Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:45:51 (1442646): wrapper (7.7.26015): starting
23:45:51 (1442646): wrapper: running run_atlas (--nthreads 12)
[2026-01-24 23:45:51] Arguments: --nthreads 12
[2026-01-24 23:45:51] Threads: 12
[2026-01-24 23:45:51] Checking for CVMFS
[2026-01-24 23:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 23:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 23:45:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 23:45:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 23:45:52] 2.11.5.0 704438 79312 380536 155499 2 379 37877871 45568001 15027 130560 0 621513370 99.797 379696398 21299 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-24 23:45:52] CVMFS is ok
[2026-01-24 23:45:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 23:45:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 23:45:52] Further information can be found at the LHC@home message board.
[2026-01-24 23:45:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 23:45:52] Checking for apptainer binary...
[2026-01-24 23:45:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 23:45:52] Running /usr/bin/apptainer --version
[2026-01-24 23:45:52] apptainer version 1.4.1-1.el9
[2026-01-24 23:45:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 23:45:52] wns0084.triumf.lcg
[2026-01-24 23:45:52] apptainer works
[2026-01-24 23:45:52] Set ATHENA_PROC_NUMBER=12
[2026-01-24 23:45:52] Set ATHENA_CORE_NUMBER=12
[2026-01-24 23:45:52] Starting ATLAS job with PandaID=6976460197
[2026-01-24 23:45:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 23:50:39]  *** The last 200 lines of the pilot log: ***
[2026-01-24 23:50:39] 2026-01-25 07:50:05,245 | WARNING  | wrong length of table data, x=[1769327203.0, 1769327264.0], y=[1631.0, 562386.0] (must be same and length>=4)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | could have reported an average CPU frequency of 2673 MHz (4 samples)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | ..............................
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . Timing measurements:
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . get job = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . initial setup = 11 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . payload setup = 11 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . stage-in = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . payload execution = 86 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . stage-out = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . log creation = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | ..............................
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6976460197/pilotlog.txt
[2026-01-24 23:50:39] 2026-01-25 07:50:05,266 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-24 23:50:39] - Log from pilotlog.txt -
[2026-01-24 23:50:39] 2026-01-25 07:50:05,243 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6976460197/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,243 | INFO     | extracted standard info from prmon json
[2026-01-24 23:50:39] 2026-01-25 07:50:05,243 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 23:50:39] 2026-01-25 07:50:05,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 23:50:39] 2026-01-25 07:50:05,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 23:50:39] 2026-01-25 07:50:05,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 23:50:39] 2026-01-25 07:50:05,245 | WARNING  | wrong length of table data, x=[1769327203.0, 1769327264.0], y=[1631.0, 562386.0] (must be same and length>=4)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | could have reported an average CPU frequency of 2673 MHz (4 samples)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | ..............................
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . Timing measurements:
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . get job = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . initial setup = 11 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . payload setup = 11 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . stage-in = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . payload execution = 86 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . stage-out = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . log creation = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | ..............................
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6976460197/pilotlog.txt
[2026-01-24 23:50:39] 2026-01-25 07:50:05,266 | WARNING  | 
[2026-01-24 23:50:39] [begin log extracts]
[2026-01-24 23:50:39] - Log from pilotlog.txt -
[2026-01-24 23:50:39] 2026-01-25 07:50:05,243 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6976460197/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,243 | INFO     | extracted standard info from prmon json
[2026-01-24 23:50:39] 2026-01-25 07:50:05,243 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 23:50:39] 2026-01-25 07:50:05,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 23:50:39] 2026-01-25 07:50:05,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 23:50:39] 2026-01-25 07:50:05,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 23:50:39] 2026-01-25 07:50:05,245 | WARNING  | wrong length of table data, x=[1769327203.0, 1769327264.0], y=[1631.0, 562386.0] (must be same and length>=4)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | could have reported an average CPU frequency of 2673 MHz (4 samples)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | ..............................
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . Timing measurements:
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . get job = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . initial setup = 11 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . payload setup = 11 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . stage-in = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . payload execution = 86 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . stage-out = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | . log creation = 0 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | ..............................
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-24 23:50:39] 2026-01-25 07:50:05,246 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6976460197/pilotlog.txt
[2026-01-24 23:50:39] [end log extracts]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,266 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,267 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-24 23:50:39] 2026-01-25 07:50:05,319 | INFO     | 
[2026-01-24 23:50:39] 2026-01-25 07:50:05,319 | INFO     | job summary report
[2026-01-24 23:50:39] 2026-01-25 07:50:05,319 | INFO     | --------------------------------------------------
[2026-01-24 23:50:39] 2026-01-25 07:50:05,319 | INFO     | PanDA job id: 6976460197
[2026-01-24 23:50:39] 2026-01-25 07:50:05,319 | INFO     | task id: 47947082
[2026-01-24 23:50:39] 2026-01-25 07:50:05,319 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-24 23:47:55,542 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-24 23:50:39] 2026-01-25 07:50:05,320 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-24 23:50:39] 2026-01-25 07:50:05,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 23:50:39] 2026-01-25 07:50:05,320 | INFO     | pilot state: failed 
[2026-01-24 23:50:39] 2026-01-25 07:50:05,320 | INFO     | transexitcode: 65
[2026-01-24 23:50:39] 2026-01-25 07:50:05,320 | INFO     | exeerrorcode: 65
[2026-01-24 23:50:39] 2026-01-25 07:50:05,320 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | exitcode: 65
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | cpuconsumptiontime: 35 s
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | nevents: 0
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | neventsw: 0
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | pid: 1451019
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | pgrp: 1451019
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | corecount: 12
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | event service: False
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | sizes: {0: 2284378, 1: 2284839, 100: 2310217, 101: 2314507, 104: 2314535, 222: 2314701}
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | --------------------------------------------------
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | 
[2026-01-24 23:50:39] 2026-01-25 07:50:05,321 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-24 23:50:39] 2026-01-25 07:50:05,339 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,339 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,339 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 23:50:39] 2026-01-25 07:50:05,340 | INFO     | job 6976460197 has completed (purged errors)
[2026-01-24 23:50:39] 2026-01-25 07:50:05,341 | INFO     | overall cleanup function is called
[2026-01-24 23:50:39] 2026-01-25 07:50:06,169 | INFO     | PID=1446528 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 23:50:39] 2026-01-25 07:50:06,169 | INFO     | .. there are 20 such processes running
[2026-01-24 23:50:39] 2026-01-25 07:50:06,354 | INFO     | --- collectZombieJob: --- 10, [1451019]
[2026-01-24 23:50:39] 2026-01-25 07:50:06,354 | INFO     | zombie collector waiting for pid 1451019
[2026-01-24 23:50:39] 2026-01-25 07:50:06,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 23:50:39] 2026-01-25 07:50:06,354 | INFO     | collected zombie processes
[2026-01-24 23:50:39] 2026-01-25 07:50:06,354 | INFO     | will attempt to kill all subprocesses of pid=1451019
[2026-01-24 23:50:39] 2026-01-25 07:50:06,800 | INFO     | process IDs to be killed: [1451019] (in reverse order)
[2026-01-24 23:50:39] 2026-01-25 07:50:06,864 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 23:50:39] 2026-01-25 07:50:06,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 23:50:39] 2026-01-25 07:50:06,870 | INFO     | did not find any defunct processes belonging to 1451019
[2026-01-24 23:50:39] 2026-01-25 07:50:06,875 | INFO     | did not find any defunct processes belonging to 1451019
[2026-01-24 23:50:39] 2026-01-25 07:50:06,875 | INFO     | ready for new job
[2026-01-24 23:50:39] 2026-01-25 07:50:06,876 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 23:50:39] 2026-01-25 07:50:06,877 | INFO     | **************************************
[2026-01-24 23:50:39] 2026-01-25 07:50:06,877 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 23:50:39] 2026-01-25 07:50:06,877 | INFO     | **************************************
[2026-01-24 23:50:39] 2026-01-25 07:50:06,877 | INFO     | 
[2026-01-24 23:50:39] 2026-01-25 07:50:06,879 | INFO     | architecture information:
[2026-01-24 23:50:39] 2026-01-25 07:50:06,880 | INFO     | executing command: cat /etc/os-release
[2026-01-24 23:50:39] 2026-01-25 07:50:06,890 | INFO     | cat /etc/os-release:
[2026-01-24 23:50:39] NAME="CentOS Linux"
[2026-01-24 23:50:39] VERSION="7 (Core)"
[2026-01-24 23:50:39] ID="centos"
[2026-01-24 23:50:39] ID_LIKE="rhel fedora"
[2026-01-24 23:50:39] VERSION_ID="7"
[2026-01-24 23:50:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 23:50:39] ANSI_COLOR="0;31"
[2026-01-24 23:50:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 23:50:39] HOME_URL="https://www.centos.org/"
[2026-01-24 23:50:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 23:50:39] 
[2026-01-24 23:50:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 23:50:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 23:50:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 23:50:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 23:50:39] 
[2026-01-24 23:50:39] 2026-01-25 07:50:06,891 | INFO     | **************************************
[2026-01-24 23:50:39] 2026-01-25 07:50:07,394 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-24 23:50:39] 2026-01-25 07:50:07,493 | INFO     | sufficient remaining disk space (2026574446592 B)
[2026-01-24 23:50:39] 2026-01-25 07:50:07,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 23:50:39] 2026-01-25 07:50:07,494 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 23:50:39] 2026-01-25 07:50:07,494 | INFO     | update_server=False
[2026-01-24 23:50:39] 2026-01-25 07:50:07,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 23:50:39] 2026-01-25 07:50:07,502 | INFO     | all job control threads have been joined
[2026-01-24 23:50:39] 2026-01-25 07:50:07,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 23:50:39] 2026-01-25 07:50:07,544 | INFO     | all data control threads have been joined
[2026-01-24 23:50:39] 2026-01-25 07:50:08,299 | INFO     | all payload control threads have been joined
[2026-01-24 23:50:39] 2026-01-25 07:50:08,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 23:50:39] 2026-01-25 07:50:08,303 | INFO     | aborting loop
[2026-01-24 23:50:39] 2026-01-25 07:50:08,500 | INFO     | [job] retrieve thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:08,523 | INFO     | [job] control thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:08,550 | INFO     | [data] control thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:08,745 | INFO     | [payload] validate_post thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,101 | INFO     | [job] validate thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,306 | INFO     | [payload] control thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,309 | INFO     | [job] job monitor thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,351 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,351 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,515 | INFO     | [data] copytool_out thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,617 | INFO     | [data] copytool_in thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,716 | INFO     | [payload] failed_post thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:09,810 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:10,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 23:50:39] 2026-01-25 07:50:10,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 23:50:39] 2026-01-25 07:50:11,343 | INFO     | [job] queue monitor thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:14,587 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 23:50:39] 2026-01-25 07:50:21,208 | INFO     | [monitor] cgroup control has ended
[2026-01-24 23:50:39] 2026-01-25 07:50:22,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271614752576)>', '<ExcThread(monitor, started 140270913959680)>']
[2026-01-24 23:50:39] 2026-01-25 07:50:27,709 | INFO     | all workflow threads have been joined
[2026-01-24 23:50:39] 2026-01-25 07:50:27,709 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 23:50:39] 2026-01-25 07:50:27,709 | INFO     | traces error code: 0
[2026-01-24 23:50:39] 2026-01-25 07:50:27,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 23:50:39] 2026-01-25 07:50:38,893 | INFO     | PID=1446528 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 23:50:39] 2026-01-25 07:50:38,894 | INFO     | .. there are 20 such processes running
[2026-01-24 23:50:39] 2026-01-25 07:50:38,895 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 23:50:39] 2026-01-25 07:50:38,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 23:50:39] 2026-01-25 07:50:38,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 23:50:39] 2026-01-25 07:50:38,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 23:50:39] 2026-01-25 07:50:38,895 | INFO     | [monitor] control thread has ended
[2026-01-24 23:50:39] 2026-01-25 07:50:39,397 [wrapper] ==== pilot stdout END ====
[2026-01-24 23:50:39] 2026-01-25 07:50:39,399 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 23:50:39] 2026-01-25 07:50:39,401 [wrapper] pilotpid: 1446528
[2026-01-24 23:50:39] 2026-01-25 07:50:39,403 [wrapper] Pilot exit status: 0
[2026-01-24 23:50:39] 2026-01-25 07:50:39,415 [wrapper] pandaids: 6976460197
[2026-01-24 23:50:39] 2026-01-25 07:50:39,464 [wrapper] cleanup supervisor_pilot 1446534 1446529
[2026-01-24 23:50:39] 2026-01-25 07:50:39,474 [wrapper] Test setup, not cleaning
[2026-01-24 23:50:39] 2026-01-25 07:50:39,487 [wrapper] apfmon messages muted
[2026-01-24 23:50:39] 2026-01-25 07:50:39,488 [wrapper] ==== wrapper stdout END ====
[2026-01-24 23:50:39] 2026-01-25 07:50:39,490 [wrapper] ==== wrapper stderr END ====
[2026-01-24 23:50:39]  *** Error codes and diagnostics ***
[2026-01-24 23:50:39]     "exeErrorCode": 65,
[2026-01-24 23:50:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-24 23:50:39]     "pilotErrorCode": 1305,
[2026-01-24 23:50:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-24 23:50:39]  *** Listing of results directory ***
[2026-01-24 23:50:39] total 409104
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc    584422 Jan 20 06:43 pilot3.tar.gz
[2026-01-24 23:50:39] -rwx------. 1 boinc boinc     36322 Jan 20 06:47 runpilot2-wrapper.sh
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc      5111 Jan 20 06:48 queuedata.json
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc       100 Jan 24 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 23:50:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 23:45 run_atlas
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc       105 Jan 24 23:45 job.xml
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc      6595 Jan 24 23:45 init_data.xml
[2026-01-24 23:50:39] -rw-r--r--. 2 boinc boinc 414715478 Jan 24 23:45 EVNT.47947080._000135.pool.root.1
[2026-01-24 23:50:39] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:45 start_atlas.sh
[2026-01-24 23:50:39] drwxrwx--x. 2 boinc boinc      4096 Jan 24 23:45 shared
[2026-01-24 23:50:39] -rw-r--r--. 2 boinc boinc    597972 Jan 24 23:45 input.tar.gz
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc         0 Jan 24 23:45 boinc_lockfile
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc      2877 Jan 24 23:45 pandaJob.out
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc   1004246 Jan 24 23:46 agis_schedconf.cvmfs.json
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc   1516246 Jan 24 23:46 agis_ddmendpoints.agis.ALL.json
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc       445 Jan 24 23:46 workernode_map.json
[2026-01-24 23:50:39] drwx------. 5 boinc boinc      4096 Jan 24 23:46 pilot3
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc       523 Jan 24 23:47 boinc_task_state.xml
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc      1002 Jan 24 23:48 memory_monitor_summary.json
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc     47512 Jan 24 23:48 log.47947082._005974.job.log.tgz.1
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc      8597 Jan 24 23:50 heartbeat.json
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc        23 Jan 24 23:50 wrapper_checkpoint.txt
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc      8192 Jan 24 23:50 boinc_mmap_file
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc       823 Jan 24 23:50 pilotlog.txt
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc        95 Jan 24 23:50 pilot_heartbeat.json
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc     91479 Jan 24 23:50 log.47947082._005974.job.log.1
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc       186 Jan 24 23:50 output.list
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc       620 Jan 24 23:50 runtime_log
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc    153600 Jan 24 23:50 result.tar.gz
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc      8635 Jan 24 23:50 runtime_log.err
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc       647 Jan 24 23:50 oxDLDmVCS28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn2oKDmAGmx8n.diag
[2026-01-24 23:50:39] -rw-r--r--. 1 boinc boinc     22454 Jan 24 23:50 stderr.txt
[2026-01-24 23:50:39] No HITS result produced
[2026-01-24 23:50:39]  *** Contents of shared directory: ***
[2026-01-24 23:50:39] total 405748
[2026-01-24 23:50:39] -rw-r--r--. 2 boinc boinc 414715478 Jan 24 23:45 ATLAS.root_0
[2026-01-24 23:50:39] -rw-r--r--. 2 boinc boinc     15845 Jan 24 23:45 start_atlas.sh
[2026-01-24 23:50:39] -rw-r--r--. 2 boinc boinc    597972 Jan 24 23:45 input.tar.gz
[2026-01-24 23:50:39] -rw-------. 1 boinc boinc    153600 Jan 24 23:50 result.tar.gz
23:50:41 (1442646): run_atlas exited; CPU time 35.161626
23:50:41 (1442646): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN