Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 16:42:48 (8184): vboxwrapper version 26210
2026-01-25 16:42:48 (8184): BOINC client version: 7.16.11
2026-01-25 16:42:48 (8184): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-25 16:42:49 (8184): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 16:42:49 (8184): Create VM. (boinc_0452ab94a482ee89, slot#9)
2026-01-25 16:42:50 (8184): Setting Memory Size for VM. (4800MB)
2026-01-25 16:42:50 (8184): Setting CPU Count for VM. (8)
2026-01-25 16:42:50 (8184): Setting Chipset Options for VM.
2026-01-25 16:42:51 (8184): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 16:42:51 (8184): Setting Boot Options for VM.
2026-01-25 16:42:52 (8184): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 16:42:52 (8184): Enabling VM Network Access.
2026-01-25 16:42:53 (8184): Disabling USB Support for VM.
2026-01-25 16:42:53 (8184): Disabling COM Port Support for VM.
2026-01-25 16:42:53 (8184): Disabling LPT Port Support for VM.
2026-01-25 16:42:53 (8184): Disabling Audio Support for VM.
2026-01-25 16:42:54 (8184): Disabling Clipboard Support for VM.
2026-01-25 16:42:54 (8184): Disabling Drag and Drop Support for VM.
2026-01-25 16:42:54 (8184): Adding storage controller(s) to VM.
2026-01-25 16:42:54 (8184): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 16:42:56 (8184): Adding VirtualBox Guest Additions to VM.
2026-01-25 16:42:56 (8184): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 16:42:56 (8184): forwarding host port 51360 to guest port 80
2026-01-25 16:42:56 (8184): Enabling remote desktop for VM.
2026-01-25 16:42:57 (8184): Enabling shared directory for VM.
2026-01-25 16:42:58 (8184): Starting VM using VBoxManage interface. (boinc_0452ab94a482ee89, slot#9)
2026-01-25 16:43:07 (8184): Successfully started VM. (PID = '16240')
2026-01-25 16:43:07 (8184): Reporting VM Process ID to BOINC.
2026-01-25 16:43:07 (8184): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-25 16:43:07 (8184): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 16:43:07 (8184): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-25 16:43:07 (8184): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 16:43:07 (8184): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 16:43:07 (8184): Detected: Web Application Enabled (http://localhost:51360)
2026-01-25 16:43:07 (8184): Detected: Remote Desktop Enabled (localhost:51361)
2026-01-25 16:43:07 (8184): Preference change detected
2026-01-25 16:43:07 (8184): Setting CPU throttle for VM. (100%)
2026-01-25 16:43:07 (8184): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 16:43:09 (8184): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 16:43:09 (8184): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 16:43:15 (8184): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 16:43:15 (8184): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 16:43:15 (8184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 16:43:28 (8184): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 16:43:28 (8184): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-25 16:43:51 (8184): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000254 main     Log opened 2026-01-25T16:43:50.018174000Z
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000477 main     OS Product: Linux
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000539 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000589 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000638 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000639 main     Process ID: 1374
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.000641 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 16:43:51 (8184): Guest Log: 00:00:00.002131 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 16:43:52 (8184): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 16:43:52 (8184): Guest Log: [INFO] Mounting shared directory
2026-01-25 16:43:52 (8184): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 16:44:01 (8184): Guest Log: 00:00:10.005323 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 501 681 000ns (GuestNow=1 769 355 841 520 760 000 ns GuestLast=1 769 359 430 022 441 000 ns fSetTimeLastLoop=true )
2026-01-25 16:44:02 (8184): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 16:44:02 (8184): Guest Log: [INFO] Detected branch: prod
2026-01-25 16:44:03 (8184): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 16:44:03 (8184): Guest Log: Copying input files
2026-01-25 16:44:11 (8184): Guest Log: Copied input files into RunAtlas.
2026-01-25 16:44:11 (8184): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 16:44:11 (8184): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 16:44:11 (8184): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 16:44:11 (8184): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 16:44:24 (8184): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 16:44:25 (8184): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 16:44:25 (8184): Guest Log: 2.6.3.0 1652 0 30168 155513 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 16:44:30 (8184): Guest Log: copied the webapp to /var/www
2026-01-25 16:44:30 (8184): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-25 16:44:30 (8184): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-25 16:44:30 (8184): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 16:44:30 (8184): Guest Log:  *** Starting ATLAS job. (PandaID=6982021106 taskID=48310826) ***
2026-01-25 16:54:34 (8184): VM state change detected. (old = 'running', new = 'paused')
2026-01-25 17:41:08 (8184): VM state change detected. (old = 'paused', new = 'running')
2026-01-25 17:41:16 (8184): Guest Log: 00:10:50.233652 timesync vgsvcTimeSyncWorker: Radical host time change: 2 804 796 000 000ns (HostNow=1 769 359 276 543 000 000 ns HostLast=1 769 356 471 747 000 000 ns)
2026-01-25 17:41:26 (8184): Guest Log: 00:11:00.235355 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 804 796 273 000ns (GuestNow=1 769 359 286 544 827 000 ns GuestLast=1 769 356 481 748 554 000 ns fSetTimeLastLoop=true )
2026-01-25 19:10:18 (8184): Status Report: Elapsed Time: '6000.011017'
2026-01-25 19:10:18 (8184): Status Report: CPU Time: '35464.171875'
2026-01-25 20:50:59 (8184): Status Report: Elapsed Time: '12000.011017'
2026-01-25 20:50:59 (8184): Status Report: CPU Time: '77910.328125'
2026-01-25 22:24:53 (8184): Guest Log:  *** Job finished ***
2026-01-25 22:24:53 (8184): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:27,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:27,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:45,005 | INFO     | [monitor] cgroup control has ended
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:45,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257166493504)>', '<ExcThread(monitor, started 140255965468416)>']
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:46,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:46,295 | INFO     | [monitor] control thread has ended
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,346 | INFO     | all workflow threads have been joined
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,346 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,347 | INFO     | traces error code: 0
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,527 [wrapper] ==== pilot stdout END ====
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,533 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,539 [wrapper] pilotpid: 6112
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,546 [wrapper] Pilot exit status: 0
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,822 [wrapper] pandaids: 6982021106
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,877 [wrapper] cleanup supervisor_pilot 29600 6113
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,884 [wrapper] Test setup, not cleaning
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,896 [wrapper] apfmon messages muted
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,903 [wrapper] ==== wrapper stdout END ====
2026-01-25 22:24:53 (8184): Guest Log: 2026-01-25 21:24:50,909 [wrapper] ==== wrapper stderr END ====
2026-01-25 22:24:53 (8184): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 22:24:53 (8184): Guest Log:     "exeErrorCode": 0,
2026-01-25 22:24:53 (8184): Guest Log:     "exeErrorDiag": "",
2026-01-25 22:24:53 (8184): Guest Log:     "pilotErrorCode": 0,
2026-01-25 22:24:53 (8184): Guest Log:     "pilotErrorDiag": "",
2026-01-25 22:24:53 (8184): Guest Log:  *** Listing of results directory ***
2026-01-25 22:24:54 (8184): Guest Log: total 188528
2026-01-25 22:24:54 (8184): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 24 21:55 runpilot2-wrapper.sh
2026-01-25 22:24:54 (8184): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 24 21:59 pilot3.tar.gz
2026-01-25 22:24:54 (8184): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 24 21:59 queuedata.json
2026-01-25 22:24:54 (8184): Guest Log: -rwxr-xr-x. 1 atlas atlas     10614 Jan 25 15:44 init_data.xml
2026-01-25 22:24:54 (8184): Guest Log: -rwxr-xr-x. 1 atlas atlas    597763 Jan 25 15:44 input.tar.gz
2026-01-25 22:24:54 (8184): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 15:44 start_atlas.sh
2026-01-25 22:24:54 (8184): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 15:44 EVNT.48310824._000049.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 22:24:54 (8184): Guest Log: -rw-r--r--. 1 atlas atlas      2522 Jan 25 15:44 pandaJob.out
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas   1004238 Jan 25 15:46 agis_schedconf.cvmfs.json
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas       428 Jan 25 15:46 workernode_map.json
2026-01-25 22:24:54 (8184): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 15:46 pilot3
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas 183425371 Jan 25 21:22 HITS.48310826._006475.pool.root.1
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas      1038 Jan 25 21:23 memory_monitor_summary.json
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 21:23 agis_ddmendpoints.agis.ALL.json
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas    507412 Jan 25 21:23 log.48310826._006475.job.log.tgz.1
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas      6390 Jan 25 21:23 heartbeat.json
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas        97 Jan 25 21:24 pilot_heartbeat.json
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 25 21:24 pilotlog.txt
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas   2368851 Jan 25 21:24 log.48310826._006475.job.log.1
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 21:24 output.list
2026-01-25 22:24:54 (8184): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 21:24 runtime_log
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas   2897920 Jan 25 21:24 result.tar.gz
2026-01-25 22:24:54 (8184): Guest Log: -rw-r--r--. 1 atlas atlas      8740 Jan 25 21:24 runtime_log.err
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas       656 Jan 25 21:24 4qVMDmmm038nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm265KDm843xCo.diag
2026-01-25 22:24:54 (8184): Guest Log: Looking for outputfile HITS.48310826._006475.pool.root.1
2026-01-25 22:24:54 (8184): Guest Log: HITS file was successfully produced
2026-01-25 22:24:54 (8184): Guest Log: -rw-------. 1 atlas atlas 183425371 Jan 25 21:22 /home/atlas/RunAtlas/HITS.48310826._006475.pool.root.1
2026-01-25 22:24:56 (8184): Guest Log: Successfully finished the ATLAS job!
2026-01-25 22:24:56 (8184): Guest Log: Copying the results back to the shared directory!
2026-01-25 22:24:56 (8184): Guest Log:  *** Contents of shared directory: ***
2026-01-25 22:24:56 (8184): Guest Log: total 670264
2026-01-25 22:24:56 (8184): Guest Log: -rwxrwxrwx. 1 root root 499394563 Jan 25 15:42 ATLAS.root_0
2026-01-25 22:24:56 (8184): Guest Log: -rwxrwxrwx. 1 root root 183425371 Jan 25 21:24 HITS.pool.root.1
2026-01-25 22:24:56 (8184): Guest Log: -rwxrwxrwx. 1 root root     10614 Jan 25 15:42 init_data.xml
2026-01-25 22:24:56 (8184): Guest Log: -rwxrwxrwx. 1 root root    597763 Jan 25 08:13 input.tar.gz
2026-01-25 22:24:56 (8184): Guest Log: -rwxrwxrwx. 1 root root   2897920 Jan 25 21:24 result.tar.gz
2026-01-25 22:24:56 (8184): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 25 08:13 start_atlas.sh
2026-01-25 22:24:56 (8184): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 22:24:56 (8184): VM Completion File Detected.
2026-01-25 22:24:56 (8184): Powering off VM.
2026-01-25 22:25:02 (8184): Successfully stopped VM.
2026-01-25 22:25:02 (8184): Deregistering VM. (boinc_0452ab94a482ee89, slot#9)
2026-01-25 22:25:02 (8184): Removing network bandwidth throttle group from VM.
2026-01-25 22:25:03 (8184): Removing VM from VirtualBox.
2026-01-25 22:25:09 (8184): called boinc_finish(0)

</stderr_txt>
]]>

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