982024678/jobReport.json
[2026-01-25 20:47:33] 2026-01-25 19:46:29,743 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/12/workernode_map.json
[2026-01-25 20:47:33] 2026-01-25 19:46:29,744 | INFO     | this job has now completed (state=finished)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,744 | INFO     | log transfer has been attempted: DONE
[2026-01-25 20:47:33] 2026-01-25 19:46:29,744 | INFO     | job 6982024678 has finished - writing final server update
[2026-01-25 20:47:33] 2026-01-25 19:46:29,745 | INFO     | total number of processed events: 400 (read)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,746 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6982024678/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,747 | INFO     | extracted standard info from prmon json
[2026-01-25 20:47:33] 2026-01-25 19:46:29,747 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 20:47:33] 2026-01-25 19:46:29,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 20:47:33] 2026-01-25 19:46:29,748 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 20:47:33] 2026-01-25 19:46:29,748 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 20:47:33] 2026-01-25 19:46:29,752 | INFO     | fitting pss+swap vs Time
[2026-01-25 20:47:33] 2026-01-25 19:46:29,753 | INFO     | sum of square deviations: 3438620752.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,755 | INFO     | sum of deviations: 41542539884.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,755 | INFO     | mean x: 1769363580.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,755 | INFO     | mean y: 2455930.121076233
[2026-01-25 20:47:33] 2026-01-25 19:46:29,755 | INFO     | intersect: -21373514958.40889
[2026-01-25 20:47:33] 2026-01-25 19:46:29,755 | INFO     | chi2: 3.410545643329338
[2026-01-25 20:47:33] 2026-01-25 19:46:29,756 | INFO     | sum of square deviations: 3212467674.5
[2026-01-25 20:47:33] 2026-01-25 19:46:29,758 | INFO     | sum of deviations: 55096008799.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,758 | INFO     | mean x: 1769363427.5
[2026-01-25 20:47:33] 2026-01-25 19:46:29,758 | INFO     | mean y: 2464888.752293578
[2026-01-25 20:47:33] 2026-01-25 19:46:29,758 | INFO     | intersect: -30343323099.71103
[2026-01-25 20:47:33] 2026-01-25 19:46:29,763 | INFO     | chi2: 2.652954604557071
[2026-01-25 20:47:33] 2026-01-25 19:46:29,763 | INFO     | current chi2=2.652954604557071 (change=22.213191612140836 %)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,763 | INFO     | right removable region: 217
[2026-01-25 20:47:33] 2026-01-25 19:46:29,763 | INFO     | sum of square deviations: 3212467674.5
[2026-01-25 20:47:33] 2026-01-25 19:46:29,765 | INFO     | sum of deviations: -12105564832.500002
[2026-01-25 20:47:33] 2026-01-25 19:46:29,765 | INFO     | mean x: 1769363732.5
[2026-01-25 20:47:33] 2026-01-25 19:46:29,765 | INFO     | mean y: 2491907.0229357798
[2026-01-25 20:47:33] 2026-01-25 19:46:29,766 | INFO     | intersect: 6669997870.141053
[2026-01-25 20:47:33] 2026-01-25 19:46:29,766 | INFO     | chi2: 0.8566368312615028
[2026-01-25 20:47:33] 2026-01-25 19:46:29,766 | INFO     | current chi2=0.8566368312615028 (change=74.8827043867015 %)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,767 | INFO     | sum of square deviations: 2996454322.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,768 | INFO     | sum of deviations: -14057101323.999998
[2026-01-25 20:47:33] 2026-01-25 19:46:29,768 | INFO     | mean x: 1769363885.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,768 | INFO     | mean y: 2493243.835680751
[2026-01-25 20:47:33] 2026-01-25 19:46:29,769 | INFO     | intersect: 8303012703.738625
[2026-01-25 20:47:33] 2026-01-25 19:46:29,769 | INFO     | chi2: 0.8350611287104099
[2026-01-25 20:47:33] 2026-01-25 19:46:29,769 | INFO     | current chi2=0.8350611287104099 (change=2.5186522180373685 %)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,769 | INFO     | left removable region: 20
[2026-01-25 20:47:33] 2026-01-25 19:46:29,769 | INFO     | sum of square deviations: 2370641658.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,771 | INFO     | sum of deviations: 5440560476.000006
[2026-01-25 20:47:33] 2026-01-25 19:46:29,771 | INFO     | mean x: 1769364007.0
[2026-01-25 20:47:33] 2026-01-25 19:46:29,771 | INFO     | mean y: 2499365.664974619
[2026-01-25 20:47:33] 2026-01-25 19:46:29,771 | INFO     | intersect: -4058144659.405641
[2026-01-25 20:47:33] 2026-01-25 19:46:29,772 | INFO     | chi2: 0.0005280731405098557
[2026-01-25 20:47:33] 2026-01-25 19:46:29,772 | INFO     | current memory leak: 2.29 B/s (using 197 data points, chi2=0.00)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,772 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | ..............................
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . Timing measurements:
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . get job = 0 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . initial setup = 102 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . payload setup = 118 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . stage-in = 0 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . payload execution = 13685 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . stage-out = 3 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | . log creation = 1 s
[2026-01-25 20:47:33] 2026-01-25 19:46:29,773 | INFO     | ..............................
[2026-01-25 20:47:33] 2026-01-25 19:46:30,310 | INFO     | 
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | job summary report
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | --------------------------------------------------
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | PanDA job id: 6982024678
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | task id: 48310826
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | errors: (none)
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | pilot state: finished 
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | transexitcode: 0
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | exeerrorcode: 0
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | exeerrordiag: 
[2026-01-25 20:47:33] 2026-01-25 19:46:30,311 | INFO     | exitcode: 0
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | exitmsg: OK
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | cpuconsumptiontime: 51945 s
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | nevents: 400
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | neventsw: 0
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | pid: 4406
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | pgrp: 4406
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | corecount: 8
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | event service: False
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | sizes: {0: 2283811, 1: 2284212, 2: 2284272, 12: 2284300, 13808: 2314509, 13813: 2323509, 13816: 2323693, 13819: 2323887}
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | --------------------------------------------------
[2026-01-25 20:47:33] 2026-01-25 19:46:30,312 | INFO     | 
[2026-01-25 20:47:33] 2026-01-25 19:46:30,313 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-25 20:47:33] 2026-01-25 19:46:30,791 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,791 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,791 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,791 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,793 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 20:47:33] 2026-01-25 19:46:30,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,793 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 20:47:33] 2026-01-25 19:46:30,793 | INFO     | job 6982024678 has completed (purged errors)
[2026-01-25 20:47:33] 2026-01-25 19:46:30,793 | INFO     | overall cleanup function is called
[2026-01-25 20:47:33] 2026-01-25 19:46:31,802 | INFO     | --- collectZombieJob: --- 10, [4406]
[2026-01-25 20:47:33] 2026-01-25 19:46:31,803 | INFO     | zombie collector waiting for pid 4406
[2026-01-25 20:47:33] 2026-01-25 19:46:31,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 20:47:33] 2026-01-25 19:46:31,803 | INFO     | collected zombie processes
[2026-01-25 20:47:33] 2026-01-25 19:46:31,803 | INFO     | will attempt to kill all subprocesses of pid=4406
[2026-01-25 20:47:33] 2026-01-25 19:46:31,914 | INFO     | process IDs to be killed: [4406] (in reverse order)
[2026-01-25 20:47:33] 2026-01-25 19:46:32,481 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 20:47:33] 2026-01-25 19:46:32,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 20:47:33] 2026-01-25 19:46:32,484 | INFO     | did not find any defunct processes belonging to 4406
[2026-01-25 20:47:33] 2026-01-25 19:46:32,487 | INFO     | did not find any defunct processes belonging to 4406
[2026-01-25 20:47:33] 2026-01-25 19:46:32,487 | INFO     | ready for new job
[2026-01-25 20:47:33] 2026-01-25 19:46:32,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 20:47:33] 2026-01-25 19:46:32,492 | INFO     | **************************************
[2026-01-25 20:47:33] 2026-01-25 19:46:32,493 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 20:47:33] 2026-01-25 19:46:32,493 | INFO     | **************************************
[2026-01-25 20:47:33] 2026-01-25 19:46:32,493 | INFO     | 
[2026-01-25 20:47:33] 2026-01-25 19:46:32,496 | INFO     | pilot is running in a VM
[2026-01-25 20:47:33] 2026-01-25 19:46:32,496 | INFO     | architecture information:
[2026-01-25 20:47:33] 2026-01-25 19:46:32,503 | INFO     | executing command: cat /etc/os-release
[2026-01-25 20:47:33] 2026-01-25 19:46:32,744 | INFO     | cat /etc/os-release:
[2026-01-25 20:47:33] NAME="CentOS Linux"
[2026-01-25 20:47:33] VERSION="7 (Core)"
[2026-01-25 20:47:33] ID="centos"
[2026-01-25 20:47:33] ID_LIKE="rhel fedora"
[2026-01-25 20:47:33] VERSION_ID="7"
[2026-01-25 20:47:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 20:47:33] ANSI_COLOR="0;31"
[2026-01-25 20:47:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 20:47:33] HOME_URL="https://www.centos.org/"
[2026-01-25 20:47:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 20:47:33] 
[2026-01-25 20:47:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 20:47:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 20:47:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 20:47:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 20:47:33] 
[2026-01-25 20:47:33] 2026-01-25 19:46:32,744 | INFO     | **************************************
[2026-01-25 20:47:33] 2026-01-25 19:46:33,247 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-25 20:47:33] 2026-01-25 19:46:33,375 | INFO     | sufficient remaining disk space (496596156416 B)
[2026-01-25 20:47:33] 2026-01-25 19:46:33,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 20:47:33] 2026-01-25 19:46:33,376 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 20:47:33] 2026-01-25 19:46:33,376 | INFO     | update_server=False
[2026-01-25 20:47:33] 2026-01-25 19:46:33,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 20:47:33] 2026-01-25 19:46:33,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 20:47:33] 2026-01-25 19:46:33,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 20:47:33] 2026-01-25 19:46:33,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:47:33] 2026-01-25 19:46:33,384 | INFO     | aborting loop
[2026-01-25 20:47:33] 2026-01-25 19:46:33,560 | INFO     | all data control threads have been joined
[2026-01-25 20:47:33] 2026-01-25 19:46:34,306 | INFO     | all job control threads have been joined
[2026-01-25 20:47:33] 2026-01-25 19:46:34,382 | INFO     | [job] retrieve thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:34,389 | INFO     | [job] job monitor thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:34,561 | INFO     | all payload control threads have been joined
[2026-01-25 20:47:33] 2026-01-25 19:46:34,566 | INFO     | [data] control thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:34,702 | INFO     | [payload] failed_post thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:34,716 | INFO     | [payload] validate_post thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:34,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 20:47:33] 2026-01-25 19:46:35,078 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,112 | INFO     | [job] validate thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,187 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,312 | INFO     | [job] control thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,393 | INFO     | [data] copytool_out thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,536 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,567 | INFO     | [payload] control thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,775 | INFO     | [data] copytool_in thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:35,932 | INFO     | [job] queue monitor thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:37,386 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:46:43,835 | INFO     | job.realtimelogging is not enabled
[2026-01-25 20:47:33] 2026-01-25 19:46:44,841 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 20:47:33] 2026-01-25 19:47:02,162 | INFO     | PID=32296 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-25 20:47:33] 2026-01-25 19:47:02,162 | INFO     | .. there are 9 such processes running
[2026-01-25 20:47:33] 2026-01-25 19:47:02,163 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 20:47:33] 2026-01-25 19:47:02,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 20:47:33] 2026-01-25 19:47:02,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 20:47:33] 2026-01-25 19:47:21,995 | INFO     | [monitor] cgroup control has ended
[2026-01-25 20:47:33] 2026-01-25 19:47:23,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123504887616)>', '<ExcThread(monitor, started 140123190564608)>']
[2026-01-25 20:47:33] 2026-01-25 19:47:23,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 20:47:33] 2026-01-25 19:47:23,289 | INFO     | [monitor] control thread has ended
[2026-01-25 20:47:33] 2026-01-25 19:47:28,199 | INFO     | all workflow threads have been joined
[2026-01-25 20:47:33] 2026-01-25 19:47:28,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 20:47:33] 2026-01-25 19:47:28,200 | INFO     | traces error code: 0
[2026-01-25 20:47:33] 2026-01-25 19:47:28,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 20:47:33] 2026-01-25 19:47:28,638 [wrapper] ==== pilot stdout END ====
[2026-01-25 20:47:33] 2026-01-25 19:47:28,759 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 20:47:33] 2026-01-25 19:47:28,863 [wrapper] pilotpid: 32296
[2026-01-25 20:47:33] 2026-01-25 19:47:28,966 [wrapper] Pilot exit status: 0
[2026-01-25 20:47:33] 2026-01-25 19:47:29,452 [wrapper] pandaids: 6982024678
[2026-01-25 20:47:33] 2026-01-25 19:47:30,512 [wrapper] cleanup supervisor_pilot 27694 32297
[2026-01-25 20:47:33] 2026-01-25 19:47:30,609 [wrapper] Test setup, not cleaning
[2026-01-25 20:47:33] 2026-01-25 19:47:30,724 [wrapper] apfmon messages muted
[2026-01-25 20:47:33] 2026-01-25 19:47:30,813 [wrapper] ==== wrapper stdout END ====
[2026-01-25 20:47:33] 2026-01-25 19:47:30,909 [wrapper] ==== wrapper stderr END ====
[2026-01-25 20:47:33]  *** Error codes and diagnostics ***
[2026-01-25 20:47:33]     "exeErrorCode": 0,
[2026-01-25 20:47:33]     "exeErrorDiag": "",
[2026-01-25 20:47:33]     "pilotErrorCode": 0,
[2026-01-25 20:47:33]     "pilotErrorDiag": "",
[2026-01-25 20:47:33]  *** Listing of results directory ***
[2026-01-25 20:47:33] total 673276
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc    584422 Jan 25 01:25 pilot3.tar.gz
[2026-01-25 20:47:33] -rwx------. 1 boinc boinc     36322 Jan 25 01:25 runpilot2-wrapper.sh
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc      5111 Jan 25 01:25 queuedata.json
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc       100 Jan 25 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 20:47:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan 25 16:50 run_atlas
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc       105 Jan 25 16:50 job.xml
[2026-01-25 20:47:33] -rw-r--r--. 2 boinc boinc 498973224 Jan 25 16:50 EVNT.48310824._000059.pool.root.1
[2026-01-25 20:47:33] -rw-r--r--. 2 boinc boinc    597757 Jan 25 16:50 input.tar.gz
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc      6392 Jan 25 16:50 init_data.xml
[2026-01-25 20:47:33] -rw-r--r--. 2 boinc boinc     15845 Jan 25 16:50 start_atlas.sh
[2026-01-25 20:47:33] drwxrwx--x. 2 boinc boinc        68 Jan 25 16:50 shared
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc         0 Jan 25 16:50 boinc_lockfile
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc      2524 Jan 25 16:50 pandaJob.out
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc       415 Jan 25 16:55 workernode_map.json
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc   1004238 Jan 25 16:55 agis_schedconf.cvmfs.json
[2026-01-25 20:47:33] drwx------. 5 boinc boinc      4096 Jan 25 16:55 pilot3
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc 181699174 Jan 25 20:45 HITS.48310826._007002.pool.root.1
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc       531 Jan 25 20:45 boinc_task_state.xml
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc      1017 Jan 25 20:46 memory_monitor_summary.json
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc   1516246 Jan 25 20:46 agis_ddmendpoints.agis.ALL.json
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc    487030 Jan 25 20:46 log.48310826._007002.job.log.tgz.1
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc      6322 Jan 25 20:46 heartbeat.json
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc        95 Jan 25 20:47 pilot_heartbeat.json
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc      8192 Jan 25 20:47 boinc_mmap_file
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc        28 Jan 25 20:47 wrapper_checkpoint.txt
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc      4953 Jan 25 20:47 pilotlog.txt
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc   1930596 Jan 25 20:47 log.48310826._007002.job.log.1
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc       357 Jan 25 20:47 output.list
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc       620 Jan 25 20:47 runtime_log
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc   2437120 Jan 25 20:47 result.tar.gz
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc      8832 Jan 25 20:47 runtime_log.err
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc       655 Jan 25 20:47 dEJMDmU7238nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOA6KDmB35Kjn.diag
[2026-01-25 20:47:33] -rw-r--r--. 1 boinc boinc     20890 Jan 25 20:47 stderr.txt
[2026-01-25 20:47:33] HITS file was successfully produced:
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc 181699174 Jan 25 20:45 shared/HITS.pool.root.1
[2026-01-25 20:47:33]  *** Contents of shared directory: ***
[2026-01-25 20:47:33] total 667704
[2026-01-25 20:47:33] -rw-r--r--. 2 boinc boinc 498973224 Jan 25 16:50 ATLAS.root_0
[2026-01-25 20:47:33] -rw-r--r--. 2 boinc boinc    597757 Jan 25 16:50 input.tar.gz
[2026-01-25 20:47:33] -rw-r--r--. 2 boinc boinc     15845 Jan 25 16:50 start_atlas.sh
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc 181699174 Jan 25 20:45 HITS.pool.root.1
[2026-01-25 20:47:33] -rw-------. 1 boinc boinc   2437120 Jan 25 20:47 result.tar.gz
20:47:34 (28185): run_atlas exited; CPU time 52155.968422
20:47:34 (28185): called boinc_finish(0)

</stderr_txt>
]]>

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