Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 07:15:13 (1440): vboxwrapper version 26210
2026-01-26 07:15:13 (1440): BOINC client version: 8.2.8
2026-01-26 07:15:14 (1440): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-26 07:15:14 (1440): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 07:15:14 (1440): Create VM. (boinc_2cd0abb992a583e9, slot#4)
2026-01-26 07:15:15 (1440): Setting Memory Size for VM. (4800MB)
2026-01-26 07:15:15 (1440): Setting CPU Count for VM. (8)
2026-01-26 07:15:15 (1440): Setting Chipset Options for VM.
2026-01-26 07:15:16 (1440): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 07:15:16 (1440): Setting Boot Options for VM.
2026-01-26 07:15:16 (1440): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 07:15:17 (1440): Enabling VM Network Access.
2026-01-26 07:15:17 (1440): Disabling USB Support for VM.
2026-01-26 07:15:17 (1440): Disabling COM Port Support for VM.
2026-01-26 07:15:17 (1440): Disabling LPT Port Support for VM.
2026-01-26 07:15:18 (1440): Disabling Audio Support for VM.
2026-01-26 07:15:18 (1440): Disabling Clipboard Support for VM.
2026-01-26 07:15:18 (1440): Disabling Drag and Drop Support for VM.
2026-01-26 07:15:18 (1440): Adding storage controller(s) to VM.
2026-01-26 07:15:19 (1440): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 07:15:21 (1440): Adding VirtualBox Guest Additions to VM.
2026-01-26 07:15:21 (1440): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 07:15:21 (1440): forwarding host port 52111 to guest port 80
2026-01-26 07:15:22 (1440): Enabling remote desktop for VM.
2026-01-26 07:15:22 (1440): Required extension pack not installed, remote desktop not enabled.
2026-01-26 07:15:22 (1440): Enabling shared directory for VM.
2026-01-26 07:15:22 (1440): Starting VM using VBoxManage interface. (boinc_2cd0abb992a583e9, slot#4)
2026-01-26 07:15:31 (1440): Successfully started VM. (PID = '16544')
2026-01-26 07:15:31 (1440): Reporting VM Process ID to BOINC.
2026-01-26 07:15:31 (1440): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-26 07:15:31 (1440): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 07:15:31 (1440): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 07:15:31 (1440): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 07:15:31 (1440): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 07:15:31 (1440): Detected: Web Application Enabled (http://localhost:52111)
2026-01-26 07:15:31 (1440): Preference change detected
2026-01-26 07:15:31 (1440): Setting CPU throttle for VM. (100%)
2026-01-26 07:15:31 (1440): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 07:15:33 (1440): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 07:15:33 (1440): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 07:15:36 (1440): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 07:15:36 (1440): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 07:15:36 (1440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 07:15:41 (1440): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 07:15:41 (1440): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-26 07:15:48 (1440): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000144 main     Log opened 2026-01-26T07:15:46.561514000Z
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000283 main     OS Product: Linux
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000336 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000382 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000429 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000429 main     Process ID: 1372
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.000430 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 07:15:48 (1440): Guest Log: 00:00:00.002438 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 07:15:48 (1440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 07:15:48 (1440): Guest Log: [INFO] Mounting shared directory
2026-01-26 07:15:48 (1440): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 07:15:55 (1440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 07:15:55 (1440): Guest Log: [INFO] Detected branch: prod
2026-01-26 07:15:56 (1440): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 07:15:56 (1440): Guest Log: Copying input files
2026-01-26 07:15:58 (1440): Guest Log: 00:00:10.006364 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 878 285 000ns (GuestNow=1 769 429 757 443 996 000 ns GuestLast=1 769 411 746 565 711 000 ns fSetTimeLastLoop=true )
2026-01-26 07:15:59 (1440): Guest Log: Copied input files into RunAtlas.
2026-01-26 07:15:59 (1440): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-26 07:15:59 (1440): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-26 07:15:59 (1440): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-26 07:15:59 (1440): Guest Log: Further information can be found at the LHC@home message board.
2026-01-26 07:16:08 (1440): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 07:16:08 (1440): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 07:16:08 (1440): Guest Log: 2.6.3.0 1652 0 32152 155545 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-26 07:16:09 (1440): Guest Log: copied the webapp to /var/www
2026-01-26 07:16:09 (1440): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-26 07:16:09 (1440): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-26 07:16:09 (1440): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 07:16:09 (1440): Guest Log:  *** Starting ATLAS job. (PandaID=6982020480 taskID=48310840) ***
2026-01-26 07:35:08 (1440): VM state change detected. (old = 'running', new = 'paused')
2026-01-26 08:55:41 (1440): Guest Log: 00:19:20.807871 timesync vgsvcTimeSyncWorker: Radical host time change: 4 843 556 000 000ns (HostNow=1 769 435 741 797 000 000 ns HostLast=1 769 430 898 241 000 000 ns)
2026-01-26 08:55:41 (1440): VM state change detected. (old = 'paused', new = 'running')
2026-01-26 08:55:51 (1440): Guest Log: 00:19:30.808185 timesync vgsvcTimeSyncWorker: Radical guest time change: 4 843 553 385 000ns (GuestNow=1 769 435 751 797 939 000 ns GuestLast=1 769 430 908 244 554 000 ns fSetTimeLastLoop=true )
2026-01-26 10:16:19 (1440): Status Report: Elapsed Time: '6000.000000'
2026-01-26 10:16:19 (1440): Status Report: CPU Time: '37011.687500'
2026-01-26 10:56:09 (1440): VM state change detected. (old = 'running', new = 'paused')
2026-01-26 13:01:16 (1440): VM state change detected. (old = 'paused', new = 'running')
2026-01-26 13:01:20 (1440): Guest Log: 02:19:52.044109 timesync vgsvcTimeSyncWorker: Radical host time change: 7 517 701 000 000ns (HostNow=1 769 450 480 714 000 000 ns HostLast=1 769 442 963 013 000 000 ns)
2026-01-26 13:01:30 (1440): Guest Log: 02:20:02.066732 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 517 704 794 000ns (GuestNow=1 769 450 490 737 479 000 ns GuestLast=1 769 442 973 032 685 000 ns fSetTimeLastLoop=true )
2026-01-26 14:01:40 (1440): Status Report: Elapsed Time: '12000.000000'
2026-01-26 14:01:40 (1440): Status Report: CPU Time: '72942.734375'
2026-01-26 14:04:58 (1440): Guest Log:  *** Job finished ***
2026-01-26 14:04:58 (1440): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:39,095 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:39,095 | INFO     | traces error code: 0
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:39,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:54,106 | INFO     | 24317s have passed since pilot start - server update state is 'UPDATING_FINAL'
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,360 | INFO     | PID=6125 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,361 | INFO     | found 0 job(s) in 20 queues
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,362 | INFO     | [monitor] control thread has ended
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,472 [wrapper] ==== pilot stdout END ====
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,481 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,490 [wrapper] pilotpid: 6125
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,495 [wrapper] Pilot exit status: 0
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,809 [wrapper] pandaids: 6982020480
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,851 [wrapper] cleanup supervisor_pilot 27868 6126
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,886 [wrapper] Test setup, not cleaning
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,891 [wrapper] apfmon messages muted
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,896 [wrapper] ==== wrapper stdout END ====
2026-01-26 14:04:58 (1440): Guest Log: 2026-01-26 19:04:55,902 [wrapper] ==== wrapper stderr END ====
2026-01-26 14:04:58 (1440): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 14:04:58 (1440): Guest Log:     "exeErrorCode": 0,
2026-01-26 14:04:58 (1440): Guest Log:     "exeErrorDiag": "",
2026-01-26 14:04:58 (1440): Guest Log:     "pilotErrorCode": 0,
2026-01-26 14:04:58 (1440): Guest Log:     "pilotErrorDiag": "",
2026-01-26 14:04:58 (1440): Guest Log:  *** Listing of results directory ***
2026-01-26 14:04:58 (1440): Guest Log: total 198564
2026-01-26 14:04:58 (1440): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 24 21:55 runpilot2-wrapper.sh
2026-01-26 14:04:58 (1440): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 24 21:59 pilot3.tar.gz
2026-01-26 14:04:58 (1440): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 24 21:59 queuedata.json
2026-01-26 14:04:58 (1440): Guest Log: -rwxr-xr-x. 1 atlas atlas     11295 Jan 26 12:15 init_data.xml
2026-01-26 14:04:58 (1440): Guest Log: -rwxr-xr-x. 1 atlas atlas    597760 Jan 26 12:15 input.tar.gz
2026-01-26 14:04:58 (1440): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 12:15 start_atlas.sh
2026-01-26 14:04:58 (1440): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 12:15 EVNT.48310836._000037.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 14:04:58 (1440): Guest Log: -rw-r--r--. 1 atlas atlas      2501 Jan 26 12:16 pandaJob.out
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas   1002189 Jan 26 12:19 agis_schedconf.cvmfs.json
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas       428 Jan 26 12:19 workernode_map.json
2026-01-26 14:04:58 (1440): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 12:19 pilot3
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas 195242324 Jan 26 19:03 HITS.48310840._001730.pool.root.1
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas      1035 Jan 26 19:04 memory_monitor_summary.json
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 19:04 agis_ddmendpoints.agis.ALL.json
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas    450805 Jan 26 19:04 log.48310840._001730.job.log.tgz.1
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas      6381 Jan 26 19:04 heartbeat.json
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas       860 Jan 26 19:04 pilotlog.txt
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas        97 Jan 26 19:04 pilot_heartbeat.json
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas   1658777 Jan 26 19:04 log.48310840._001730.job.log.1
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 19:04 output.list
2026-01-26 14:04:58 (1440): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 19:04 runtime_log
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas   2129920 Jan 26 19:04 result.tar.gz
2026-01-26 14:04:58 (1440): Guest Log: -rw-r--r--. 1 atlas atlas      8767 Jan 26 19:04 runtime_log.err
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas       664 Jan 26 19:04 CZHLDmxm038n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSXzKDmHTzChn.diag
2026-01-26 14:04:58 (1440): Guest Log: Looking for outputfile HITS.48310840._001730.pool.root.1
2026-01-26 14:04:58 (1440): Guest Log: HITS file was successfully produced
2026-01-26 14:04:58 (1440): Guest Log: -rw-------. 1 atlas atlas 195242324 Jan 26 19:03 /home/atlas/RunAtlas/HITS.48310840._001730.pool.root.1
2026-01-26 14:05:00 (1440): Guest Log: Successfully finished the ATLAS job!
2026-01-26 14:05:00 (1440): Guest Log: Copying the results back to the shared directory!
2026-01-26 14:05:00 (1440): Guest Log:  *** Contents of shared directory: ***
2026-01-26 14:05:00 (1440): Guest Log: total 713996
2026-01-26 14:05:00 (1440): Guest Log: -rwxrwxrwx. 1 root root 533127603 Jan 26 12:15 ATLAS.root_0
2026-01-26 14:05:00 (1440): Guest Log: -rwxrwxrwx. 1 root root 195242324 Jan 26 19:05 HITS.pool.root.1
2026-01-26 14:05:00 (1440): Guest Log: -rwxrwxrwx. 1 root root     11295 Jan 26 12:15 init_data.xml
2026-01-26 14:05:00 (1440): Guest Log: -rwxrwxrwx. 1 root root    597760 Jan 25 07:43 input.tar.gz
2026-01-26 14:05:00 (1440): Guest Log: -rwxrwxrwx. 1 root root   2129920 Jan 26 19:05 result.tar.gz
2026-01-26 14:05:00 (1440): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 07:43 start_atlas.sh
2026-01-26 14:05:00 (1440): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 14:05:00 (1440): VM Completion File Detected.
2026-01-26 14:05:00 (1440): Powering off VM.
2026-01-26 14:05:01 (1440): Successfully stopped VM.
2026-01-26 14:05:01 (1440): Deregistering VM. (boinc_2cd0abb992a583e9, slot#4)
2026-01-26 14:05:01 (1440): Removing network bandwidth throttle group from VM.
2026-01-26 14:05:01 (1440): Removing VM from VirtualBox.
2026-01-26 14:05:07 (1440): called boinc_finish(0)

</stderr_txt>
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